Re: [galaxy-dev] Installing galaxy with Apache

[Matthias Enders]

Hi John,

your solution perfectly solved my problem.

Thank you!

-Ursprüngliche Nachricht-
Von: John Chilton [mailto:jmchil...@gmail.com] 
Gesendet: Friday, June 06, 2014 3:32 PM
An: Matthias Enders
Cc: galaxy-...@bx.psu.edu
Betreff: Re: [galaxy-dev] Installing galaxy with Apache

Hmm... sorry for the delay I hope you got this to work. I feel like someone 
should respond to this but it is difficult to remotely debug web server 
configuration issues.

Should your apache config line:

RewriteRule ^(.*) http://localhost:8080$1 [P]

be:

RewriteRule ^/galaxy(.*) http://localhost:8080$1 [P]

instead?

That is the only guess I have. Thanks for your interest in deploying Galaxy.

-John


On Mon, Jun 2, 2014 at 7:37 AM, Matthias Enders 
 wrote:
> Hi,
>
>
>
> this thread is likely related to this one:
>
>
>
> http://user.list.galaxyproject.org/Installing-galaxy-with-Apache-td465
> 4499.html
>
>
>
> I installed Galaxy on a Ubuntu Server 12.04 system. I followed the 
> instruction on the link mentioned above and this one:
>
> https://wiki.galaxyproject.org/Admin/Config/ApacheProxy
>
>
>
> Now my issue is:
>
>
>
> When I got this configuration in my /etc/apache2/sites-available/default :
>
>
>
> RewriteEngine on
>
> RewriteRule ^/galaxy$ /galaxy/ [R]
>
> RewriteRule ^/galaxy/static/style/(.*)
> /home/galaxy/galaxy-dist/static/june_2007_style/blue/$1 [L]
>
> RewriteRule ^/galaxy/static/scripts/(.*)
> /home/galaxy/galaxy-dist/static/scripts/packed/$1 [L]
>
> RewriteRule ^/galaxy/static/(.*) /home/galaxy/galaxy-dist/static/$1 
> [L]
>
> RewriteRule ^/galaxy/favicon.ico 
> /home/galaxy/galaxy-dist/static/favicon.ico
> [L]
>
> RewriteRule ^/galaxy/robots.txt 
> /home/galaxy/galaxy-dist/static/robots.txt
> [L]
>
> RewriteRule ^(.*) http://localhost:8080$1 [P]
>
>
>
> Galaxy is visible at www.my_server_url.de but not at 
> www.my_server_url.de/galaxy
>
>
>
> Following the later URL I got this message:
>
> Proxy Error
>
> The proxy server received an invalid response from an upstream server.
> The proxy server could not handle the request GET /galaxy.
>
> Reason: DNS lookup failure for: localhost:8080http:
>
> 
> Apache/2.2.22 (Ubuntu) Server at www.my_server_url.de Port 80
>
> When I change the configuration like this: (make the second line a comment):
>
>
>
> RewriteEngine on
>
> #RewriteRule ^/galaxy$ /galaxy/ [R]
>
> RewriteRule ^/galaxy/static/style/(.*)
> /home/galaxy/galaxy-dist/static/june_2007_style/blue/$1 [L]
>
> RewriteRule ^/galaxy/static/scripts/(.*)
> /home/galaxy/galaxy-dist/static/scripts/packed/$1 [L]
>
> RewriteRule ^/galaxy/static/(.*) /home/galaxy/galaxy-dist/static/$1 
> [L]
>
> RewriteRule ^/galaxy/favicon.ico 
> /home/galaxy/galaxy-dist/static/favicon.ico
> [L]
>
> RewriteRule ^/galaxy/robots.txt 
> /home/galaxy/galaxy-dist/static/robots.txt
> [L]
>
> RewriteRule ^(.*) http://localhost:8080$1 [P]
>
>
>
> Galaxy is visible both at www.my_server_url.de and at 
> www.my_server_url.de/galaxy
>
>
>
> When I completely remove this part, the “It works!” standard page of 
> apache is displayed.
>
>
>
> The configuration in my universe.ini is as follows:
>
> host = 127.0.0.1
>
>
>
> [filter:proxy-prefix]
>
> use = egg:PasteDeploy#prefix
>
> prefix = /galaxy
>
>
>
> [app:main]
>
> filter-with = proxy-prefix
>
> cookie_path = /galaxy
>
>
>
> Can you please help me with this issue?
>
> I want to see the “It works!” page at www.my_server_url.de and galaxy 
> only at www.my_server_urla.de/galaxy.
>
>
>
> Thanks in advance!
>
>
>
> Kind regards
>
> Matthias Enders
>
>
> ___
> Please keep all replies on the list by using "reply all"
> in your mail client.  To manage your subscriptions to this and other 
> Galaxy lists, please use the interface at:
>   http://lists.bx.psu.edu/
>
> To search Galaxy mailing lists use the unified search at:
>   http://galaxyproject.org/search/mailinglists/

___
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  http://lists.bx.psu.edu/

To search Galaxy mailing lists use the unified search at:
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Re: [galaxy-dev] Installing galaxy with Apache

[John Chilton]

Hmm... sorry for the delay I hope you got this to work. I feel like
someone should respond to this but it is difficult to remotely debug
web server configuration issues.

Should your apache config line:

RewriteRule ^(.*) http://localhost:8080$1 [P]

be:

RewriteRule ^/galaxy(.*) http://localhost:8080$1 [P]

instead?

That is the only guess I have. Thanks for your interest in deploying Galaxy.

-John


On Mon, Jun 2, 2014 at 7:37 AM, Matthias Enders
 wrote:
> Hi,
>
>
>
> this thread is likely related to this one:
>
>
>
> http://user.list.galaxyproject.org/Installing-galaxy-with-Apache-td4654499.html
>
>
>
> I installed Galaxy on a Ubuntu Server 12.04 system. I followed the
> instruction on the link mentioned above and this one:
>
> https://wiki.galaxyproject.org/Admin/Config/ApacheProxy
>
>
>
> Now my issue is:
>
>
>
> When I got this configuration in my /etc/apache2/sites-available/default :
>
>
>
> RewriteEngine on
>
> RewriteRule ^/galaxy$ /galaxy/ [R]
>
> RewriteRule ^/galaxy/static/style/(.*)
> /home/galaxy/galaxy-dist/static/june_2007_style/blue/$1 [L]
>
> RewriteRule ^/galaxy/static/scripts/(.*)
> /home/galaxy/galaxy-dist/static/scripts/packed/$1 [L]
>
> RewriteRule ^/galaxy/static/(.*) /home/galaxy/galaxy-dist/static/$1 [L]
>
> RewriteRule ^/galaxy/favicon.ico /home/galaxy/galaxy-dist/static/favicon.ico
> [L]
>
> RewriteRule ^/galaxy/robots.txt /home/galaxy/galaxy-dist/static/robots.txt
> [L]
>
> RewriteRule ^(.*) http://localhost:8080$1 [P]
>
>
>
> Galaxy is visible at www.my_server_url.de but not at
> www.my_server_url.de/galaxy
>
>
>
> Following the later URL I got this message:
>
> Proxy Error
>
> The proxy server received an invalid response from an upstream server.
> The proxy server could not handle the request GET /galaxy.
>
> Reason: DNS lookup failure for: localhost:8080http:
>
> 
> Apache/2.2.22 (Ubuntu) Server at www.my_server_url.de Port 80
>
> When I change the configuration like this: (make the second line a comment):
>
>
>
> RewriteEngine on
>
> #RewriteRule ^/galaxy$ /galaxy/ [R]
>
> RewriteRule ^/galaxy/static/style/(.*)
> /home/galaxy/galaxy-dist/static/june_2007_style/blue/$1 [L]
>
> RewriteRule ^/galaxy/static/scripts/(.*)
> /home/galaxy/galaxy-dist/static/scripts/packed/$1 [L]
>
> RewriteRule ^/galaxy/static/(.*) /home/galaxy/galaxy-dist/static/$1 [L]
>
> RewriteRule ^/galaxy/favicon.ico /home/galaxy/galaxy-dist/static/favicon.ico
> [L]
>
> RewriteRule ^/galaxy/robots.txt /home/galaxy/galaxy-dist/static/robots.txt
> [L]
>
> RewriteRule ^(.*) http://localhost:8080$1 [P]
>
>
>
> Galaxy is visible both at www.my_server_url.de and at
> www.my_server_url.de/galaxy
>
>
>
> When I completely remove this part, the “It works!” standard page of apache
> is displayed.
>
>
>
> The configuration in my universe.ini is as follows:
>
> host = 127.0.0.1
>
>
>
> [filter:proxy-prefix]
>
> use = egg:PasteDeploy#prefix
>
> prefix = /galaxy
>
>
>
> [app:main]
>
> filter-with = proxy-prefix
>
> cookie_path = /galaxy
>
>
>
> Can you please help me with this issue?
>
> I want to see the “It works!” page at www.my_server_url.de and galaxy only
> at www.my_server_urla.de/galaxy.
>
>
>
> Thanks in advance!
>
>
>
> Kind regards
>
> Matthias Enders
>
>
> ___
> Please keep all replies on the list by using "reply all"
> in your mail client.  To manage your subscriptions to this
> and other Galaxy lists, please use the interface at:
>   http://lists.bx.psu.edu/
>
> To search Galaxy mailing lists use the unified search at:
>   http://galaxyproject.org/search/mailinglists/

