[Freesurfer] Hippocampus Subregion

2019-09-26 Thread ZZY
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Dear Freesurfer experts,


               I got the volume of 
hippocampal subregions by using the command -  "recon-all -all -s bert 
-hippocampal-subfields-T1" in Freesurfer. How do I get the surface-level 
metrics of the hippocampal subregions (e.g., area, thicknness and curve) in the 
T1 mage?


Best,
Zhiyong___
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[Freesurfer] ?????? Hippocampal Subfields Atlas

2019-09-25 Thread ZZY
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Dear  Doug??
         I know the fsfast but have never used it 
before, and I just preprocessed my resting-state fMRI data by using SPM 
toolbox. Next, we want to analyze the functional connecitvity between 
the hippocampal subregions. 


Best,


Zhiyong


--  --
??: "Greve, Douglas N.,Ph.D."https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer


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[Freesurfer] Hippocampal Subfields Atlas

2019-09-25 Thread ZZY
External Email - Use Caution

Dear  Doug??

     I have a group of multimode MRI data, including functional 
MRI, T1WI and diffusion MRI. We want to analyze the functional and structual 
connectivity between the hippocampal subregions.  Now, we have obtained 
individual-level atlas of hippocampal subfields for each subject by using 
FREESURFER 6.0 on the T1 image. What should we do next step? How do get a 
group-level atlas of hippocampal subfields and apply it to functuional and 
diffusion data?




 


Best,


Zhiyong___
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Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

[Freesurfer] Hippocampal Subfields Atlas

2019-09-22 Thread ZZY
External Email - Use Caution

Dear Freesurfer developer:
              I have a group of multimode 
MRI data, including functional MRI, T1WI and diffusion MRI. We want to analyze 
the functional and structual connectivity between the hippocampal subregions.
Now, we have obtained individual-level atlas of hippocampal subfields for each 
subject by using FREESURFER 6.0 on the T1 image. What should we do next step? 
How do get a group-level atlas of hippocampal subfields and apply it to 
functuional and diffusion data?


Best,
zhiyong___
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer