I get this behavior with --out_orientation, but not with
--in_orientation. Are you sure it happens with both? And are you sure
you want to be changing the orientation? If you have a volume from a
person in the scanner head-first supine, then the answer is almost
surely no.
doug
Reza Farivar wrote:
Hello,
I'm encountering a strange problem with mri_convert. Basically, if I just
ask it to convert a set of dicoms into a 4D NIFTI, it does this fine, but
if I specify anything about the input and/or output orientation (using
--in_orientation or --out_orientation), it only spits out 1 image, not the
entire time series. Am I doing something wrong?
Thanks,
Reza
||
Reza Farivar, Ph.D.
Research Fellow
Harvard Medical School
Massachusetts General Hospital
Dept. of Radiology
Building 149, Room 2301
13th Street
Charlestown, MA 02129
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