Re: [Freesurfer] regress out signal

2022-12-16 Thread Douglas N. Greve 

I don't know what you mean, can you elaborate?

On 12/15/2022 1:38 PM, Mingyang Xia wrote:


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thank you for replying. Sometimes I meet the problem that the document 
says that Tr is 3s but when I use make-analysis it says that the file 
is 2.2s and then it could not work. How to solve this problem?

Best regards
Mingyang Xia

Douglas N. Greve  于 2022年12月12日周一 
上午7:40写道：


regressing out is the analysis. You'll have to create an
"analysis" with mkanalysis-sess, then run selxavg3-sess with
-svres to save the residual.

On 12/7/2022 12:04 AM, Mingyang Xia wrote:


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Dear Freesurfer expert:
  After I used ' fcseed-config' to get wm.dat and csf.dat, how
could I get the signal of each voxel that regresses out the
nuisance. I do not want to do the analysis. I just want to get
the signal after regressing out nuisance.
  Thank you
  Mingyang Xia

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Re: [Freesurfer] regress out signal

2022-12-15 Thread Mingyang Xia 
External Email - Use Caution

thank you for replying. Sometimes I meet the problem that the document says
that Tr is 3s but when I use make-analysis it says that the file is 2.2s
and then it could not work. How to solve this problem?
Best regards
Mingyang Xia

Douglas N. Greve  于 2022年12月12日周一 上午7:40写道：

> regressing out is the analysis. You'll have to create an "analysis" with
> mkanalysis-sess, then run selxavg3-sess with -svres to save the residual.
>
> On 12/7/2022 12:04 AM, Mingyang Xia wrote:
>
> External Email - Use Caution
> Dear Freesurfer expert:
>   After I used ' fcseed-config' to get wm.dat and csf.dat, how could I
> get the signal of each voxel that regresses out the nuisance. I do not want
> to do the analysis. I just want to get the signal after regressing out
> nuisance.
>   Thank you
>   Mingyang Xia
>
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Re: [Freesurfer] regress out signal

2022-12-12 Thread Douglas N. Greve 
regressing out is the analysis. You'll have to create an "analysis" with 
mkanalysis-sess, then run selxavg3-sess with -svres to save the residual.


On 12/7/2022 12:04 AM, Mingyang Xia wrote:


External Email - Use Caution

Dear Freesurfer expert:
  After I used ' fcseed-config' to get wm.dat and csf.dat, how could I 
get the signal of each voxel that regresses out the nuisance. I do not 
want to do the analysis. I just want to get the signal after 
regressing out nuisance.

  Thank you
  Mingyang Xia

___
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
___
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https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is 
addressed.  If you believe this e-mail was sent to you in error and the e-mail 
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Compliance HelpLine at https://www.massgeneralbrigham.org/complianceline 
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Please note that this e-mail is not secure (encrypted).  If you do not wish to 
continue communication over unencrypted e-mail, please notify the sender of 
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