___
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  http://lists.bx.psu.edu/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/

[galaxy-dev] Installing galaxy with Apache

[Matthias Enders]

Hi,

this thread is likely related to this one:

http://user.list.galaxyproject.org/Installing-galaxy-with-Apache-td4654499.html

I installed Galaxy on a Ubuntu Server 12.04 system. I followed the instruction 
on the link mentioned above and this one:
https://wiki.galaxyproject.org/Admin/Config/ApacheProxy

Now my issue is:

When I got this configuration in my /etc/apache2/sites-available/default :

RewriteEngine on
RewriteRule ^/galaxy$ /galaxy/ [R]
RewriteRule ^/galaxy/static/style/(.*) 
/home/galaxy/galaxy-dist/static/june_2007_style/blue/$1 [L]
RewriteRule ^/galaxy/static/scripts/(.*) 
/home/galaxy/galaxy-dist/static/scripts/packed/$1 [L]
RewriteRule ^/galaxy/static/(.*) /home/galaxy/galaxy-dist/static/$1 [L]
RewriteRule ^/galaxy/favicon.ico /home/galaxy/galaxy-dist/static/favicon.ico [L]
RewriteRule ^/galaxy/robots.txt /home/galaxy/galaxy-dist/static/robots.txt [L]
RewriteRule ^(.*) http://localhost:8080$1 [P]

Galaxy is visible at www.my_server_url.de but not 
at www.my_server_url.de/galaxy

Following the later URL I got this message:
Proxy Error

The proxy server received an invalid response from an upstream server.
The proxy server could not handle the request GET 
/galaxy.

Reason: DNS lookup failure for: localhost:8080http:


Apache/2.2.22 (Ubuntu) Server at www.my_server_url.de Port 80


When I change the configuration like this: (make the second line a comment):

RewriteEngine on
#RewriteRule ^/galaxy$ /galaxy/ [R]
RewriteRule ^/galaxy/static/style/(.*) 
/home/galaxy/galaxy-dist/static/june_2007_style/blue/$1 [L]
RewriteRule ^/galaxy/static/scripts/(.*) 
/home/galaxy/galaxy-dist/static/scripts/packed/$1 [L]
RewriteRule ^/galaxy/static/(.*) /home/galaxy/galaxy-dist/static/$1 [L]
RewriteRule ^/galaxy/favicon.ico /home/galaxy/galaxy-dist/static/favicon.ico [L]
RewriteRule ^/galaxy/robots.txt /home/galaxy/galaxy-dist/static/robots.txt [L]
RewriteRule ^(.*) http://localhost:8080$1 [P]

Galaxy is visible both at www.my_server_url.de and 
at www.my_server_url.de/galaxy

When I completely remove this part, the "It works!" standard page of apache is 
displayed.

The configuration in my universe.ini is as follows:
host = 127.0.0.1

[filter:proxy-prefix]
use = egg:PasteDeploy#prefix
prefix = /galaxy

[app:main]
filter-with = proxy-prefix
cookie_path = /galaxy

Can you please help me with this issue?
I want to see the "It works!" page at 
www.my_server_url.de and galaxy only at 
www.my_server_urla.de/galaxy.

Thanks in advance!

Kind regards
Matthias Enders
___
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  http://lists.bx.psu.edu/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/