[Freesurfer] Job: MRI research associate, University of Delaware

[Keith Schneider]

External Email - Use Caution

Research Associate I, Research Office
Pay Grade: 28N

Context of the job:

The Center for Biomedical and Brain Imaging (CBBI, cbbi.udel.edu) at the 
University of Delaware is hiring a research associate.  The CBBI houses a 
research dedicated Siemens Prisma 3T MRI scanner and a Bruker 9.4T small bore 
MRI scanner, as well as TMS and EEG systems compatible with the MRI scanner.  
We are looking for a new member of our growing team.  The CBBI is a university 
core facility that serves over 20 faculty from throughout the university.  

Under the general direction of the Center Manager, this position is responsible 
for supporting the general operation of the facility, including operating MRI 
scanners, completing various Quality Assurance tasks, and providing technical 
and operational support to users and CBBI staff. The Research Associate I will 
be expected to provide onsite coverage and support during evenings and 
weekends, periodically.


Major Responsibilities:

• Uses training and independent judgment to execute day-to-day activities, 
procedures, and research studies, ensuring efficient workflow, and adequate 
care and treatment of research participants and materials.
• Ensures that established Quality Assurance initiatives are followed and 
documented appropriately.
• Provides general operational support to users and CBBI personnel, including 
evenings and weekends, as needed, and coordinates with CBBI staff as necessary 
for vacation coverage and sick leave.
• As needed, will provide operation of the Siemens Prisma 3T MRI and Bruker 
9.4T scanner in compliance with the standard operating procedures of the CBBI, 
maintains a Level 2 safety certification within the CBBI, screens MRI subjects 
for safety, and assists CBBI researchers with exam-related tasks.
• Assists in the use and maintenance of CBBI computers, databases, and 
peripheral equipment.
• Adheres to appropriate data collection systems and procedures, according to 
pre-established research protocol; coordinates and monitors the collection and 
recording of data, as required by established study protocol. Maintains 
compliance to human and animal subject protocols.
• Restocks center supplies and linens.
• Accepts deliveries and notifies researchers of subject arrival, when 
appropriate.
• Performs miscellaneous job-related duties as assigned.


Qualifications:

• Bachelor’s degree in neuroscience, psychology, radiology, radiologic 
technology, healthcare or other related fields.
• Must be able to safely work around animals and strong magnetic fields.
• Ability to follow research methodology and protocol.
• Dependable, reliable, and able to consistently adhere to a schedule.
• Ability to work independently.
• Strong communication and interpersonal skills.
• Ability to work collaboratively in a team environment.
• Demonstrates an understanding and consideration of the differing needs and 
concerns of individuals with varying identities, cultures, and backgrounds.
• Committed to fostering a workplace culture of belonging, where diversity is 
celebrated and equity is a core value.

To apply, visit 
https://secure-web.cisco.com/1lttHPC-DOD5U1wYDMlTAEeIM80FPOG46eLoxuusT6vbn7g58kPcYxA0WVHwXT9bSSFwnVLzJhlTZ5lSxw7fiY3k-L0x_m5RLXa-J0P-UuBL-XdQA1eHT15zZ6Ki9zAd11moKjqPKp21vKa_6GYaSnvh5t4ppes_3q7P4gXKXKKm9CLcoWSbiFQyKH_JXue6M8QgS-cK71DHbmguWw0G0XCt4gqNl9E6vnx7vmqT1ylC5SQqq55O9kQRshLa8nDwozjSVWRjnO-2G5_ugulSuTA/https%3A%2F%2Fcareers.udel.edu%2Fcw%2Fen-us%2Fjob%2F496886%2Fresearch-associate-i-research-office
 

For more information, e-mail Trevor Wigal, CBBI Manager, twi...@udel.edu___
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

[Freesurfer] Job ad: MRI physicist, University of Delaware

[Keith Schneider]

External Email - Use Caution

The Center for Biomedical and Brain Imaging (CBBI) is a core imaging facility 
at the University of Delaware dedicated to scientific research. It is equipped 
with a Siemens Prisma 3T MRI scanner, Bruker 9.4T small bore MRI scanner, and 
MRI-compatible EEG and TMS.  It supports a wide range of scientific 
investigations through imaging of humans, animals and materials.

