Re: [Freesurfer] aseg annotation2label

2019-06-22 Thread Bruce Fischl

mri_vol2label should do the trick

cheers
Bruce
On Sat, 22 Jun 2019, Sam W. wrote:



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Hello,

I'm trying to create label files of the aparc+aseg ROIs but cannot find the 
aseg annotations. The
?h.aparc.annot does not contain subcortical regions that exist in the 
aparc+aseg.mgz volume. Is
there a way to apply mri_annotation2label to aseg labels?
Thanks!

Best regards,
Sam

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[Freesurfer] aseg annotation2label

2019-06-22 Thread Sam W.
External Email - Use Caution

 Hello,

I'm trying to create label files of the aparc+aseg ROIs but cannot find the
aseg annotations. The ?h.aparc.annot does not contain subcortical regions
that exist in the aparc+aseg.mgz volume. Is there a way to apply
mri_annotation2label to aseg labels?
Thanks!

Best regards,
Sam
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