[Freesurfer] converting thickess file to ascii
Can mris_convert be used to convert thickness files to ascii? My attempts so far have resulted in segfaults: [EMAIL PROTECTED] surf]$ mris_convert lh.thickness lh.thickness.asc Segmentation fault [EMAIL PROTECTED] surf]$ Or is there another way to convert thickness files to ascii? Thanks, -Adam --- Adam Thomas [EMAIL PROTECTED] Functional MRI Facility, NIMH/NIH/DHHS 10 Center Dr, Room B1D708A Bethesda MD. 20892-1148 ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Re: [Freesurfer] converting thickess file to ascii
Hi Adam, mris_convert still wants a surface file for reference. I've succeeded doing what you want by pretending it's a curvature file as in mris_convert -c lh.thickness lh.orig lh.thickness.asc Johannes Thomas, Adam (NIH/NIMH) schrieb: Can mris_convert be used to convert thickness files to ascii? My attempts so far have resulted in segfaults: [EMAIL PROTECTED] surf]$ mris_convert lh.thickness lh.thickness.asc Segmentation fault [EMAIL PROTECTED] surf]$ Or is there another way to convert thickness files to ascii? Thanks, -Adam --- Adam Thomas [EMAIL PROTECTED] Functional MRI Facility, NIMH/NIH/DHHS 10 Center Dr, Room B1D708A Bethesda MD. 20892-1148 ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Re: [Freesurfer] converting thickess file to ascii
Hi Adam, that's because the thickness file isn't a surface file. You need to tell it that it's curvature format. Something like: mris_convert -c lh.thickness lh.orig lh.thickness.asc as it needs to know the surface that it is associated with. cheers, Bruce On Wed, 26 Oct 2005, Thomas, Adam (NIH/NIMH) wrote: Can mris_convert be used to convert thickness files to ascii? My attempts so far have resulted in segfaults: [EMAIL PROTECTED] surf]$ mris_convert lh.thickness lh.thickness.asc Segmentation fault [EMAIL PROTECTED] surf]$ Or is there another way to convert thickness files to ascii? Thanks, -Adam --- Adam Thomas [EMAIL PROTECTED] Functional MRI Facility, NIMH/NIH/DHHS 10 Center Dr, Room B1D708A Bethesda MD. 20892-1148 ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
