Re: [Freesurfer] make_average_subject error
External Email - Use Caution The patch (see text below) only directed me to replace a file in the freesurfer/gcc/lib directory, which I did. Do I also need to replace the make_average_subject and mri_aparc2aseg files in my freesurfer bin? *To patch the existing 6.0.0 release you may need administrator privileges to do the following:* *1) Remove your existing Freeview.app application bundle by sending it to the trash (and then emtying the trash).* * You can also do this from the terminal by cd'ing to the top level ./freesurfer subdirectory and then doing,* * "rm -rf Freeview.app". * *2) Copy the new Freeview.app.zip to where your old Freeview.app was located aund uncompress it (so it becomes* * the replacement Freeview.app in your current freesrufer installation).* *3) Remove ./freesurfer/lib/gcc/lib/libgomp.1.dylib from your existing freesurfer installation.* *4) Copy the ./freesurfer/lib/gcc/lib/libgomp.1.dylib from the patch archive to /freesurfer/lib/gcc/lib in your current* * freesurfer installtion.* *5) Try running the Freeview.app and loading a volume with it.* On Mon, Apr 5, 2021 at 6:43 AM Douglas N. Greve wrote: > It looks like you are still using the old make_average_subject as the time > stamp is from Jan 19, 2017 (same for mri_aparc2aseg). Can you confirm that > those are really the patches? > > On 3/29/2021 12:52 PM, Jordan Mullins wrote: > > External Email - Use Caution > Hi Douglas, > > Just following up on this. Thanks! > > On Wed, Mar 17, 2021 at 6:12 PM Jordan Mullins < > jordan.mull...@email.ucr.edu> wrote: > >> Yes! Results attached. >> >> On Wed, Mar 17, 2021 at 5:54 PM Douglas N. Greve >> wrote: >> >>> >>> Can you run >>> ls -l $FREESURFER_HOME/bin/mri_aparc2aseg >>> $FREESURFER_HOME/bin/make_average_subject >>> and send the result? >>> >>> Also, the result of >>> which mri_aparc2aseg >>> which make_average_subject >>> >>> >>> >>> On 3/17/2021 8:36 PM, Jordan Mullins wrote: >>> >>> External Email - Use Caution >>> Yes, I had seen that report and had downloaded the patch, but still got >>> the same error. Are there any other steps I can take? >>> >>> On Wed, Mar 17, 2021 at 2:59 PM Douglas N. Greve >>> wrote: >>> >>>> This problem is documented (along with a fix) on our release notes >>>> *MailScanner has detected a possible fraud attempt from >>>> "secure-web.cisco.com" claiming to be* >>>> https://secure-web.cisco.com/1YfLt6Uo2POilcp5VVpawd5Rf6iYNbRNnN5p7YWIrXFkgOYzSbUKXWvIkN4VpVQw_G7PRfTa5KGJR2BDD2zO3u9QtkFi3pMaNwBr8iStogzC4Y530jtsRbSvCu04x1CZqLvhJ6DP3nik5TffvKZwcn8dLKc9LptaVEOJ5CVS_qKCcovJHhhWY61DzjwbkYtpxDisIl7eR_04s3JDuj9d8xXPiqn5ffEV1q00I6rgImD3Y4goobWay4h91YA_L4oW8sGXLsfnUKq0X5WtCiWH_gQ/https%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Ffswiki%2FReleaseNotes >>>> <https://secure-web.cisco.com/1-guBCff1jWC1GKEt4a1kTf7-FWdC1pS-TRdvmtUoD4S5H1J9YevmGvFyfqiToxhlWyLk9yd2FL9ynWWyw9qrc4GMYipR_nQh2TsGzvrJem91qDSlnoJGUp3ytyyvEyT2e5q0-T2Fe_vnxBPOY0VICsRivaAxfyjEStvnGMVSnIqi0A2H-XZ1L8c6qkEpahiB8VCJNBXV1NivRiX6xTWyRasWhu0yxn3-RD6-RLySEjmUaCVHSjs3m1Zl3XCSNcbhISIuIENnF2bSSgZiJSOpGg/https%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Ffswiki%2FReleaseNotes> >>>> >>>> >>>> On 3/16/2021 3:39 PM, Jordan Mullins wrote: >>>> >>>> External Email - Use Caution >>>> Yes, I used the make_average_subject command. I've attached a text file >>>> below of the command line and terminal output from my attempt to average >>>> two subjects. I get the same error when I try this with the full sample. >>>> >>>> On Tue, Mar 16, 2021 at 9:12 AM Douglas N. Greve < >>>> dgr...@mgh.harvard.edu> wrote: >>>> >>>>> What command are you using? make_average_subject? Send the command >>>>> line and terminal output >>>>> >>>>> On 3/10/2021 3:53 PM, Jordan Mullins wrote: >>>>> >>>>> External Email - Use Caution >>>>> Hello, >>>>> >>>>> I am trying to create an average subject from a set of subjects, but >>>>> keep getting an error that says "mghRead(mri/norm.mgz, -1): could not open >>>>> file". I've read that several others have solved this issue by installing >>>>> the patch available at *MailScanner has detected a possible fraud >>>>> attempt from "secure-web.cisco.com" claiming to be* >>>>> http://secure-web.cisco.com/1hZOnX5ZyoNBvuPdU7nwHA01_Q0
Re: [Freesurfer] make_average_subject error
External Email - Use Caution Hi Douglas, Just following up on this. Thanks! On Wed, Mar 17, 2021 at 6:12 PM Jordan Mullins wrote: > Yes! Results attached. > > On Wed, Mar 17, 2021 at 5:54 PM Douglas N. Greve > wrote: > >> >> Can you run >> ls -l $FREESURFER_HOME/bin/mri_aparc2aseg >> $FREESURFER_HOME/bin/make_average_subject >> and send the result? >> >> Also, the result of >> which mri_aparc2aseg >> which make_average_subject >> >> >> >> On 3/17/2021 8:36 PM, Jordan Mullins wrote: >> >> External Email - Use Caution >> Yes, I had seen that report and had downloaded the patch, but still got >> the same error. Are there any other steps I can take? >> >> On Wed, Mar 17, 2021 at 2:59 PM Douglas N. Greve >> wrote: >> >>> This problem is documented (along with a fix) on our release notes >>> *MailScanner has detected a possible fraud attempt from >>> "secure-web.cisco.com" claiming to be* >>> https://secure-web.cisco.com/1u1Z-uFR5fxuGqNlR5v1xrK8erCTHmH3u-GMZLm7k-SucWfLQ_ZGnDhkfR3eHFG2BYz4n4fFD_IphMenUgkeHN6_KDGkBXZKw2dD2lXqcIkrJNrRKqNsjFTAiDMC7-z4k6WGP8lSmOzdCyk7vG0ZpBli-I2mTyzQSi7j1Gj3tyHImeatyu_KS1BG54P2UK8RpEowofIba-HUt-sH0P0hjgD0r-L6Z3OxeZBCpegAPyCz8bmz_iKyyhZb4JD8npYtXZzE7pQmEt-icPsvs9i6fvQ/https%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Ffswiki%2FReleaseNotes >>> <https://secure-web.cisco.com/1-guBCff1jWC1GKEt4a1kTf7-FWdC1pS-TRdvmtUoD4S5H1J9YevmGvFyfqiToxhlWyLk9yd2FL9ynWWyw9qrc4GMYipR_nQh2TsGzvrJem91qDSlnoJGUp3ytyyvEyT2e5q0-T2Fe_vnxBPOY0VICsRivaAxfyjEStvnGMVSnIqi0A2H-XZ1L8c6qkEpahiB8VCJNBXV1NivRiX6xTWyRasWhu0yxn3-RD6-RLySEjmUaCVHSjs3m1Zl3XCSNcbhISIuIENnF2bSSgZiJSOpGg/https%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Ffswiki%2FReleaseNotes> >>> >>> >>> On 3/16/2021 3:39 PM, Jordan Mullins wrote: >>> >>> External Email - Use Caution >>> Yes, I used the make_average_subject command. I've attached a text file >>> below of the command line and terminal output from my attempt to average >>> two subjects. I get the same error when I try this with the full sample. >>> >>> On Tue, Mar 16, 2021 at 9:12 AM Douglas N. Greve >>> wrote: >>> >>>> What command are you using? make_average_subject? Send the command line >>>> and terminal output >>>> >>>> On 3/10/2021 3:53 PM, Jordan Mullins wrote: >>>> >>>> External Email - Use Caution >>>> Hello, >>>> >>>> I am trying to create an average subject from a set of subjects, but >>>> keep getting an error that says "mghRead(mri/norm.mgz, -1): could not open >>>> file". I've read that several others have solved this issue by installing >>>> the patch available at *MailScanner has detected a possible fraud >>>> attempt from "secure-web.cisco.com" claiming to be* >>>> http://secure-web.cisco.com/1PFeDAVc139N82htFQiJN3EfkbyA7F5UAzXWNALk8zD7J-ELJBX3mhFTTg1bjNL3feCaiBf4Qu3pMFMD4F8yiNEV4pVgA-MhL1o8NrZMbXzXcNCoBvyDEtQdE1FRVuC2FCurEQF9-QkjKoG52S5y2_sjizkwZRGzs78OOoWeWWXHHdqBPJb7yYYPnvtuylms-MFEz64YdzkufSjRrvgDt-DHvi_6E4nhZiR_8ckN1Eq0YjzIrTrmUmD9v_r_w47fQGF-2q1SEfF9cozdxI0nZAg/http%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Fpub%2Fdist%2Ffreesurfer%2F6.0.0-patch%2F >>>> <http://secure-web.cisco.com/1holHARxUGo27ZLvlj5vX0sbezsRgmRaNdE1T-Z728EASqGjdSamQfU6_udvX8lNDAGu6fMmZJqlcAAuJtuijJsAYfi7M55moSpWy1McHpeqmMGAqqWT-7M-IStYk9Qs2pOnTfoJznpdLsEgVASogVifdHzPfK1t3pQowp_WCXSDaaHhTDzz7qCl-DUbTHTPKKgBhR1NruBOW9_7sIsS86UbWXqE7CaL5hUOQNwrRGh4iX37y5CgC4I9HuJDYQNG_3fPAfLJmyVuWMB5QC4E_jw/http%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Fpub%2Fdist%2Ffreesurfer%2F6.0.0-patch%2F>. >>>> I did this, but continue to get the same error. I'm working with Freesurver >>>> Version 6.0.0 and MacOS Big Sur Version 11.2.3. I've attached the >>>> recon-all.log below, but please let me know if you need additional >>>> information. >>>> >>>> Any insight on this would be appreciated! Thank you! >>>> >>>> Jordan >>>> >>>> -- >>>> *Jordan L. Mullins, B.A.* >>>> Doctoral Student, Department of Psychology >>>> University of California, Riverside >>>> *MailScanner has detected a possible fraud attempt from >>>> "secure-web.cisco.com" claiming to be* >>>> http://secure-web.cisco.com/1fpwAcAdfpPcgXwG26yDXqSP95kASeRHLMrJFeIUyDibUdqUVH2p0VRezzhwnATWC6T9xIybL_yMoJMsNYkzaaVhiVJdvQu1-4tRXyaLHYAOvnAYvGKVrX8cOnPzcAg5idnKgh43DE29cfOdy3c4LUI1r_TID4tgkTklyuy2ABBPRZ2zSpiirU0OI5NjaFLgnMD
Re: [Freesurfer] make_average_subject error
External Email - Use Caution Yes! Results attached. On Wed, Mar 17, 2021 at 5:54 PM Douglas N. Greve wrote: > > Can you run > ls -l $FREESURFER_HOME/bin/mri_aparc2aseg > $FREESURFER_HOME/bin/make_average_subject > and send the result? > > Also, the result of > which mri_aparc2aseg > which make_average_subject > > > > On 3/17/2021 8:36 PM, Jordan Mullins wrote: > > External Email - Use Caution > Yes, I had seen that report and had downloaded the patch, but still got > the same error. Are there any other steps I can take? > > On Wed, Mar 17, 2021 at 2:59 PM Douglas N. Greve > wrote: > >> This problem is documented (along with a fix) on our release notes >> *MailScanner has detected a possible fraud attempt from >> "secure-web.cisco.com" claiming to be* >> https://secure-web.cisco.com/1edBCITcgawUIS-zRnC8VM1AIPGos4K5RQ9rL3tFPx3df0zWA9LCBvL1H4_DJHaFSciy7WmfebtvWLrHGcbubUnd0eIk0-MdxTwgHCWX0AO2eB9J4cHW6QQdHra1Mvp04M2Fx7sxpKkR8oUz8zACU2Kl9T8V_8FO5z_sEtSrkVBAPBuDF71EX-W93lChEOuYSWK41lRyAcD6gB5pqAkn-ZjWIEACCCjohHQ7_CgJLj0vu9EET6uyAb4sBTSYIxvvEkA3jmSfTATDHsXbMvlSMWQ/https%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Ffswiki%2FReleaseNotes >> <https://secure-web.cisco.com/1-guBCff1jWC1GKEt4a1kTf7-FWdC1pS-TRdvmtUoD4S5H1J9YevmGvFyfqiToxhlWyLk9yd2FL9ynWWyw9qrc4GMYipR_nQh2TsGzvrJem91qDSlnoJGUp3ytyyvEyT2e5q0-T2Fe_vnxBPOY0VICsRivaAxfyjEStvnGMVSnIqi0A2H-XZ1L8c6qkEpahiB8VCJNBXV1NivRiX6xTWyRasWhu0yxn3-RD6-RLySEjmUaCVHSjs3m1Zl3XCSNcbhISIuIENnF2bSSgZiJSOpGg/https%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Ffswiki%2FReleaseNotes> >> >> >> On 3/16/2021 3:39 PM, Jordan Mullins wrote: >> >> External Email - Use Caution >> Yes, I used the make_average_subject command. I've attached a text file >> below of the command line and terminal output from my attempt to average >> two subjects. I get the same error when I try this with the full sample. >> >> On Tue, Mar 16, 2021 at 9:12 AM Douglas N. Greve >> wrote: >> >>> What command are you using? make_average_subject? Send the command line >>> and terminal output >>> >>> On 3/10/2021 3:53 PM, Jordan Mullins wrote: >>> >>> External Email - Use Caution >>> Hello, >>> >>> I am trying to create an average subject from a set of subjects, but >>> keep getting an error that says "mghRead(mri/norm.mgz, -1): could not open >>> file". I've read that several others have solved this issue by installing >>> the patch available at *MailScanner has detected a possible fraud >>> attempt from "secure-web.cisco.com" claiming to be* >>> http://secure-web.cisco.com/1t8K97RYlziVlBgu38RYQs4VfxkUfG2F0ku1em0TQ5_1RFDkKaO70Tf-bbv-9bicog71dMMsOeEqFZOdRoXLLKGOKDFCEDkoYVV2b7HXEHVxBHFSRTeyAW2-8iCX0793SDVlup5S8DPrv_JIbUxMynp9-v7rnpZB-dEevY3NhJ3APFQTJ5DdOzd_RbNP5Ue0q2VKTL68vb7kDa2ZGDbiWHV7XrPQ24Z6Nh-4ImyhuKZ1O8yu1igETuDAdD62iBN5sllJ6dMRloPhWdy4xjz-f3w/http%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Fpub%2Fdist%2Ffreesurfer%2F6.0.0-patch%2F >>> <http://secure-web.cisco.com/1holHARxUGo27ZLvlj5vX0sbezsRgmRaNdE1T-Z728EASqGjdSamQfU6_udvX8lNDAGu6fMmZJqlcAAuJtuijJsAYfi7M55moSpWy1McHpeqmMGAqqWT-7M-IStYk9Qs2pOnTfoJznpdLsEgVASogVifdHzPfK1t3pQowp_WCXSDaaHhTDzz7qCl-DUbTHTPKKgBhR1NruBOW9_7sIsS86UbWXqE7CaL5hUOQNwrRGh4iX37y5CgC4I9HuJDYQNG_3fPAfLJmyVuWMB5QC4E_jw/http%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Fpub%2Fdist%2Ffreesurfer%2F6.0.0-patch%2F>. >>> I did this, but continue to get the same error. I'm working with Freesurver >>> Version 6.0.0 and MacOS Big Sur Version 11.2.3. I've attached the >>> recon-all.log below, but please let me know if you need additional >>> information. >>> >>> Any insight on this would be appreciated! Thank you! >>> >>> Jordan >>> >>> -- >>> *Jordan L. Mullins, B.A.* >>> Doctoral Student, Department of Psychology >>> University of California, Riverside >>> *MailScanner has detected a possible fraud attempt from >>> "secure-web.cisco.com" claiming to be* >>> http://secure-web.cisco.com/1dJju8r2CqbsF9UOo8NNjxFOt8vdI4bOA8cevVR_prTQIqLNel7W-Sh8dkakNDG7biWWkDbTV7bPsTwbUkKGnUzmqq6lVYZswG0Ga05gwqYA1LgTlixzJIYwDmOVdmRRl-P0nRFwnYRHIhX0tqQNfIDkuxyOriroB9kld2tQ41EwMxa1veWcRGrctIjIbpgmZ46GPNZzARpbc4T0nb6JGtIqp6X_NHTFSRFmski9mX6qfJriratIEOJzRQgaATRNhnpJy_-8-8llizmtmj2w0sA/http%3A%2F%2Fucrkindlab.com >>> <http://secure-web.cisco.com/1mshZJHsrG2WjtWWNRNV7vunyA6LicMMo4DqXl-CgSaJWwHVpzdDUXsf8sRfvrwwkKf_KCQA4CYMRZs_am6IcPJO32Jd2eKl8shUDgQlOekTOscmE92Qtz70DWtJSOKxC8By5T4JuwEig2QC0e1ectPTPZjOGXa_t8ycn5bPjuoIWCqI8uXn86bmPqLVHkPzX-YRnSkCSbiIVsQ8zLNZ4ZNr58YvZl22BNeoGzuyye1eQfd_y4
Re: [Freesurfer] make_average_subject error
External Email - Use Caution Yes, I had seen that report and had downloaded the patch, but still got the same error. Are there any other steps I can take? On Wed, Mar 17, 2021 at 2:59 PM Douglas N. Greve wrote: > This problem is documented (along with a fix) on our release notes > https://secure-web.cisco.com/1-guBCff1jWC1GKEt4a1kTf7-FWdC1pS-TRdvmtUoD4S5H1J9YevmGvFyfqiToxhlWyLk9yd2FL9ynWWyw9qrc4GMYipR_nQh2TsGzvrJem91qDSlnoJGUp3ytyyvEyT2e5q0-T2Fe_vnxBPOY0VICsRivaAxfyjEStvnGMVSnIqi0A2H-XZ1L8c6qkEpahiB8VCJNBXV1NivRiX6xTWyRasWhu0yxn3-RD6-RLySEjmUaCVHSjs3m1Zl3XCSNcbhISIuIENnF2bSSgZiJSOpGg/https%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Ffswiki%2FReleaseNotes > > > On 3/16/2021 3:39 PM, Jordan Mullins wrote: > > External Email - Use Caution > Yes, I used the make_average_subject command. I've attached a text file > below of the command line and terminal output from my attempt to average > two subjects. I get the same error when I try this with the full sample. > > On Tue, Mar 16, 2021 at 9:12 AM Douglas N. Greve > wrote: > >> What command are you using? make_average_subject? Send the command line >> and terminal output >> >> On 3/10/2021 3:53 PM, Jordan Mullins wrote: >> >> External Email - Use Caution >> Hello, >> >> I am trying to create an average subject from a set of subjects, but keep >> getting an error that says "mghRead(mri/norm.mgz, -1): could not open >> file". I've read that several others have solved this issue by installing >> the patch available at *MailScanner has detected a possible fraud >> attempt from "secure-web.cisco.com" claiming to be* >> http://secure-web.cisco.com/1NjUZjui5nJgDGrr9dhkxnEPaAXJL7_V_mzY5ft38QMMXIUNrwbt0hDfXpnNdIVw6YDNWKsYG29_xZzkXkG_IAio0_6ZDpw8VtjuSS4KBLsHH0buidZityVgEdSth1zZNSjiXLMGTwe1NPXXG7Yrywxpxml_iCMmexbT7IU-Aepmk4V_vww2HFW73PeIb29w0NOeTiyfdU446btUXEH52ORxpTWXrx-B71cYqlhr9RbJmHc5ADwB-cgONz2D6_waMLg8fnTJIPORQf5ktWFciLg/http%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Fpub%2Fdist%2Ffreesurfer%2F6.0.0-patch%2F >> <http://secure-web.cisco.com/1holHARxUGo27ZLvlj5vX0sbezsRgmRaNdE1T-Z728EASqGjdSamQfU6_udvX8lNDAGu6fMmZJqlcAAuJtuijJsAYfi7M55moSpWy1McHpeqmMGAqqWT-7M-IStYk9Qs2pOnTfoJznpdLsEgVASogVifdHzPfK1t3pQowp_WCXSDaaHhTDzz7qCl-DUbTHTPKKgBhR1NruBOW9_7sIsS86UbWXqE7CaL5hUOQNwrRGh4iX37y5CgC4I9HuJDYQNG_3fPAfLJmyVuWMB5QC4E_jw/http%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Fpub%2Fdist%2Ffreesurfer%2F6.0.0-patch%2F>. >> I did this, but continue to get the same error. I'm working with Freesurver >> Version 6.0.0 and MacOS Big Sur Version 11.2.3. I've attached the >> recon-all.log below, but please let me know if you need additional >> information. >> >> Any insight on this would be appreciated! Thank you! >> >> Jordan >> >> -- >> *Jordan L. Mullins, B.A.* >> Doctoral Student, Department of Psychology >> University of California, Riverside >> *MailScanner has detected a possible fraud attempt from >> "secure-web.cisco.com" claiming to be* >> http://secure-web.cisco.com/1Hb5eBrObpHBXZQD2S7ILWEKBRwR7OK46HlRQPn5nJhb1RK-RjdWkJcRfRQ7GXWEg-inGg35_0zu6O99dGJj3Y8PD_juHovVy61Q0FdPx7DqeUdDfAzy_bx4T2i8AtjXYITBt1FTsolPdZrS1JpBSWgnGw-BigkMI1kVhbHJ6nXXolmhIlo9OSpWZpwiDnGkpJgvXuWSpE8G08RHw6izT-f7A09E9Xdfooja5o0AyNaUZ6JfixfKFSdx_Xtr5JP3Ge38Kd3xiqliWRnmLLhvInw/http%3A%2F%2Fucrkindlab.com >> <http://secure-web.cisco.com/1mshZJHsrG2WjtWWNRNV7vunyA6LicMMo4DqXl-CgSaJWwHVpzdDUXsf8sRfvrwwkKf_KCQA4CYMRZs_am6IcPJO32Jd2eKl8shUDgQlOekTOscmE92Qtz70DWtJSOKxC8By5T4JuwEig2QC0e1ectPTPZjOGXa_t8ycn5bPjuoIWCqI8uXn86bmPqLVHkPzX-YRnSkCSbiIVsQ8zLNZ4ZNr58YvZl22BNeoGzuyye1eQfd_y4ENFJHQxgCNS7c9JXTBAX_N76Z_PQM9TFwvJPA/http%3A%2F%2Fucrkindlab.com> >> >> >> ___ >> Freesurfer mailing listfreesur...