[Freesurfer] longitudinal processing (base-tps error)

2012-04-11 Thread Sabin Khadka
HI all,
I ran longitudinal processing with
reco-all -base templateID -tp MRI_T1 -tp MRI_T2 -all

but in base-tps file of template ID I found the subject ID of MRI_T1 twice
instead of MRI_T1 and MRI_T2. I want to run recon-all -long which I am able
to do for MRI_T1 but could not do the same for MRI_T2.
ANy help would be appreciated.
Thanks
SK
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Re: [Freesurfer] longitudinal processing (base-tps error)

2012-04-11 Thread Martin Reuter
Hi Sabin,
If the base-tps file contains a time point twice, that indicates that it has 
been created by passing the same time point twice, probably a typo.
You need to remove the base and tp1.long and run again with the correct 
parameters.

Best Martin

On Apr 11, 2012, at 9:31, Sabin Khadka mr.sabinkha...@gmail.com wrote:

 HI all,
 I ran longitudinal processing with 
 reco-all -base templateID -tp MRI_T1 -tp MRI_T2 -all
 
 but in base-tps file of template ID I found the subject ID of MRI_T1 twice 
 instead of MRI_T1 and MRI_T2. I want to run recon-all -long which I am able 
 to do for MRI_T1 but could not do the same for MRI_T2.
 ANy help would be appreciated.
 Thanks
 SK
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 Freesurfer@nmr.mgh.harvard.edu
 https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

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but does not contain patient information, please contact the sender and properly
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