[Freesurfer] Fwd: Error in longitudinal pipeline {Disarmed}

2020-11-20 Thread vittal korann
External Email - Use Caution

Hi FreeSurfer experts

Recently I started working on the longitudinal data.
I followed the pipeline described in the below link.
Also, I attached my longitudinal table along with freesurfer data.

https://secure-web.cisco.com/10GeKQWbNwmdQQgtn3lkt2V_V6CbZVv7dzOuHKANAfbzRAGomTtlFNhDzA4pY4ZQuLB5OKutRoWZmuTIiRZq8s8dHrF_8jP9_YwiAcYhWc2_nJ1F7j6KtRcLuBUeRd8AEwLty9yAMeJlyYLagWgXBRfs9aYywbcF4h7qbXbfe1Fp6tkTjAhKB7KqEvstqt7f-PV9c2yCvmZdmgnQTe8ZOr5036aKU2v0XgzyYpMep8-97LMopdyYsudhNkLZFuWdv82PEMhJPNLAupP3KrdD04Q/https%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Ffswiki%2FLinearMixedEffectsModels

I got the error while executing the following commands:

CM.C = [zeros(3,5) [1 0 0 0 0 0 0;-1 0 0 1 0 0 0;0 0 0 -1 0 0 1] zeros(3,5)];

F_lhstats = lme_mass_F(lhstats,CM);

And the Matlab threw an error shown below

>> CM.C = [zeros(3,5) [1 0 0 0 0 0 0;-1 0 0 1 0 0 0;0 0 0 -1 0 0 1]
> zeros(3,5)];
> >> F_lhstats = lme_mass_F(lhstats,CM);
> Error using lme_mass_F (line 50)
> The number of colums in the contrast matrix CM(1).C is different from the
> corresponding number of fixed effects in stats(1).Bhat


Any help would be appreciated!

With regards
Korann


long.qdec.table.dat.xlsx
Description: MS-Excel 2007 spreadsheet
___
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

[Freesurfer] Fwd: Error in longitudinal pipeline {Disarmed}

2020-11-21 Thread vittal korann
External Email - Use Caution

-- Forwarded message -
From: vittal korann 
Date: Tue, Nov 17, 2020 at 1:16 PM
Subject: Error in longitudinal pipeline
To: 


Hi FreeSurfer experts

Recently I started working on the longitudinal data.
I followed the pipeline described in the below link.
Also, I attached my longitudinal table along with freesurfer data.

https://secure-web.cisco.com/1tkYny6yViIok4HHSJ4fdMQL186SjX1A72s5pbjDlpttjtAFE-0v8RFBy_Lk2cKKs4MGT9RFKv5HsAu_7F8jM2TtWaxqsyoMQW-CTzq3bhcMd-7Wo2S3eNWwTudolPJ-_WhLmM5DVNO_0ULMkb1h-pHwkm8fwNvCyLDEyh7IHl2De94ETqs1YrtsWn7VrIdDRrcbsCTnG4tUkpn5RdBwzkgouQ6YY06qwKUlG7AaN5jsrJRE5-yYMXoqWijHvYICv-yhXkkpuox_SkoU4u-4lcA/https%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Ffswiki%2FLinearMixedEffectsModels

I got the error while executing the following commands:

CM.C = [zeros(3,5) [1 0 0 0 0 0 0;-1 0 0 1 0 0 0;0 0 0 -1 0 0 1] zeros(3,5)];

F_lhstats = lme_mass_F(lhstats,CM);

And the Matlab threw an error shown below

>> CM.C = [zeros(3,5) [1 0 0 0 0 0 0;-1 0 0 1 0 0 0;0 0 0 -1 0 0 1]
> zeros(3,5)];
> >> F_lhstats = lme_mass_F(lhstats,CM);
> Error using lme_mass_F (line 50)
> The number of colums in the contrast matrix CM(1).C is different from the
> corresponding number of fixed effects in stats(1).Bhat


Any help would be appreciated!

With regards
Korann


long.qdec.table.dat.xlsx
Description: MS-Excel 2007 spreadsheet
___
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer