[Freesurfer] Installatin question

2006-09-26 Thread XJ Kang




Hi, 

I am using Readhat Enterprise WS 3 on an AMD 64-bit machine. Here is
my info:
%cat /etc/redhat-release
Red Hat Enterprise Linux WS release 3 (Taroon Update 2)
%uname -m
x86_64

Therefore, I downloaded freesurfer-Linux-centos4_x86_64-stable-pub-v3.0.3-full.tar.gz.

When I tried to untar the file like:
%tar tzf freesurfer-Linux-centos4_x86_64-stable-pub-v3.0.3-full.tar.gz

I got the error message:

freesurfer/bin/mkxsubjreg
freesurfer/bin/mris_annot_to_segmentation
tar: Skipping to next header
tar: Archive contains obsolescent base-64 headers

gzip: stdin: invalid compressed data--crc error

gzip: stdin: invalid compressed data--length error
tar: Child returned status 1
tar: Error exit delayed from previous errors

The installation stopped. Anyone has the same kind of problem? 

I downloaded the file in Windows sysem and then ftp it to my linux
station. Does this matter? Or I need to download another file? 

Thank you in advance. 

XJ Kang



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Re: [Freesurfer] Installatin question

2006-09-26 Thread Nick Schmansky
After the file is downloaded, you can confirm its integrity by checking
against the md5sum number for the file shown in the table on the
download page at:

https://surfer.nmr.mgh.harvard.edu/fswiki/Download

I suspect the file was corrupted somewhere in the download/transfer.


On Tue, 2006-09-26 at 10:49 -0700, XJ Kang wrote:
 Hi, 
 
  I am using Readhat Enterprise WS 3 on an AMD 64-bit machine.  Here is
 my info:
 %cat /etc/redhat-release
 Red Hat Enterprise Linux WS release 3 (Taroon Update 2)
 %uname -m
 x86_64
 
 Therefore, I downloaded freesurfer-Linux-centos4_x86_64-stable-pub-
 v3.0.3-full.tar.gz.
 
 When I tried to untar the file like:
 %tar tzf freesurfer-Linux-centos4_x86_64-stable-pub-v3.0.3-full.tar.gz
 
  I got the error message:
 
 freesurfer/bin/mkxsubjreg
 freesurfer/bin/mris_annot_to_segmentation
 tar: Skipping to next header
 tar: Archive contains obsolescent base-64 headers
 
 gzip: stdin: invalid compressed data--crc error
 
 gzip: stdin: invalid compressed data--length error
 tar: Child returned status 1
 tar: Error exit delayed from previous errors
 
 The installation stopped. Anyone has the same kind of problem?   
 
 I downloaded the file in Windows sysem and then ftp it to my linux
 station. Does this matter? Or I need to download another file? 
 
 Thank you in advance. 
 
 XJ Kang
 
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 Freesurfer mailing list
 Freesurfer@nmr.mgh.harvard.edu
 https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

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