Under general direction of the CBBI Manager, the MRI Physicist is responsible 
for supporting the operations of the Siemens and Bruker MRI scanners. The MRI 
Physicist is expected to contribute to both research and training efforts that 
will include pulse sequence programming, parameter and image quality 
optimization, protocol design, scanner operation, technical support and user 
training.  The candidate will be expected to maintain a broad knowledge of 
state-of-the-art MRI technology and equipment. The incumbent must have 
excellent communication and organizational skills, the ability to positively 
interact with a diverse group of MRI users, and a strong motivation to learn 
new MRI techniques.

MAJOR RESPONSIBILITIES:

• Pulse sequence programming on Bruker 9.4T and Siemens 3T MRI scanners
• Assist users on appropriate choice and use of coils
• Technical liaison for obtaining sequences or protocols for 
non-standard imaging (e.g. cardiac, musculoskeletal) from Siemens and other 
sites
• File reports as needed for WIP sequences and Siemens MRA
• Ensure data quality from the viewpoint of machine fundamentals
• Technical support 9.4T and 3T scanners
• Protocol design and testing for 9.4T scanner, including imaging of 
live animals and awake animals; as-needed for 3T
• Routine quality assurance for 9.4T and 3T MRI scanners
• Train users, including students, on use of 9.4T and 3T MRI scanners
• Help users optimize pulse sequence parameters to maximize SNR and 
avoid imaging artifacts
• Consult on image analysis, as needed
• Review journals and abstracts to keep abreast of new developments
• Collaborate with ongoing research as needed; may have independent 
research projects if desired
• Consult users about imaging details for manuscript preparation and 
grant applications, as needed
• Perform miscellaneous job-related duties as assigned

QUALIFICATIONS:

• PhD in MR physics or MS with equivalent experience
• expert understanding of MR physics, image acquisition, signal 
processing, imaging processing and image reconstruction
• MR pulse sequence programming
• Experience with Bruker and Siemens MRI scanners
• MRI scanning experience with both humans and animals—willing to 
handle animals
• Ability to design experiments, optimize MRI protocols, troubleshoot 
image artifacts, analyze data, and interpret results
• Knowledge of functional MRI, DTI, MRS, T1/T2 relaxation and perfusion
• Siemens IDEA and ICE certification (or ability to obtain)

Apply here:

https://secure-web.cisco.com/1c9Jl3E0XNuudM_aNdlK8rkHSG9teQq6Jm3ydsQ-Rv8_I_Xd1BYRzjZfdQ9ll3gYZW93j5Zjor-njHCXtgc5tYUffO3YoZvKuI0vDKugEeieSd95sjpNiB5OvYBHcpmRSVFsdR8xbDk5uH3IgJIh0n17I4L-EBGjKOJfpLJkJKHkUJsp-3JmLO4P_7LPTpLaeo0xpRnFrhFKFGCUH3uEvmw865qljNfyodqTPFAODbsjFJHw9mtRYW14rPEKvXSWuALbTcnif9LbdoCc9JMSQjw/https%3A%2F%2Fcareers.udel.edu%2Fcw%2Fen-us%2Fjob%2F496520%2Fmri-physicist-research-office
 
<https://secure-web.cisco.com/1c9Jl3E0XNuudM_aNdlK8rkHSG9teQq6Jm3ydsQ-Rv8_I_Xd1BYRzjZfdQ9ll3gYZW93j5Zjor-njHCXtgc5tYUffO3YoZvKuI0vDKugEeieSd95sjpNiB5OvYBHcpmRSVFsdR8xbDk5uH3IgJIh0n17I4L-EBGjKOJfpLJkJKHkUJsp-3JmLO4P_7LPTpLaeo0xpRnFrhFKFGCUH3uEvmw865qljNfyodqTPFAODbsjFJHw9mtRYW14rPEKvXSWuALbTcnif9LbdoCc9JMSQjw/https%3A%2F%2Fcareers.udel.edu%2Fcw%2Fen-us%2Fjob%2F496520%2Fmri-physicist-research-office>

For further information, contact me.

keith
-
Keith Schneider
Director, Center for Biomedical and Brain Imaging
Professor, Department of Psychological and Brain Sciences
University of Delaware

___
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

[Freesurfer] neuroimaging postdoc position available

[Keith Schneider]

External Email - Use Caution

A post-doctoral position is available with Keith Schneider at the University of 
Delaware http://keith.psych.udel.edu <http://keith.psych.udel.edu/>. The 
position is funded by NEI/NIH to study the subcortical mechanisms of vision, 
audition, attention and dyslexia.

