Hello Erin,
Thank you so much for asking. I have been curious to know this, too.
Sincerely,
Ye
On Wed, Jul 17, 2013 at 12:41 PM, Erin Browning wrote:
> Hello--
>
> We have a set of scans with bad artifact throughout the temporal lobe and
> the superior cortex. We've had to do the normalization steps (n3
> correction, normalization) manually on most of these scans to preserve the
> gm/wm boundary. Now, when we run mri_segment, it leaves out some gray
> matter along the pial border. Is there a correction for this? Mri_segment
> has wlo and whi and ghi, but no glo, and it doesn't look like there's a
> method to add gray matter to the pial boundary like there is to remove it.
>
> Thank you,
> Erin Browning
>
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