Re: [Freesurfer] strange freeview issue
thanks nick. tried with 5.1.0 same issue. here is the output from glxgears. $ glxgears Error: couldn't get an RGB, Double-buffered visual i am beginning to suspect it as a driver issue. cheers, satra On Wed, Sep 28, 2011 at 11:17 AM, Nick Schmansky ni...@nmr.mgh.harvard.eduwrote: i'm able to replicate what you see on my mac (leopard, w/ XQuartz) connecting via ssh -Y to a linux machine and running fs v5.0.0. however, freeview works in this setup using fs 5.1.0. the change between version is that freeview now uses Qt (instead of Wx). can you switch to v5.1.0? or copy the freeview from 5.1.0 to your 5.0.0 installation? you would need to copy: freesurfer/lib/qt freesurfer/bin/freeview freesurfer/bin/freeview.bin freesurver/bin/qt_setup.csh n. On Tue, 2011-09-27 at 20:40 -0400, Satrajit Ghosh wrote: hi, we are seeing a strange freeview issue at mit and just wanted to check if anybody else has seen this. we are running natty narwhal (ubuntu 11.04). details here: https://github.com/gablab/mindhive/issues/1 cheers, satra ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Re: [Freesurfer] strange freeview issue
its a shot in the dark, but you could try updating the mac with XQuartz, which seems to be much better for X stuff than the default X installation. doing so is a necessity for running freesurfer locally on the mac: https://surfer.nmr.mgh.harvard.edu/fswiki/MacTksurfer that page fixes a different issue, but its X related. also, on the linux machine, make sure the /etc/X11/xorg.conf file has Load glx in the Section Module n. On Wed, 2011-09-28 at 11:52 -0400, Satrajit Ghosh wrote: thanks nick. tried with 5.1.0 same issue. here is the output from glxgears. $ glxgears Error: couldn't get an RGB, Double-buffered visual i am beginning to suspect it as a driver issue. cheers, satra On Wed, Sep 28, 2011 at 11:17 AM, Nick Schmansky ni...@nmr.mgh.harvard.edu wrote: i'm able to replicate what you see on my mac (leopard, w/ XQuartz) connecting via ssh -Y to a linux machine and running fs v5.0.0. however, freeview works in this setup using fs 5.1.0. the change between version is that freeview now uses Qt (instead of Wx). can you switch to v5.1.0? or copy the freeview from 5.1.0 to your 5.0.0 installation? you would need to copy: freesurfer/lib/qt freesurfer/bin/freeview freesurfer/bin/freeview.bin freesurver/bin/qt_setup.csh n. On Tue, 2011-09-27 at 20:40 -0400, Satrajit Ghosh wrote: hi, we are seeing a strange freeview issue at mit and just wanted to check if anybody else has seen this. we are running natty narwhal (ubuntu 11.04). details here: https://github.com/gablab/mindhive/issues/1 cheers, satra ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
[Freesurfer] strange freeview issue
hi, we are seeing a strange freeview issue at mit and just wanted to check if anybody else has seen this. we are running natty narwhal (ubuntu 11.04). details here: https://github.com/gablab/mindhive/issues/1 cheers, satra ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Re: [Freesurfer] strange freeview issue
If you run 'glxgears' command, does it get similar error? Ruopeng On 9/27/11 8:40 PM, Satrajit Ghosh wrote: hi, we are seeing a strange freeview issue at mit and just wanted to check if anybody else has seen this. we are running natty narwhal (ubuntu 11.04). details here: https://github.com/gablab/mindhive/issues/1 cheers, satra ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
