Re: [Freesurfer] pial surface file format
You should already have them. In your $FREESURFER_HOME dir there is a sub-dir called 'matlab'. I believe 'read_surf.m' is what you are looking for. -Louis On Wed, 14 Sep 2011, Jeff Eriksen wrote: Super! Please tell me how to obtain the m-files. -Jeff On 9/14/11 6:49 PM, Bruce Fischl fis...@nmr.mgh.harvard.edu wrote: Yes, and we provide m files for reading them Cheers Bruce On Sep 14, 2011, at 9:46 PM, Jeff Eriksen eriks...@ohsu.edu wrote: I wish to extract the pial and GW surfaces from their surface files to manipulate in Matlab. As far as I can determine, these are the files lRh.white and lrh.pial. Can someone please confirm this, and also confirm that these are in the triangle surface file binary format? If this is all true, I can proceed to opening and reading the meshes. Thanks, -Jeff Eriksen ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
[Freesurfer] pial surface file format
I wish to extract the pial and GW surfaces from their surface files to manipulate in Matlab. As far as I can determine, these are the files lRh.white and lrh.pial. Can someone please confirm this, and also confirm that these are in the triangle surface file binary format? If this is all true, I can proceed to opening and reading the meshes. Thanks, -Jeff Eriksen ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Re: [Freesurfer] pial surface file format
Yes, and we provide m files for reading them Cheers Bruce On Sep 14, 2011, at 9:46 PM, Jeff Eriksen eriks...@ohsu.edu wrote: I wish to extract the pial and GW surfaces from their surface files to manipulate in Matlab. As far as I can determine, these are the files lRh.white and lrh.pial. Can someone please confirm this, and also confirm that these are in the triangle surface file binary format? If this is all true, I can proceed to opening and reading the meshes. Thanks, -Jeff Eriksen ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Re: [Freesurfer] pial surface file format
Super! Please tell me how to obtain the m-files. -Jeff On 9/14/11 6:49 PM, Bruce Fischl fis...@nmr.mgh.harvard.edu wrote: Yes, and we provide m files for reading them Cheers Bruce On Sep 14, 2011, at 9:46 PM, Jeff Eriksen eriks...@ohsu.edu wrote: I wish to extract the pial and GW surfaces from their surface files to manipulate in Matlab. As far as I can determine, these are the files lRh.white and lrh.pial. Can someone please confirm this, and also confirm that these are in the triangle surface file binary format? If this is all true, I can proceed to opening and reading the meshes. Thanks, -Jeff Eriksen ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
