[Freesurfer] Postdoc: Brain networks, development, and mental illness risk
External Email - Use Caution Drs. Emma Towlson and Signe Bray at the University of Calgary are seeking applications for a postdoctoral scholar who will use c*omputational modeling of brain network alterations to study relationships to mental illness risk*. The project will involve working with neuroimaging data to build whole-brain simulations and examine network characteristics. Depending on interest, the postdoc may play a role in study design, data collection and processing, though the focus is modeling and data analysis. This is a 2-year position with the possibility of extension. Applicants should have interest in computational approaches to brain and mental health and have a background in network neuroscience, psychology, neurosciences, physics, biomedical engineering, or a related discipline. Experience with neuroimaging and strong data analytic skills are required. Calgary is a city of ~1.3M located a short-drive from Canada’s Rocky Mountains, offering outstanding outdoor recreation opportunities and more days of sunshine per year than any other major Canadian city. The postdoc will integrate with more than 300 Brain and Mental Health researchers at UCalgary and benefit from a new Computational Neuroscience Platform ( https://secure-web.cisco.com/17Kog-EAduJ6JkIBsDLKbEmlZaM8f3jyTiFiopeWtCLjVZqtUsF6Kltf33-qXBEckhfqBu0kyQcyDu6N0NIbSAz_W-ZahzO5qK_qNorJl0GOGr48DJbgajGSjQga85d0S3FK6OiJ7anTBYYHy5pNUaQTq5oAucqRh1uTLD4p1LOobETOlOTnKbXPqlXBs3j1sRcUzBxG-EyDy_vdLIwwUgjjhcdTqQC7cjqeclu5LS7l0IHbG8CZFbioohzzbkhTqLYF-aDHuLKz5FZ2Rdy92bZgTvYG3fiAzYNbS2nKrF5rEkQtACUpTOVe-UizB3JEpXFpvR1PLS6CtSfGGnxTt4Q/https%3A%2F%2Fhbi.ucalgary.ca%2Fresearch%2FComputationalNeuroscience). Interested candidates can find more details here https://secure-web.cisco.com/1UNSbOBLYUqexjCjYi1cQrH3hT9oGInSvtQKwe-O89g9FpmdL9Ar6jti7xydmQge0IvdyPfmEccJ0CtYFw3cuxgO9JzgXzWPiYb7zBwssAc9mnJs_ATeLRlQGiFo8xewygevXiRl7oK_d1xyWm-yVjOCy9k9jOn8T7aCvBuiGoVDIJ80AAiyUti48eARMAwIawS3RAlgvz9bgBTzW14nP-y-yY7-Ml28K_NyTctjMs_CXNaDfOtHz6yTJPCNYAwrYsY2lac9ZgSe9IQqpjCjlhKjwAg5NRiv02e85gSGvg7EVxLwqT0SaKMjBpoUfcN9qY6NCbACAHSrLRAMaYGBreg/https%3A%2F%2Fcareers.ucalgary.ca%2Fjobs%2F10428342-post-doctoral-scholar-department-of-radiology-cumming-school-of-medicine-and-the-departments-of-computer-science-and-of-physics-and-astronomy-faculty-of-science and submit a letter of interest and CV to slb...@ucalgary.ca and emma.towl...@ucalgary.ca or reach out with any questions. ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Mass General Brigham Compliance HelpLine at https://www.massgeneralbrigham.org/complianceline <https://www.massgeneralbrigham.org/complianceline> . Please note that this e-mail is not secure (encrypted). If you do not wish to continue communication over unencrypted e-mail, please notify the sender of this message immediately. Continuing to send or respond to e-mail after receiving this message means you understand and accept this risk and wish to continue to communicate over unencrypted e-mail.
