Re: [Freesurfer] Creation of the aseg.stats table fails when only running -autorecon1 or -autorecon2
Look here ftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/5.3.0-patch/ and get the appropriate mri_segstats for your system. Copy it to $FREESURFER_HOME/bin, rehash, and rerun doug On 02/06/2015 08:07 AM, Roberto Medeiros de Souza wrote: Hi, I'm knew to FreeSurfer. I am using the stable v5.3 and I am having the known issue about Creation of the aseg.stats table fails when only running -autorecon1 or -autorecon2 because ribbon.mgz is not present. The FreeSurfer page (https://surfer.nmr.mgh.harvard.edu/fswiki/ReleaseNotes) says that this problem has been solved and that I should ask for a patch. Does anyone knows where I can get this patch? Thanks in advance! Roberto Medeiros de Souza ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
[Freesurfer] Creation of the aseg.stats table fails when only running -autorecon1 or -autorecon2
Hi, I'm knew to FreeSurfer. I am using the stable v5.3 and I am having the known issue about Creation of the aseg.stats table fails when only running -autorecon1 or -autorecon2 because ribbon.mgz is not present. The FreeSurfer page ( https://surfer.nmr.mgh.harvard.edu/fswiki/ReleaseNotes) says that this problem has been solved and that I should ask for a patch. Does anyone knows where I can get this patch? Thanks in advance! Roberto Medeiros de Souza ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Re: [Freesurfer] Creation of the aseg.stats table fails when only running -autorecon1 or -autorecon2
Hi Roberto, I had the same problem, you need to re run the recon process using recon-all -s subjid -cortribbon. Hope it helps Pradeep. On Fri, Feb 6, 2015 at 6:37 PM, Roberto Medeiros de Souza roberto.medeiros.so...@gmail.com wrote: Hi, I'm knew to FreeSurfer. I am using the stable v5.3 and I am having the known issue about Creation of the aseg.stats table fails when only running -autorecon1 or -autorecon2 because ribbon.mgz is not present. The FreeSurfer page ( https://surfer.nmr.mgh.harvard.edu/fswiki/ReleaseNotes) says that this problem has been solved and that I should ask for a patch. Does anyone knows where I can get this patch? Thanks in advance! Roberto Medeiros de Souza ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. -- Pradeep Kumar Mahato ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
