Thank you so much! Can I also learn what is the difference between the gray matter values in lh.aparc.stats file and the gray matter values from the command below; >> aparcstats2table --subjects S1 S2 S3 --hemi lh --meas >> volume--parc=aparc --tablefile aparc_lh_volume_table.txt > Thanks, --
21 May 2014 tarihinde 18:19 saatinde, Douglas N Greve <gr...@nmr.mgh.harvard.edu> şunları yazdı: > > mostly right, a few corrections below > >> On 05/21/2014 10:35 AM, Buse Merve Ürgen wrote: >> Dear all, >> I want to get the measurements of meancurvature, thickness, white >> matter volume and gray matter volume based on Desikan-Killiay Atlas. >> I would like to learn whether the commands I used to get them are the >> correct ones (in terms of content) & for Desikan Killiany atlas? >> >> *For meancurv: * >> aparcstats2table --hemi lh --subjects S1 S2 S3 --parc aparc --meas >> meancurv -t lh.parc.meancurv.txt > --parc=aparc >> >> *For thickness:* >> aparcstats2table --hemi rh --subjects S1 S2 S3 --parc aparc --meas >> meancurv -t rh.parc.meancurv.txt > Use--parc=aparc --meas thickness -t rh.parc.thickness.txt >> >> *For WM volume:* >> asegstats2table --all-segs --subjects S1 S2 S3 \-t table.wmparc.txt -d >> space --stats wmparc.stats >> >> *For GM volume:* >> aparcstats2table --subjects S1 S2 S3 --hemi lh --meas >> volume--parc=aparc --tablefile aparc_lh_volume_table.txt >> >> Thanks in advance, >> >> >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > -- > Douglas N. Greve, Ph.D. > MGH-NMR Center > gr...@nmr.mgh.harvard.edu > Phone Number: 617-724-2358 > Fax: 617-726-7422 > > Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting > FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 > www.nmr.mgh.harvard.edu/facility/filedrop/index.html > Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it is > addressed. If you believe this e-mail was sent to you in error and the e-mail > contains patient information, please contact the Partners Compliance HelpLine > at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