The successful candidate will join a thriving neuroimaging community at the 
University of Delaware.  The Center for Biomedical & Brain Imaging includes a 
Siemens Prisma 3T MRI scanner, simultaneous EEG, TMS, eye-tracking, and a 
Bruker 9.4 T scanner for small animals.

I am looking for a scientist who:

* has experience with fMRI
* has programming experience (e.g. Matlab or Python)
* has an interest in attention, sensory systems, reading and/or neuroimaging 
methods development (acquisition or analysis)

This position is initially for one year but can be renewed as mutually agreed. 
The start date is flexible but can begin immediately.  To inquire, e-mail your 
CV and a PDF of a first-authored journal article to keit...@udel.edu.

The University of Delaware is located in Newark, Delaware, a small college 
town, located along the Northeast Corridor, within 2 hours of New York and 
Washington, DC, and within an hour of Philadelphia and Baltimore.

-----
Keith Schneider
Director, Center for Biomedical & Brain Imaging
Associate Professor, Department of Psychological & Brain Sciences
University of Delaware

___
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

[Freesurfer] Job ad: MRI physicist

[Keith Schneider]

External Email - Use Caution

The Center for Biomedical and Brain Imaging (CBBI) is a core imaging facility 
at the University of Delaware dedicated to scientific research. It is equipped 
with a Siemens Prisma 3T MRI scanner, Bruker 9.4T small bore MRI scanner, TMS, 
and MRI-compatible EEG.  It supports a wide range of scientific investigations 
through imaging of humans, animals and materials.

Under general direction of the CBBI Manager, the MRI Physicist is responsible 
for supporting the operations of the Siemens and Bruker MRI scanners. The MRI 
Physicist is expected to contribute to both research and training efforts that 
will include pulse sequence programming, parameter and image quality 
optimization, protocol design, scanner operation, technical support and user 
training.  The candidate will be expected to maintain a broad knowledge of 
state-of-the-art MRI technology and equipment. The incumbent must have 
excellent communication and organizational skills, the ability to positively 
interact with a diverse group of MRI users, and a strong motivation to learn 
new MRI techniques.

MAJOR RESPONSIBILITIES:

• Pulse sequence programming on Bruker 9.4T and Siemens 3T MRI scanners
• Assist users on appropriate choice and use of coils
• Technical liaison for obtaining sequences or protocols for 
non-standard imaging (e.g. cardiac, musculoskeletal) from Siemens and other 
sites
• File reports as needed for WIP sequences and Siemens MRA
• Ensure data quality from the viewpoint of machine fundamentals
• Technical support 9.4T and 3T scanners
• Protocol design and testing for 9.4T scanner, including imaging of 
live animals and awake animals; as-needed for 3T
• Routine quality assurance for 9.4T and 3T MRI scanners
• Train users, including students, on use of 9.4T and 3T MRI scanners
• Help users optimize pulse sequence parameters to maximize SNR and 
avoid imaging artifacts
• Consult on image analysis, as needed
• Review journals and abstracts to keep abreast of new developments
• Collaborate with ongoing research as needed; may have independent 
research projects if desired
• Consult users about imaging details for manuscript preparation and 
grant applications, as needed
• Perform miscellaneous job-related duties as assigned

QUALIFICATIONS:

• PhD in MR physics or MS with equivalent experience
• expert understanding of MR physics, image acquisition, signal 
processing, imaging processing and image reconstruction
• MR pulse sequence programming
• Experience with Bruker and Siemens MRI scanners
• MRI scanning experience with both humans and animals—willing to 
handle animals
• Ability to design experiments, optimize MRI protocols, troubleshoot 
image artifacts, analyze data, and interpret results
• Knowledge of functional MRI, DTI, MRS, T1/T2 relaxation and perfusion
• Siemens IDEA and ICE certification (or ability to obtain)

http://careers.udel.edu/cw/en-us/job/493998/mri-physicist-research-office 
<http://careers.udel.edu/cw/en-us/job/493998/mri-physicist-research-office>

