Re: [Freesurfer] Cluster Color
On what? Please include previous correspondence so that we have context. On 11/15/16 9:10 AM, Timothy Hendrickson wrote: It seems that this message has been ignored. I really do need an answer on this. -Tim Timothy Hendrickson Department of Psychiatry University of Minnesota Office: 612-624-6441 Mobile: 507-259-3434 (texts okay) ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Re: [Freesurfer] Cluster Color
It seems that this message has been ignored. I really do need an answer on this. -Tim Timothy Hendrickson Department of Psychiatry University of Minnesota Office: 612-624-6441 Mobile: 507-259-3434 (texts okay) ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Re: [Freesurfer] Cluster Color
I'm just following up on this e-mail. I have not heard anything yet. -Tim On Mon, May 9, 2016 at 3:16 PM, Timothy Hendrickson wrote: > Free Surfer Support, > > I have been using the command line version for group analysis since my > data set has too many factors for QDEC. > > There are a few things that I enjoy about QDEC that I wish I could > incorporate into the command line. > > 1) In QDEC the cluster color is not set arbitrarily, but rather based on > significance. > > Is there any way to have the cluster color be set based on significance at > command line? > > Is there a way to restrict the available colors that the clusters can be > set as? > Occasionally, cluster colors are a very similar color to the inflated > underlay making it difficult to determine the outline of said cluster. > > 2) In QDEC one is able to visualize a scatter plot for a particular > cluster. Is there any way to do this via the command line option? > > Thank you, > > -Tim Hendrickson > > -- > Timothy Hendrickson > Department of Psychiatry > University of Minnesota > Mobile: 507-259-3434 (texts okay) > -- Timothy Hendrickson Department of Psychiatry University of Minnesota Mobile: 507-259-3434 (texts okay) ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
[Freesurfer] Cluster Color
Free Surfer Support, I have been using the command line version for group analysis since my data set has too many factors for QDEC. There are a few things that I enjoy about QDEC that I wish I could incorporate into the command line. 1) In QDEC the cluster color is not set arbitrarily, but rather based on significance. Is there any way to have the cluster color be set based on significance at command line? Is there a way to restrict the available colors that the clusters can be set as? Occasionally, cluster colors are a very similar color to the inflated underlay making it difficult to determine the outline of said cluster. 2) In QDEC one is able to visualize a scatter plot for a particular cluster. Is there any way to do this via the command line option? Thank you, -Tim Hendrickson -- Timothy Hendrickson Department of Psychiatry University of Minnesota Mobile: 507-259-3434 (texts okay) ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
