The cluster summary file should indicate which vertex is the maximum.
You can then go into matlab and run
y = MRIread('y.mgh');
v = squeeze(y.vol(vertexno+1,1,1,:));
where y.mgh is the input to mri_glmfit (ie, the stack of all your
subjects) and vertexno is the vertex number from the cluster summary
file. v will be a list of number, one for each subbject
On 1/30/19 10:19 AM, Marina Fernández wrote:
>
> External Email - Use Caution
>
> Dear Freesurfer Team,
>
> How can I get the maximum vertex value for each subject in a
> particular cluster?
>
> Thank you very much.
>
> Marina.
>
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