For further information, contact me.

keith
-
Keith Schneider
Director, Center for Biomedical and Brain Imaging
Associate Professor
Department of Psychological and Brain Sciences
University of Delaware

___
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

[Freesurfer] Job ad: small animal MRI faculty position

[Keith Schneider]

External Email - Use Caution

Associate Professor, Behavioral Neuroscience
University of Delaware: College of Arts & Sciences: Psychological & Brain 
Sciences
Location: Newark, DE
The University of Delaware invites applications for a tenured associate 
professor (or assistant professor nearing tenure) in behavioral neuroscience to 
begin September 1, 2019. We are seeking to hire a scholar with a solid 
background in small animal fMRI and/or DTI at ultrahigh fields for linking 
systems neuroscience and brain MR imaging (the university has a 9.4T/30cm 
Bruker MRI for animal research). The exact discipline area is open for this 
position as scholarly excellence will be the primary consideration. Ideal 
candidates will have extensive experience in brain science-oriented MR 
research, demonstrate outstanding and innovative scholarship, and have 
collaborative and synergistic possibilities with existing researchers at UD. 
The candidate should enjoy collaborating with researchers from various 
disciplines (e.g., medical engineering, biochemistry) and helping researchers 
new to MRI.

This is an outstanding opportunity for a scholar to join and strengthen the 
growing Department of Psychological and Brain Sciences 
(https://www.psych.udel.edu <https://www.psych.udel.edu/>) and University of 
Delaware (https://www.udel.edu <https://www.udel.edu/>) that already has a 
promising core of interdisciplinary researchers utilizing cutting edge 
methodologies.

An innovative leader in research and teaching, the University of Delaware 
combines a rich historic legacy with a commitment to education and the latest 
in advanced technology. With external funding exceeding $200 million per year, 
the University ranks among the top 100 universities in federal R support for 
science and engineering. Enhanced by state-of-the-art facilities, research is 
conducted across all seven colleges and numerous interdisciplinary institutes 
and centers. Relevant facilities on campus include the new 11,600 square foot 
Center for Biomedical and Brain Imaging, housing the 9.4T/30cm Bruker MRI, a 3T 
Siemens Magnetom Prisma, and transcranial magnetic stimulation machine; a 
103,000 square foot Health Sciences Complex, a facility that includes labs for 
small animal and human-based studies, and an active outpatient clinic; a 
194,000 square foot Interdisciplinary Science and Engineering Laboratory; and 
the Delaware Technology Park, where entrepreneurial and academic research labs 
are co-located. The Delaware Health Sciences Alliance (DHSA), a partnership 
among the University of Delaware, Christiana Care Health System 
<http://www.christianacare.org/>, Nemours/Alfred I. du Pont Hospital for 
Children <http://www.nemours.org/welcome.html>, and Thomas Jefferson University 
<http://www.tju.edu/>, provides infrastructure and opportunity for innovative 
clinical and translational collaborations.

The University of Delaware is located in Newark, Delaware, which is only a 
short drive or train commute from Philadelphia, PA. UD is also within driving 
distance of New York City, Baltimore, Washington DC, the Poconos and some of 
the finest beaches in the country, making it an ideal location for day or 
weekend trips.

QUALIFICATIONS

Applicants for this position must have earned a Ph.D., tenure (or be nearing 
tenure), have a history of high-level publications in behavioral neuroscience 
or related fields, and conduct fundable research. 

APPLICATION INSTRUCTIONS

Using the Interfolio system at UD, http://apply.interfolio.com/58701 
<http://apply.interfolio.com/58701>, applicants submit a cover letter, a 
statement of research, a current curriculum vitae, three representative 
publications, and three confidential letters of reference. Inquiries, but not 
application materials, should be emailed to Jeffrey Rosen, Chair of the small 
animal MRI Faculty Search committee, jro...@psych.udel.edu. Review of 
applications will begin on January 15, 2019 and will continue until the 
position is filled.

The University of Delaware is an Equal Opportunity Employer which encourages 
applications from minority group members and women.  The University's Notice of 
Non-Discrimination can be found at 
http://www.udel.edu/aboutus/legalnotices.html.

-
Keith Schneider
Director, Center for Biomedical and Brain Imaging
Associate Professor
Department of Psychological and Brain Sciences
University of Delaware

___
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

[Freesurfer] MRI analyst position

[Keith Schneider]

YORK UNIVERSITY

Job Type: Contract
Location: Toronto, ON, CANADA;
Industry: Education
Company URL: http://www.yorku.ca
Date Posted:  March 31, 2011

JOB TITLE: MRI Analyst, Neuroimaging Laboratory

TYPE OF POSITION: Contract – 1 year contract with a possibility of renewal

SALARY: $60,000 - $75,000 per annum plus benefits

HOURS:  35 hours per week, with flexible work times

CLOSING DATE FOR POSITION:  April 14, 2011

JOB PURPOSE:
Reporting to the Director of the Neuroimaging Laboratory, the MRI Analyst will 
serve as the primary support person for the computational and analytical needs 
of the Neuroimaging Laboratory.

The Neuroimaging Laboratory at York University with a research-dedicated 
Siemens Trio MRI scanner is part of York’s world-class Centre for Vision 
Research.  Located at the Sherman Health Science Research Centre, the MRI 
Analyst is a key component of this new unit.

FUNCTIONS/DUTIES:
1. Consult with users of the Neuroimaging Laboratory to help them design 
and program experimental paradigms and assist in analyzing their MRI data
2. Develop new data analysis tools and write scripts to efficiently 
implement existing tools
3. Manage the MRI data server
4. Manage the Analysis Lab computer network
5. Assist with programming for the Neuroimaging Laboratory website
6. Provide IT support
7. Assist users of the Neuroimaging Laboratory with the design and 
fabrication of new stimulus equipment

EDUCATIONAL REQUIREMENTS: 
University undergraduate degree in science or engineering required, Master's 
degree preferred.

EXPERIENCE REQUIREMENTS: 
Experience with the analysis of MRI data desirable.   Experience with parallel 
processing on CPU clusters and/or GPUs is desirable.   Experience with system 
administration and network management is desirable.

SKILLS (Specialized knowledge):
Superior interpersonal skills and the ability to deal courteously and 
effectively with a wide range of people; excellent oral and written 
communication skills; demonstrated ability in exercising good judgment and 
initiative; excellent troubleshooting and problem-solving skills; ability to 
prioritize and work with deadlines; good organizational skills; ability to 
administer Mac and Linux computers; ability to utilize neuroimaging programs 
and statistical packages; computer programming (C, Matlab, shell scripts and/or 
other languages); ability to assess computer/network security, identify 
security risks and implement appropriate solutions.

Application Process Details

Your complete application package must include a cover letter, résumé, and the 
names of at least two   referees.

By submitting an application package, you agree that your referees may be 
contacted prior to any interview offer to gauge your suitability for the 
position.
 
Please ensure that “MRI Analyst” is quoted in e-mail subject lines and all hard 
copy applications.

Only those selected for an interview will be contacted. Priority consideration 
is given to Canadian citizens and permanent residents in Canada. York 
University is committed to Employment Equity and encourages applications from 
all qualified candidates.

Applications should be submitted to:

MRI Analyst Hiring Committee
The Office of the Vice-President, Research  Innovation
Fifth Floor, York Research Tower
York University
4700 Keele Street
Toronto, Ontario, Canada, M3J 1P3
Fax — 416-650-8197
Email — rsrch...@yorku.ca
___
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer


The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.

[Freesurfer] MRI Analyst job ad

[Keith Schneider]

Job Type: Contract
Location: Toronto, ON, CANADA;
Industry: Education
Company URL: http://www.yorku.ca
Date Posted:  January 27, 2011

JOB TITLE: MRI Analyst, Centre for Vision Research
TYPE OF POSITION: Contract – 1 year contract with a possibility of renewal
SALARY: $60,000 - $75,000 per annum plus benefits
HOURS:  35 hours per week – flexible work times
CLOSING DATE FOR POSITION:  February 3, 2011

JOB PURPOSE:

Reporting to the Director of the Neuroimaging Laboratory, the MRI Analyst will 
serve as the primary support person for the computational and analytical needs 
of the Neuroimaging Laboratory.

The Neuroimaging Laboratory at York University with a research-dedicated 
Siemens Trio MRI scanner is part of York’s world-class Centre for Vision 
Research.  Located at the Sherman Health Science Research Centre, the MRI 
Analyst is a key component of this new unit.

FUNCTIONS/DUTIES:

1. Consult with users of the Neuroimaging Laboratory to help them design 
and program experimental paradigms and assist in analyzing their MRI data
2. Develop new data analysis tools and write scripts to efficiently 
implement existing tools
3. Manage the MRI data server
4. Manage the Analysis Lab computer network
5. Assist with programming for the Neuroimaging Laboratory website
6. Provide IT support
7. Assist users of the Neuroimaging Laboratory with the design and 
fabrication of new stimulus equipment

EDUCATIONAL REQUIREMENTS: 
University undergraduate degree in science or engineering required, Master's 
degree preferred.

EXPERIENCE REQUIREMENTS: 
Experience with the analysis of MRI data desirable.   Experience with parallel 
processing on CPU clusters and/or GPUs is desirable.   Experience with system 
administration and network management is desirable.

SKILLS (Specialized knowledge):
Superior interpersonal skills and the ability to deal courteously and 
effectively with a wide range of people; excellent oral and written 
communication skills; demonstrated ability in exercising good judgment and 
initiative; excellent troubleshooting and problem-solving skills; ability to 
prioritize and work with deadlines; good organizational skills; ability to 
administer Mac and Linux computers; ability to utilize neuroimaging programs 
and statistical packages; computer programming (C, Matlab, shell scripts and/or 
other languages); ability to assess computer/network security, identify 
security risks and implement appropriate solutions.

Application Process Details

Your complete application package must include a cover letter, résumé, and the 
names of at least two referees.

The closing date for applications — which must be submitted by mail, e-mail or 
fax ONLY — is Wednesday, February 3, 2011.

Please ensure that “MRI Analyst” is quoted in e-mail subject lines and all hard 
copy applications.

Only those selected for an interview will be contacted. Priority consideration 
is given to Canadian citizens and permanent residents in Canada. York 
University is committed to Employment Equity and encourages applications from 
all qualified candidates.

Applications should be submitted to:

MRI Analyst Hiring Committee
The Office of the Vice-President, Research  Innovation
Fifth Floor, York Research Tower
York University
4700 Keele Street
Toronto, Ontario, Canada, M3J 1P3
Fax — 416-650-8197
Email — rsrch...@yorku.ca
___
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer


The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.

[Freesurfer] new fMRI discussion list

[Keith Schneider]

I've created a new mailing list for discussions among fMRI  
researchers that are not directly related to any particular software  
analysis package.  There are a variety of software packages  
available, and each of them has their own discussion list, but there  
is no list available for more general discussions, for example,  
questions about hardware, experimental designs, job advertisements,  
etc.  Currently many of these discussions take place on software- 
specific lists, where they are not strictly appropriate and people  
often post the same topics to multiple such lists to reach the widest  
audience, since until not a more appropriate forum did not exist.


To subscribe to this new fMRIList, visit the web site: https:// 
rcbi.rochester.edu/mailman/listinfo/fmrilist


keith

-
Keith Schneider
Assistant Professor
Rochester Center for Brain Imaging
University of Rochester
Rochester, NY

___
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

[Freesurfer] mri_convert: how to output one nii file per time point

[Keith Schneider]

Is it possible to have mri_convert output one nii (nifti) file per  
time point?  I'm giving it a list of Dicom files, and it outputs a  
single 4D file.  When I convert to spm, it gives me one analyze hdr  
and img pair per time point.


I'd like individual 3D files because I'm applying flirt to each  
volume to generate a transformation matrix for each time point.


Thanks for any info,

keith
___
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer