[Freesurfer] Segmentation fault (core dumped) again in the BETA version

2013-05-07 Thread martina.andellini
Hi Freesurfer experts,
I've got Ubuntu version 13.04 installed on my computer, and after I saw the post
: http://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg28267.html; I d
ecide to install the BETA version freesurfer-Linux-centos6_x86_64-stable-pub-v5.
3.0-BETA.tar.gz as adviced.
I still run into the same error when I run mri_nu_correct.mni and tkmedit:

Segmentation fault (core dumped) 
ERROR: converting to minc

and

===
ERROR: A segfault has occurred. This is not your fault,
  : but is most likely an unrecoverable error and has
  : made the program unstable.
  :
  : Please send the contents of the file .xdebug_tkmedit
  : that should be in this directory to freesurfer@nmr.mgh.harvard.edu
  :
  : Now exiting...
  :


Can anyone please advice on that?
thanks a lot
Martina

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Re: [Freesurfer] Segmentation fault (core dumped) again in the BETA version

2013-05-07 Thread Nick Schmansky
Martina,

Can you send me the recon-all.log file?

Nick


On Tue, 2013-05-07 at 17:38 +0200, martina.andell...@fastwebnet.it
wrote:
 Hi Freesurfer experts,
 I've got Ubuntu version 13.04 installed on my computer, and after I saw the 
 post
 : http://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg28267.html; 
 I d
 ecide to install the BETA version 
 freesurfer-Linux-centos6_x86_64-stable-pub-v5.
 3.0-BETA.tar.gz as adviced.
 I still run into the same error when I run mri_nu_correct.mni and tkmedit:
 
 Segmentation fault (core dumped) 
 ERROR: converting to minc
 
 and
 
 ===
 ERROR: A segfault has occurred. This is not your fault,
   : but is most likely an unrecoverable error and has
   : made the program unstable.
   :
   : Please send the contents of the file .xdebug_tkmedit
   : that should be in this directory to freesurfer@nmr.mgh.harvard.edu
   :
   : Now exiting...
   :
 
 
 Can anyone please advice on that?
 thanks a lot
 Martina
 
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 Freesurfer mailing list
 Freesurfer@nmr.mgh.harvard.edu
 https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
 
 


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https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer


The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.