Re: [Freesurfer] QDEC 5.0 with data from 4.x recon-all data
You can say 4.x. The statistical part did not change that much in version 5. doug Manabu Kubota wrote: Hi, I'm interested in this issue. If I use a former FreeSurfer version (ver. 4.x) for all the preprocessing of each data and apply the new QDEC in FreeSurfer ver. 5.0.0 JUST to make analyses easier (say, use of mri_glmfit-sim), do I have to specify both FreeSurfer ver. 4.x and FreeSurfer 5.0.0 (or QDEC ver 1.4) in the methodological section of research manuscripts? Or is it enough to mention FreeSurfer ver. 4.x (and mri_glmfit-sim) for the analyses? Best regards, Manabu Graduate school of medicine, Kyoto University 2010/10/1 Nick Schmansky ni...@nmr.mgh.harvard.edu: yes, you may use v5 qdec with prior processed data. n. On Thu, 2010-09-30 at 21:04 +0200, Christian Scheel wrote: Dear Mira, I posted a similar question some days ago. It seems to be possible to use the new qdec version for the group analysis for data that has been processed and cached with version 4.x (at least 4.05 and newer). Check this posting in the mailing archive: http://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg15166.html Best wishes, Christian --- Christian Scheel University of Cologne Department of Psychiatry Am 30.09.2010 20:45, schrieb Mira Michelle Raman: Hi, I was wondering if it were possible/advisable to use data processed and cached using earlier versions of FreeSurfe with the new 5.0 QDEC, since it has enhanced capabilities. Sincerely, Mira Mira Michelle Raman Scientific Programmer Center for Interdisciplinary Brain Sciences Research Stanford University ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Re: [Freesurfer] QDEC 5.0 with data from 4.x recon-all data
Hi, I'm interested in this issue. If I use a former FreeSurfer version (ver. 4.x) for all the preprocessing of each data and apply the new QDEC in FreeSurfer ver. 5.0.0 JUST to make analyses easier (say, use of mri_glmfit-sim), do I have to specify both FreeSurfer ver. 4.x and FreeSurfer 5.0.0 (or QDEC ver 1.4) in the methodological section of research manuscripts? Or is it enough to mention FreeSurfer ver. 4.x (and mri_glmfit-sim) for the analyses? Best regards, Manabu Graduate school of medicine, Kyoto University 2010/10/1 Nick Schmansky ni...@nmr.mgh.harvard.edu: yes, you may use v5 qdec with prior processed data. n. On Thu, 2010-09-30 at 21:04 +0200, Christian Scheel wrote: Dear Mira, I posted a similar question some days ago. It seems to be possible to use the new qdec version for the group analysis for data that has been processed and cached with version 4.x (at least 4.05 and newer). Check this posting in the mailing archive: http://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg15166.html Best wishes, Christian --- Christian Scheel University of Cologne Department of Psychiatry Am 30.09.2010 20:45, schrieb Mira Michelle Raman: Hi, I was wondering if it were possible/advisable to use data processed and cached using earlier versions of FreeSurfe with the new 5.0 QDEC, since it has enhanced capabilities. Sincerely, Mira Mira Michelle Raman Scientific Programmer Center for Interdisciplinary Brain Sciences Research Stanford University ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- 久保田 学 KUBOTA Manabu kubot...@kuhp.kyoto-u.ac.jp Department of Neuropsychiatry Graduate School of Medicine, Kyoto University ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
[Freesurfer] QDEC 5.0 with data from 4.x recon-all data
Hi, I was wondering if it were possible/advisable to use data processed and cached using earlier versions of FreeSurfe with the new 5.0 QDEC, since it has enhanced capabilities. Sincerely, Mira Mira Michelle Raman Scientific Programmer Center for Interdisciplinary Brain Sciences Research Stanford University ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Re: [Freesurfer] QDEC 5.0 with data from 4.x recon-all data
yes, you may use v5 qdec with prior processed data. n. On Thu, 2010-09-30 at 21:04 +0200, Christian Scheel wrote: Dear Mira, I posted a similar question some days ago. It seems to be possible to use the new qdec version for the group analysis for data that has been processed and cached with version 4.x (at least 4.05 and newer). Check this posting in the mailing archive: http://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg15166.html Best wishes, Christian --- Christian Scheel University of Cologne Department of Psychiatry Am 30.09.2010 20:45, schrieb Mira Michelle Raman: Hi, I was wondering if it were possible/advisable to use data processed and cached using earlier versions of FreeSurfe with the new 5.0 QDEC, since it has enhanced capabilities. Sincerely, Mira Mira Michelle Raman Scientific Programmer Center for Interdisciplinary Brain Sciences Research Stanford University ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