[Freesurfer] Developmental neuroimaging postdoc positions
External Email - Use Caution The Department of Radiology in the Cumming School of Medicine at the University of Calgary is accepting applications for two Postdoctoral Scholar positions in Developmental neuroimaging and Computational modeling of mental illness risk. Both are 2-year positions with the possibility of extension. Postdocs will work with Drs. Signe Bray and Emma Towlson on projects related to precisely measuring brain development, characterizing brain alterations related to risk for neurodevelopmental and mental health conditions, e.g., related to perinatal complications, and early detection to support early intervention. Depending on interest, the postdocs may play a role in study design and data collection, data processing, analysis, methods development and computational modeling. Applicants must be nearing completion of a PhD or have completed a PhD in the last three years and should have a background in neuroimaging, psychology, neurosciences, physics, biomedical engineering, network neuroscience or a related discipline. It is highly desirable that applicants have experience conducting research in an interdisciplinary environment. Our labs and the University of Calgary are committed to equity, diversity and inclusion (EDI; https://secure-web.cisco.com/1Czb8F65qNPPaPzpvfwMNPke7cVunR3I0AKy6N8bdnMfNJen9xSuSzG6z7_nbgaMkn6Gir9jqD1YWq97JekUYto3dywJjVBejLQM_tSVa7b-6vEVU1N_MvfmhTTyfg1gf5rkFKMUkcLNGgvPKBU4gcugSKWEn2Bqc1y20RJoXp-aZztc293f9jwP-gAdn1zUB3RhXNH0tvxPNx4SwtgHGRUnj0WX9Ygdz4WQPqndTi_c1ERD0FviXzQJuTvvkKCVvudnGtjvkvEz_oenAzpPj05IAaJX5otj1Ioimucv3Cn7sqpajHuiWFMF9ePM8tzrvhZGeg_ktn7atu9807ReQTg/https%3A%2F%2Fwww.ucalgary.ca%2Fequity-diversity-inclusion) and we encourage applicants from diverse backgrounds to apply. Interested candidates should submit a letter of interest and CV to slb...@ucalgary.ca. The University of Calgary is Canada’s leading next-generation university – a living, growing and youthful institution that embraces change and opportunity with a can-do attitude. Located in the nation’s most enterprising city, the university is making tremendous progress on its Eyes High journey to be recognized as one of Canada’s top five research universities, grounded in innovative learning and teaching and fully integrated with the community it both serves and leads. The University of Calgary inspires and supports discovery, creativity and innovation across all disciplines, and champions transdisciplinary approaches. For more information, visit *ucalgary.ca* <http://secure-web.cisco.com/138dcsY7eZIt2nQy0vWSYF3ZuKQU6w1BACuk2noojTvHwfcaIIp9HfljDArZW9UEvvERJX9t6hc6ZslLqG0mSWkv-cGI7ajbfK9osJAxeDqLnMlqTE6-2OZxComg83-SVYyqGvSkmSJHpPWpI5F1r4G6OpjzxoOJ_-kiyAGI7vX3ZwOptEjb1CnmzIXMdTZS0l7LclDPDG3-pX55VsLNembhhYOHaCD-4gyECk54a4gyJLnERbXsGRfqoxmfEyzCHpkRLUsuYe7Cti-1k9wF75DWSd9zOkqQRGwo_Z59MsQDakmTh3GkW2S3nNg-qM9KFjsOdUGq1I5b7H-4GKTjOcQ/http%3A%2F%2Fwww.ucalgary.ca%2F>. Calgary is one of the world's cleanest cities and has been named one of the world's most livable cities for years. Calgary is a city of leaders – in business, community, philanthropy and volunteerism. Calgarians benefit from the strongest economy in the nation and enjoy more days of sunshine per year than any other major Canadian city. Calgary is less than an hour’s drive from the Rocky Mountains and boasts the most extensive urban pathway and bikeway network in North America. ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Mass General Brigham Compliance HelpLine at https://www.massgeneralbrigham.org/complianceline <https://www.massgeneralbrigham.org/complianceline> . Please note that this e-mail is not secure (encrypted). If you do not wish to continue communication over unencrypted e-mail, please notify the sender of this message immediately. Continuing to send or respond to e-mail after receiving this message means you understand and accept this risk and wish to continue to communicate over unencrypted e-mail.
[Freesurfer] Postdoc in developmental neuroimaging
External Email - Use Caution The Department of Radiology and the Child and Adolescent Imaging Research (CAIR) Program at the University of Calgary are seeking applications for a post-doctoral scholar in developmental neuroimaging. The postdoc will work with the Bray Neuroimaging Lab led by Dr. Signe Bray (@braynimaginglab, http://brayneuroimaginglab.ca) on studies of healthy brain development and neurodevelopmental conditions such as autism and preterm birth. Applicants should have a background in psychology, neurosciences, biomedical engineering or a relevant discipline. Experience with neuroimaging and/or pediatric research and strong data analytic skills is required as well as interest in computational modeling and novel approaches to neuroimaging analyses. This is a 2-year position with the possibility of extension. Applicants should submit a letter of interest and CV to slb...@ucalgary.ca. On-site meetings at OHBM can be scheduled. The CAIR Program is a pediatric dedicated imaging program based at the Alberta Children’s Hospital that manages a research-dedicated 3T MR scanner, MRI-compatible EEG system, eye tracking and MRI simulator for preparing children. Calgary is less than an hour’s drive from the majestic Rocky Mountains and offers outstanding opportunities for outdoor recreation including world class skiing, hiking and climbing. The city has been named a cultural capital of Canada and one of the best places to live in the world, Calgary is a city of leaders – in business, community, philanthropy and volunteerism boasts the most extensive urban pathway and bikeway network in North America. ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
[Freesurfer] tksurfer error
Hi, I have been experiencing an error with tksurfer. It occurs when I am trying to generate an occipital patch, following these instructions: http://surfer.nmr.mgh.harvard.edu/fswiki/FreeSurferOccipitalFlattenedPatch I open a surface using: tksurfer SUBJ lh inflated -curv lh.curv Following the steps, when I click the surface and press the Fill Uncut Area button, tksurfer crashes with the following error: tksurfer.bin: tnl/t_vertex.c:407: update_input_ptrs: Assertion `a[j].inputstride == vptr-stride' failed. I have also experienced this problem zooming out on a specific surface patch. I have seen this problem in different forms on the mailing list, but have not seen any solutions or workarounds: http://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg19846.html http://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg14612.htmlhttp://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg16303.html My machine info: - FREESURFER_HOME: /usr/local/freesurfer Build stamp: freesurfer-Linux-centos4_x86_64-stable-pub-v5.1.0 Debian version: squeeze/sid Kernel info: Linux 2.6.38-8-generic x86_64 - Thank you, Signe ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
