Re: [Freesurfer] help with this error

2013-06-03 Thread Douglas N Greve
It looks like you don't have permissions to that file. Try changing the 
permission with chmod (need to change them for all your dicom files)
doug
On 06/03/2013 06:17 PM, Manish Dalwani wrote:
> Dear Freesurfer's
>
> I have been using (a slightly older version) Freesurfer on linux and 
> it works fine. I just recently installed freesurfer on the mac 
> workstation OS X 10.8.1. I get the following error:
>
>
> server:subjects manishdalwani$ cd anat_5214
> server:anat_5214 manishdalwani$ recon-all -i MR100021.dcm -s 5214
> ERROR: MR100021.dcm exists but is not readable
> Darwin server.imaging.private 12.1.0 Darwin Kernel Version 12.1.0: Tue 
> Aug 14 13:29:55 PDT 2012; root:xnu-2050.9.2~1/RELEASE_X86_64 x86_64
>
> recon-all -s  exited with ERRORS at Mon Jun  3 15:57:24 MDT 2013
>
> For more details, see the log file
> To report a problem, see 
> http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
>
> Kindly help!
> Regards,
> Manish
>
>
> ___
> Freesurfer mailing list
> Freesurfer@nmr.mgh.harvard.edu
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

-- 
Douglas N. Greve, Ph.D.
MGH-NMR Center
gr...@nmr.mgh.harvard.edu
Phone Number: 617-724-2358
Fax: 617-726-7422

Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2
www.nmr.mgh.harvard.edu/facility/filedrop/index.html
Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/

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[Freesurfer] help with this error

2013-06-03 Thread Manish Dalwani
Dear Freesurfer's

I have been using (a slightly older version) Freesurfer on linux and it works 
fine. I just recently installed freesurfer on the mac workstation OS X 10.8.1. 
I get the following error:


server:subjects manishdalwani$ cd anat_5214
server:anat_5214 manishdalwani$ recon-all -i MR100021.dcm -s 5214
ERROR: MR100021.dcm exists but is not readable
Darwin server.imaging.private 12.1.0 Darwin Kernel Version 12.1.0: Tue Aug 14 
13:29:55 PDT 2012; root:xnu-2050.9.2~1/RELEASE_X86_64 x86_64

recon-all -s  exited with ERRORS at Mon Jun  3 15:57:24 MDT 2013

For more details, see the log file 
To report a problem, see http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting

Kindly help!
Regards,
Manish___
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer


The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.