[Freesurfer] monkeys' surfaces registration

2007-09-19 Thread Marie Schaer 


Hello everybody,

I am working with monkeys brain, and I had trouble in both creating  
an average surface and co-registering the monkeys' surfaces together.
I was thus wondering if accessing the canonical spherical template  
and replacing it by a monkey template with less sulci would solve the  
problem? If yes, how can I specify to mris_sphere which template to  
use? If no, has someone a miracle solution to register monkeys'  
surfaces?


Many thanks,

Marie Schaer
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Re: [Freesurfer] monkeys' surfaces registration

2007-09-19 Thread Bruce Fischl 

Hi Marie,

the human template definitely isn't what you want for a monkey brain. Use 
mris_make_template to build a new target.


cheers,
Bruce


On Wed, 19 Sep 2007, Marie Schaer wrote:



Hello everybody,

I am working with monkeys brain, and I had trouble in both creating an 
average surface and co-registering the monkeys' surfaces together.
I was thus wondering if accessing the canonical spherical template and 
replacing it by a monkey template with less sulci would solve the problem? If 
yes, how can I specify to mris_sphere which template to use? If no, has 
someone a miracle solution to register monkeys' surfaces?


Many thanks,

Marie Schaer
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Freesurfer@nmr.mgh.harvard.edu
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