You can add --mul 1000 to multiply everything by 1000
On 10/11/16 4:47 PM, Chung, Yoonho wrote:
Hi!
I ran mri_segstats as instructed in the wiki to extract ADC values
from adc.nii. And as you can see below in my output, I think the
decimal digits are truncated and missing the following decimal values.
Is there an option or other way to get around this problem and extract
ADC values from the ROIS with greater precision? Thank you!
mri_segstats \
--seg $SUBJECTS_DIR/$subj/mri/wmparc2diff.mgz \
--ctab $FREESURFER_HOME/FreeSurferColorLUT.txt \
--id 251 --id 3021 --id 3024 --id 3030 --id 12 --id 4 \
--i adc.nii --sum adc.stat
# ColHeaders Index SegId NVoxels Volume_mm3 StructName Mean StdDev
Min Max Range
29 3001 344 2752.0 wm-lh-bankssts
0.0007 0.0001 0.0006 0.0009 0.0003
30 3002 450 3600.0 wm-lh-caudalanteriorcingulate
0.0009 0.0003 0.0006 0.0026 0.0020
31 3003 851 6808.0 wm-lh-caudalmiddlefrontal
0.0007 0.0001 0.0005 0.0010 0.0005
32 3005 337 2696.0 wm-lh-cuneus
0.0008 0.0001 0.0006 0.0011 0.0005
33 300682 656.0 wm-lh-entorhinal
0.0009 0.0001 0.0008 0.0016 0.0008
___
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
___
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.
