Re: [Freesurfer] Help!

2020-10-16 Thread Samar Fouda
External Email - Use Caution

Hi Anastasia,

Thank you so much for responding, please find the log attached!

On Fri, Oct 16, 2020 at 3:24 PM Yendiki, Anastasia 
wrote:

> Hi Samar - Can you please attach your trac-all.log file and your
> configuration file? It's hard to guess what's going on just from the line
> where the error occurs without seeing everything that came before it.
>
> Thanks!
> Anastasia.
> --
> *From:* freesurfer-boun...@nmr.mgh.harvard.edu <
> freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of Samar Fouda <
> samarsfo...@gmail.com>
> *Sent:* Friday, October 16, 2020 10:00 AM
> *To:* freesurfer@nmr.mgh.harvard.edu 
> *Subject:* [Freesurfer] Help!
>
>
> External Email - Use Caution
>
> Hi! I am trying to run tracula- TRAC-All and I get this error message, i
> assumed it is because that bvals and bvecs needed to be predetermined but
> it seems like that is not the case and i am still getting the same error:
>
> Transform file should be eddy_correct/eddy log file or .mat file
>
> What do you think the problem is?
>
> Thanks so much for your help.
> --
>
> *--*
>
> *Samar Fouda*
>
> *Post Doctoral Associate*
>
> *Emerge Research Program*
>
> *National Center for PTSD, Clinical Neuroscience Division*
>
> *Yale School of Medicine*
>
> *samar.fo...@yale.edu *
>
> *+1203285-7568*
> _______
> Freesurfer mailing list
> Freesurfer@nmr.mgh.harvard.edu
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer



-- 

*--*

*Samar Fouda*

*Post Doctoral Associate*

*Emerge Research Program*

*National Center for PTSD, Clinical Neuroscience Division*

*Yale School of Medicine*

*samar.fo...@yale.edu *

*+1203285-7568*


trac-all.log
Description: Binary data
___
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

[Freesurfer] Help!

2020-10-16 Thread Samar Fouda
External Email - Use Caution

Hi! I am trying to run tracula- TRAC-All and I get this error message, i
assumed it is because that bvals and bvecs needed to be predetermined but
it seems like that is not the case and i am still getting the same error:

Transform file should be eddy_correct/eddy log file or .mat file

What do you think the problem is?

Thanks so much for your help.
-- 

*--*

*Samar Fouda*

*Post Doctoral Associate*

*Emerge Research Program*

*National Center for PTSD, Clinical Neuroscience Division*

*Yale School of Medicine*

*samar.fo...@yale.edu *

*+1203285-7568*
___
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer