[Freesurfer] ?h.aparc.stats file question

2011-04-14 Thread Tetiana Dadakova
Dear list,

I was trying to find the values of volumes for different cortical
regions. What I found is the 4th column (called GrayVol) in
?h.aparc.stats file.
Although, the values don't really seem to be what I look for, as
values are too small (e.g. 0.5 mm^3 for cuneus).

Could you please guide me where I should look for these values, or
probably how should I interpret the values in ?h.aparc.stats file.

Thank you,
Tanja.
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Re: [Freesurfer] ?h.aparc.stats file question

2011-04-14 Thread Douglas N Greve
Hi Tanja, the GrayVol is the number that you should be looking at. Are 
you sure you're looking at the right column? It should be the 4th col 
(including the structure name). Eg:

cuneus   1722   1127   2145  1.835 
0.411 0.160 0.072   45 5.1

this one has:
NumVert 1722 
SurfArea 1127 
GrayVol 2145
ThickAvg 1.835

doug





Tetiana Dadakova wrote:
 Dear list,

 I was trying to find the values of volumes for different cortical
 regions. What I found is the 4th column (called GrayVol) in
 ?h.aparc.stats file.
 Although, the values don't really seem to be what I look for, as
 values are too small (e.g. 0.5 mm^3 for cuneus).

 Could you please guide me where I should look for these values, or
 probably how should I interpret the values in ?h.aparc.stats file.

 Thank you,
 Tanja.
 ___
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 Freesurfer@nmr.mgh.harvard.edu
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-- 
Douglas N. Greve, Ph.D.
MGH-NMR Center
gr...@nmr.mgh.harvard.edu
Phone Number: 617-724-2358 
Fax: 617-726-7422

Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html

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The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
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Re: [Freesurfer] ?h.aparc.stats file question

2011-04-14 Thread Tetiana Dadakova
Thank you Doug,

I was looking at the wrong column.

Best wishes,
Tanja.

On Thu, Apr 14, 2011 at 5:18 PM, Douglas N Greve
gr...@nmr.mgh.harvard.edu wrote:
 Hi Tanja, the GrayVol is the number that you should be looking at. Are you
 sure you're looking at the right column? It should be the 4th col (including
 the structure name). Eg:

 cuneus                                   1722   1127   2145  1.835 0.411
 0.160     0.072       45     5.1

 this one has:
 NumVert 1722 SurfArea 1127 GrayVol 2145
 ThickAvg 1.835

 doug





 Tetiana Dadakova wrote:

 Dear list,

 I was trying to find the values of volumes for different cortical
 regions. What I found is the 4th column (called GrayVol) in
 ?h.aparc.stats file.
 Although, the values don't really seem to be what I look for, as
 values are too small (e.g. 0.5 mm^3 for cuneus).

 Could you please guide me where I should look for these values, or
 probably how should I interpret the values in ?h.aparc.stats file.

 Thank you,
 Tanja.
 ___
 Freesurfer mailing list
 Freesurfer@nmr.mgh.harvard.edu
 https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer




 --
 Douglas N. Greve, Ph.D.
 MGH-NMR Center
 gr...@nmr.mgh.harvard.edu
 Phone Number: 617-724-2358 Fax: 617-726-7422

 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
 FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html



 The information in this e-mail is intended only for the person to whom it is
 addressed. If you believe this e-mail was sent to you in error and the
 e-mail
 contains patient information, please contact the Partners Compliance
 HelpLine at
 http://www.partners.org/complianceline . If the e-mail was sent to you in
 error
 but does not contain patient information, please contact the sender and
 properly
 dispose of the e-mail.



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