I am also using dcm2nii and running recon-all with the original image. It is
working ok so far.
Alfredo
> Date: Fri, 2 Sep 2011 12:30:26 -0400
> From: gr...@nmr.mgh.harvard.edu
> To: cvalen...@linkdx.com.co
> CC: freesurfer@nmr.mgh.harvard.edu
> Subject: Re: [Freesurfer] dcm2nii and recon all
>
> I have no idea, but probably the original.
> doug
>
> Carolina Valencia wrote:
> > Dear FS' users,
> >
> > I have a 3D T1 from a GE scanner which I convert with dcm2nii to use
> > it with recon-all, but I got 3 images:
> > o -- original
> > oo -- orthogonal
> > co -- cropped image
> >
> > Which I should use to run the command recon-all?
> >
> > thanks!
> >
> > Carolina
> >
> >
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> --
> Douglas N. Greve, Ph.D.
> MGH-NMR Center
> gr...@nmr.mgh.harvard.edu
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