Re: [Freesurfer] Inflated surface smooth but white matter surface has holes
Dear Bruce, Thank you very much! It works like a charm! Sincerely, Ye On Fri, Jul 12, 2013 at 3:53 PM, Bruce Fischl fis...@nmr.mgh.harvard.eduwrote: Hi Ye almost certainly not. Try running mris_euler_number - it will tell you the topology of the surface (which is the same for inflated/white/pial/...) cheers Bruce On Fri, 12 Jul 2013, ye tian wrote: Dear Freesurfers, My inflated surface looks smooth in tksurfer, but white matter surface has holes in it. Is this an indication of topological defects? Thank you very much! Sincerely, Ye The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/**compliancelinehttp://www.partners.org/complianceline. If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
[Freesurfer] Inflated surface smooth but white matter surface has holes
Dear Freesurfers, My inflated surface looks smooth in tksurfer, but white matter surface has holes in it. Is this an indication of topological defects? Thank you very much! Sincerely, Ye ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Re: [Freesurfer] Inflated surface smooth but white matter surface has holes
Hi Ye almost certainly not. Try running mris_euler_number - it will tell you the topology of the surface (which is the same for inflated/white/pial/...) cheers Bruce On Fri, 12 Jul 2013, ye tian wrote: Dear Freesurfers, My inflated surface looks smooth in tksurfer, but white matter surface has holes in it. Is this an indication of topological defects? Thank you very much! Sincerely, Ye ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
