[Freesurfer] Plot Histograms
Hi! I would like to plot an histogram with values from sig.mgh across all cortical mantle (as represented in qdec or in tksurfer-overlay options). Which function would allow me to obtain/create histograms from *mgh files? I also would like to obtain a similar histogram, but restricted to a cortical label. How I could do that? Thanks in advance -- Dídac Vidal Piñeiro Dept. Psychiatry and Clinical Psychobiology Faculty of Medicine University of barcelona ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
[Freesurfer] installing freesurfer on mac
Hi, I am trying to install freesurfer on my mac, and I got a license key, which I need to save as .license file. However, the mac is not allowing me to do so. I tried saving the file in linux and importing to the mac but this failed too. I also tried saving it as freesurfer.license instead of just .license but I get the error: [Charmaines-MacBook-Pro:/Applications/freesurfer] Charm% tkmedit bert orig.mgz Couldn't create output file .xdebug_tkmedit-- ERROR: FreeSurfer license file /Applications/freesurfer/.license not found. Any ideas? Thanks very much, Best, Charmaine --- Charmaine Demanuele, Ph.D. Psychiatric Neuroimaging Athinoula A. Martinos Center for Biomedical Imaging Harvard Medical School 149 13th Street Charlestown Navy Yard Charlestown, MA 02129 phone: +1617-724-3170 email: cha...@nmr.mgh.harvard.edu tel:617-726-4078 ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Re: [Freesurfer] per voxel regressor in LME toolbox?
The lme toolbox allows you to have different regression models across locations. If there is a missed data value at some location (vertex/voxel) for a given time-point for a given subject then you can exclude the corresponding row of the full design matrix at that location using the parameter Xrows of : [stats,st] = lme_mass_fit_vw(X,Zcols,Y,ni,maskvtx,fname,prs,e,Xrows) This allows you to use a different number of rows from your design matrix across locations. Xrows is just a matrix of zeros and ones. Look at the header of lme_mass_fit_vw for more info. If you also want to have a different number of columns from your maximal model design matrix (this the design mtrix for the model that contains the maximum number of regressors you are going to use at any location) then you need to work directly with [stats,st] = lme_mass_fit(X,Xcols,Xrows,Zcols,Y,ni) (this script is call by lme_mass_fit_vw) Look at the header of this script for more info. The parameter Xcols is a matrix of zeros and ones that allows you to choose a different subset of columns from your “maximal design matrix” at each location. Hope this makes sense. Best -Jorge El Miércoles 30 de abril de 2014 18:47, Marnie Shaw marnie.s...@anu.edu.au escribió: Dear Freesurfers, Is there a way to include a per voxel regressor in an LME model within the matlab LME toolbox? Just like you can do with mri_glmfit? Cheers, Marnie ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Re: [Freesurfer] installing freesurfer on mac
Hi Charmaine, Sounds like you just need to change the folder permissions for, /Applications/freesurfer/ before attempting to copy the .license file to that location. -Louis On Thu, 1 May 2014, Demanuele, Charmaine wrote: Hi, I am trying to install freesurfer on my mac, and I got a license key, which I need to save as .license file. However, the mac is not allowing me to do so. I tried saving the file in linux and importing to the mac but this failed too. I also tried saving it as freesurfer.license instead of just .license but I get the error: [Charmaines-MacBook-Pro:/Applications/freesurfer] Charm% tkmedit bert orig.mgz Couldn't create output file .xdebug_tkmedit-- ERROR: FreeSurfer license file /Applications/freesurfer/.license not found. Any ideas? Thanks very much, Best, Charmaine --- Charmaine Demanuele, Ph.D. Psychiatric Neuroimaging Athinoula A. Martinos Center for Biomedical Imaging Harvard Medical School 149 13th Street Charlestown Navy Yard Charlestown, MA 02129 phone: +1617-724-3170 email: cha...@nmr.mgh.harvard.edu ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
[Freesurfer] NIH Staff Scientist Position available, Bethesda, MD, USA
Posted on behalf of the CPB: Department of Health and Human Services (DHHS) National Institutes of Health (NIH) National Institute of Mental Health (NIMH) Division of Intramural Research Programs (DIRP) Section on Childhood Neuropsychiatric Disorders (SCND) Child Psychiatry Branch (CPB) Staff Scientist The Child Psychiatry Branch, in Bethesda, Maryland, is recruiting applicants for a Staff Scientist position. As a Staff Scientist, the primary duties will include conducting statistical analyses on clinical, neurobiological and treatment studies carried out in the Branch. This includes but is not limited to tasks such as maintaining the appropriate data sets, clearly conveying statistical results and methods both orally and in writing, reviewing and writing statistical content for manuscripts prior to submission, and working closely with and providing statistical support for all Branch members. The Staff Scientist position entails 25% time allotted to pursuing individual research interests. The Child Psychiatry Branch is a highly productive and collaborative group with a rich, multimodal dataset that seeks to understand neurodevelopmental disorders, with a focus on childhood-onset schizophrenia. There is a strong scientific and statistical computing core facility in existence, which can benefit this work. For more information about the Child Psychiatry Branch, please utilize the following link: http://www.nimh.nih.gov/labs-at-nimh/research-areas/clinics-and-labs/chp/in dex.shtml Interested candidates must have five years post-doctoral experience. Applicants should have a strong background in statistics and programming/computer science, as well as interests and experience in neuroimaging and behavioral research. The recruit should be adept at writing his/her own code to clean, organize, analyze, and visualize data. Unix and python programming skills are also preferable. In addition some highly desirable skills include: experience analyzing structural MRI, functional MRI and/or MEG data; a solid foundation in multivariate statistics (e.g., cluster analysis, principal components analysis, independent components analysis), and a background in longitudinal data analysis (e.g., mixed model regression/hierarchical linear modeling); proficiency in statistical programs such as R and MATLAB and visualization methods. SALARY RANGE: Salary is commensurate with experience and accomplishments. BENEFITS: The federal government offers a comprehensive benefits package including vacation, sick leave, holidays, life insurance, health benefits, and participation in the Federal Employees Retirement System. For more information go to new employee benefits at the NIH (http://hr.od.nih.gov/Benefits/permanentemployee.htm) and other employee benefits information (http://tiny.cc/saVcr). Interested applicants should send their CV and cover letter to Dr. Judith Rapoport, NIMH, 10 Center Drive, Bldg. 10, Rm. 3N202 (MSC-1600), Bethesda, MD 20892 USA, or by email: rapop...@mail.nih.govmailto:rapop...@mail.nih.gov SUBMISSION DEADLINE: June 1, 2014 NIH and DHHS are Equal Opportunity Employers. ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Re: [Freesurfer] cortical thickness limit
Hi Hayyah that's to prevent outliers corrupting the thickness data. You can rerun mris_thickness with -max N to change 5 to whatever N you want cheers Bruce On Thu, 1 May 2014, Hayyah Clairman wrote: Hello, I have done some comparative cortical thickness analyses in children using FreeSurfer and noticed that the maximum regional thickness value is 5.0. I was wondering if there is an explanation for this limit. Perhaps this is because FreeSurfer was designed for adults? Thank you, Hayyah This e-mail may contain confidential, personal and/or health information(information which may be subject to legal restrictions on use, retention and/or disclosure) for the sole use of the intended recipient. Any review or distribution by anyone other than the person for whom it was originally intended is strictly prohibited. If you have received this e-mail in error, please contact the sender and delete all copies. ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
[Freesurfer] cortical thickness limit
Hello, I have done some comparative cortical thickness analyses in children using FreeSurfer and noticed that the maximum regional thickness value is 5.0. I was wondering if there is an explanation for this limit. Perhaps this is because FreeSurfer was designed for adults? Thank you, Hayyah This e-mail may contain confidential, personal and/or health information(information which may be subject to legal restrictions on use, retention and/or disclosure) for the sole use of the intended recipient. Any review or distribution by anyone other than the person for whom it was originally intended is strictly prohibited. If you have received this e-mail in error, please contact the sender and delete all copies. ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
[Freesurfer] Constraining fMRI data with a surface label generates a bfloat file?
Hello Freesurfer Experts, Using func2roi (in stable3), we constrained our functional data with specific surface labels and t thresholds, and over-threshold masks were outputted as .bfloat files. Does this mean these masks are in volume format and that the volumetric functional data was mapped to the surface but then back to the volume again when the mask was created? We would now like to project these masks onto the fsaverage brain (for viewing). Can you please let me know how this may be accomplished? It seems mri_convert can not transpose .bfloat to .label, but I imagine there is a way! Thank you again for the help. Jacob ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Re: [Freesurfer] Constraining fMRI data with a surface label generates a bfloat file?
On 5/1/14 3:59 PM, jaco...@nmr.mgh.harvard.edu wrote: Hello Freesurfer Experts, Using func2roi (in stable3), we constrained our functional data with specific surface labels and t thresholds, and over-threshold masks were outputted as .bfloat files. Does this mean these masks are in volume format and that the volumetric functional data was mapped to the surface but then back to the volume again when the mask was created? I have no idea. It has been too long. Try looking at it with tkmedit. We would now like to project these masks onto the fsaverage brain (for viewing). Can you please let me know how this may be accomplished? It seems mri_convert can not transpose .bfloat to .label, but I imagine there is a way! You can use mri_vol2surf then mri_surf2surf doug Thank you again for the help. Jacob ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Re: [Freesurfer] Rendering in 3ds Max?
Hi Dorian, I have tried exporting in .STL with success. 3d max can import this format. If I recall corretly the command was mris_convert ?h.pial ?h_pial.stl Cheers, Sourena On 4/29/14, Dorian P. alb@gmail.com wrote: Hi list, Anybody has ever tried to bring Freesurfer pial surfaces for render in 3D studio max? I would be curious on the procedure to follow, more specifically on which file to export/import/convert. Thank you. Dorian TJU -- Sourena Soheili-Nezhad, M.D. Tehran University of Medical Sciences Tehran, Iran Cell: (+98) 912 594 7873 Email1: sourena.sohe...@gmail.com Email2: soheil...@student.tums.ac.ir ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Re: [Freesurfer] Rendering in 3ds Max?
Hi, Have a look at Anderson's blog here http://brainder.org/2014/01/08/splitting-cortical-surface-into-independent-regions/ All the best, Arman Sent from a mobile device, please excuse my brevity/misspellings. On May 2, 2014, at 1:04 AM, Sourena Soheili-Nezhad sourena.sohe...@gmail.com wrote: Hi Dorian, I have tried exporting in .STL with success. 3d max can import this format. If I recall corretly the command was mris_convert ?h.pial ?h_pial.stl Cheers, Sourena On 4/29/14, Dorian P. alb@gmail.com wrote: Hi list, Anybody has ever tried to bring Freesurfer pial surfaces for render in 3D studio max? I would be curious on the procedure to follow, more specifically on which file to export/import/convert. Thank you. Dorian TJU -- Sourena Soheili-Nezhad, M.D. Tehran University of Medical Sciences Tehran, Iran Cell: (+98) 912 594 7873 Email1: sourena.sohe...@gmail.com Email2: soheil...@student.tums.ac.ir ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Re: [Freesurfer] Plot Histograms
you can also histogram surface overlays in tksurfer (and I think in freeview too now) Bruce On Thu, 1 May 2014, Douglas N Greve wrote: There is no such function from the command line. You can load the data in matlab (MRIread.m) and do it there. You can load the cortical label into matlab as well with read_label.m On 05/01/2014 10:27 AM, Dídac Vidal wrote: Hi! I would like to plot an histogram with values from sig.mgh across all cortical mantle (as represented in qdec or in tksurfer-overlay options). Which function would allow me to obtain/create histograms from *mgh files? I also would like to obtain a similar histogram, but restricted to a cortical label. How I could do that? Thanks in advance -- Dídac Vidal Piñeiro Dept. Psychiatry and Clinical Psychobiology Faculty of Medicine University of barcelona ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Re: [Freesurfer] Hippocampal subfields on 1.5 Tesla
Hi Josh, the method fits a statistical atlas of the hippocampal subfields to the image data. It is assumed that all subfields other than the fimbria have the same distribution of intensities - because they are all assumed to be gray matter. Therefore, most of the internal boundaries of the hippocampus rely on the prior given by the deformed atlas, which is mostly determined by the global hippocampal shape. Cheers, /Eugenio Juan Eugenio Iglesias Postdoctoral researcher BCBL www.jeiglesias.com www.bcbl.eu Legal disclaimer/Aviso legal/Lege-oharra: www.bcbl.eu/legal-disclaimer - Original Message - From: Joshua Lee jki...@ucdavis.edu To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Sent: Thursday, May 1, 2014 8:03:04 PM Subject: Re: [Freesurfer] Hippocampal subfields on 1.5 Tesla Thanks for the clarification Eugenio. Would saying that it relies on shape instead of surface be more accurate? I would like to understand better. Also, it is good news that there are plans to model the SLRM. Josh - Joshua Lee Doctoral Candidate Department of Psychology Center for Mind and Brain University of California, Davis 530.747.3805 On Mon, Apr 28, 2014 at 12:18 AM, Eugenio Iglesias e.igles...@bcbl.eu wrote: Dear all, the current module in FreeSurfer works with 1mm T1 data, by relying on strong shape priors. So, at this point, feeding the algorithm data from a 3T scanner or a 1.5T scanner is pretty much the same. Joshua, it is indeed inaccurate to say that the method relies on a generated hippocampal surface, but you are definitely right regarding the SLRM: it is not modeled at this point (we have a new version that models it coming out hopefully soon!). Cheers, /Eugenio Juan Eugenio Iglesias Postdoctoral researcher BCBL www.jeiglesias.com www.bcbl.eu Legal disclaimer/Aviso legal/Lege-oharra: www.bcbl.eu/legal-disclaimer - Original Message - From: Joshua Lee jki...@ucdavis.edu To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Sent: Friday, April 25, 2014 2:10:29 AM Subject: Re: [Freesurfer] Hippocampal subfields on 1.5 Tesla Hi Alan, Typically subfields segmentation requires hi-resolution data (e.g. 0.4 x 0.4 mm in-plane resolution). The thickness of a CA subfield typically range between 0.5-1.00 mm, but 1.5 T data does not achieve sub-millimeter resolutions. Further, subfield segmentation typically requires high-contrast data to discern the internal boundaries formed by the stratum radiatum/stratum lacunosum-moleculare (SLRM). I doubt that images produced on a 1.5 T magnet can achieve the necessary contrast. Last, and please someone correct me if what I say is inaccurate, but doesn't the Van Leemput method use statistical priors to apply label probabilities in reference to a generated hippocampal surface? This would imply that the method assigns label probabilities without reference to a subject's SLRM intensity information. For volumetry, I am somewhat skeptical that a method that only relies on a generated surface would be sensitive to group x subfield interactions; especially double dissociations in ! which overall volume/shape of the hippocampus may be similar across groups. That the that was generated from potentially low resolution, low contrast data cannot help the matter. Some may disagree about this though and I'd be interested in hearing what other people think about the matter. In general, I am quite optimistic about automated methods to segment the subfields. Joshua - Joshua K. Lee Doctoral Candidate Department of Psychology Center for Mind and Brain University of California, Davis On Thu, Apr 24, 2014 at 12:24 PM, Alan Francis alandarkene...@gmail.com wrote: Hi Bruce and FreeSurfers: I have received a manuscript to review for possible publication. The authors have used the subfields algorithm on 1.5T scans and obtained a parcellation with values. They have drawn some major conclusions on the basis of the findings. My understanding is that this method can only be done on 3T. Is the 1.5T results valid? Please advice. thanks, Alan Francis ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the
Re: [Freesurfer] problems about extracting specific vertex thickness value and getting a average thickness for a specific mask
Hi all, Looking forward someone can help me. Thanks. All the best. Rujing Zha 2014-05-02 charujing123 发件人:charujing123charujing...@163.com 发送时间:2014-05-01 11:38 主题:[Freesurfer] problems about extracting specific vertex thickness value and getting a average thickness for a specific mask 收件人:freesurfer@nmr.mgh.harvard.edufreesurfer@nmr.mgh.harvard.edu 抄送: Hi FS experts and users I have done the each subjects' surface regestration on fsaverage surface, and merge all of them into a *.mgh. Group analysis is also completed. Now I have two questions: 1,I want to extract the VtxMax vertex number thickness for all subjects. The VtxMax vertex number can be got in the *.sig.cluster.summary file. And it represents the most significant vertex in that cluster. I search my question in google and find these scripts which maybe helpful: for i in `seq 1 $numsubject` do mri_convert --frame $i y.mgh $SUBJECTS_DIR/fsaverage/surf/lh.$i.mgh mris_convert -c $i.mgh $SUBJECTS_DIR/fsaverage/surf/lh.inflated lh.$i.asc done I got the lh.*.asc file and open it. there are five columes in this file: I guess that: first colume is vertex number, the 2nd-4th columes represent MNI coordinates in surface, and the 5th colume is thickness of this vertex. If I want to deal with my 1st question, all I need to get the lh.*.asc file and search the specific vertex number in this file. All of above, is there anything wrong? 2, I created a surface mask, and want to extract the average thickness value in this mask for every subject. How can I complete it? Any reply will be highly appreaciated. Thanks All the best. Rujing Zha 2014-05-01 charujing123 ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.