@nmr.mgh.harvard.edu*MailScanner has >> detected a possible fraud attempt from "secure-web.cisco.com" claiming to >> be* >> https://secure-web.cisco.com/18ekJrFGSKJvrjW_N8XnUIHQ7WEdFV8flsrhGU5xVLbtdoDWAxlJAfeCO39Y_Y7SuZrm5gjV7YKn7QP-BYeoOGCzRp6i_wBOLTjPnCFpLjvlem7x58eSM_tr29537KEjV1db8pZthAkbaxjwjstfRnheTmWQrxmQoQ9qOUjSov2NeAQCi6YVEN-5f-s7Pj1BhccSCJe7ctnccQNr1n8HC30M1vQ04bsqqh9e6hznkkRFHmXsKHdCfsHaSr64SLAXTThxzbc5Hy3jCXnNbuTjE7Q/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer >> >> <https://secure-web.cisco.com/10GU0iklq7S5a2rmbF5WWPuOiSuT2PW57w03wJKzHnXHAaaWd8KsMJi8rngyfKGRQjDmzC1rBydvMO2FJV_gZclLOvvn3AXejxbQk4gqzGftoPot4FME_nPwkB_fGdz2QcM9Cf2U1vXrfu-wTHxwScSA3q38vFLUd_UxDKXnXzl7QgyKmJqjegPnVN_agyvplezM0tk_gZYjRhdB8k-l3VMOjfCR_K-F3hbe-gcdqqEd2CfH4fPrZreUomJC69TkSn9qhGf8Hq2gmD5sNxDJ7Aw/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2
[Freesurfer] make_average_subject error
External Email - Use Caution Hello, I am trying to create an average subject from a set of subjects, but keep getting an error that says "mghRead(mri/norm.mgz, -1): could not open file". I've read that several others have solved this issue by installing the patch available at http://secure-web.cisco.com/1holHARxUGo27ZLvlj5vX0sbezsRgmRaNdE1T-Z728EASqGjdSamQfU6_udvX8lNDAGu6fMmZJqlcAAuJtuijJsAYfi7M55moSpWy1McHpeqmMGAqqWT-7M-IStYk9Qs2pOnTfoJznpdLsEgVASogVifdHzPfK1t3pQowp_WCXSDaaHhTDzz7qCl-DUbTHTPKKgBhR1NruBOW9_7sIsS86UbWXqE7CaL5hUOQNwrRGh4iX37y5CgC4I9HuJDYQNG_3fPAfLJmyVuWMB5QC4E_jw/http%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Fpub%2Fdist%2Ffreesurfer%2F6.0.0-patch%2F. I did this, but continue to get the same error. I'm working with Freesurver Version 6.0.0 and MacOS Big Sur Version 11.2.3. I've attached the recon-all.log below, but please let me know if you need additional information. Any insight on this would be appreciated! Thank you! Jordan -- *Jordan L. Mullins, B.A.* Doctoral Student, Department of Psychology University of California, Riverside http://secure-web.cisco.com/1mshZJHsrG2WjtWWNRNV7vunyA6LicMMo4DqXl-CgSaJWwHVpzdDUXsf8sRfvrwwkKf_KCQA4CYMRZs_am6IcPJO32Jd2eKl8shUDgQlOekTOscmE92Qtz70DWtJSOKxC8By5T4JuwEig2QC0e1ectPTPZjOGXa_t8ycn5bPjuoIWCqI8uXn86bmPqLVHkPzX-YRnSkCSbiIVsQ8zLNZ4ZNr58YvZl22BNeoGzuyye1eQfd_y4ENFJHQxgCNS7c9JXTBAX_N76Z_PQM9TFwvJPA/http%3A%2F%2Fucrkindlab.com recon-all.log Description: Binary data ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
