[galaxy-dev] Trackster cannot display INTERVAL or GATK-INTERVAL files???

2012-03-19 Thread Anthonius deBoer
It seems that trackster does not know how to display INTERVAL files?Is that true? Surely there is an easy way to support those kinds of simple files without having to convert them?Am I missing something?I also don't seem to be able to convert an interval file into a BED file?Thanks,Thon
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Re: [galaxy-dev] Trackster cannot display INTERVAL or GATK-INTERVAL files???

2012-03-19 Thread Anthonius deBoer
Oh wait..It's in the info section...Weird place for a conversion tool but it is there :)On Mar 19, 2012, at 12:02 PM, Anthonius deBoer thondeb...@me.com wrote:It seems that trackster does not know how to display INTERVAL files?Is that true? Surely there is an easy way to support those kinds of simple files without having to convert them?Am I missing something?I also don't seem to be able to convert an interval file into a BED file?Thanks,Thon___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at:  http://lists.bx.psu.edu/___
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Re: [galaxy-dev] Trackster cannot display INTERVAL or GATK-INTERVAL files???

2012-03-19 Thread Jeremy Goecks
Thon,

 It seems that trackster does not know how to display INTERVAL files?
 Is that true?

Yes, this is currently a limitation. However, most of the work is done that is 
necessary to make this happen, so it should be done soon, definitely in the 
next month or two.

 Surely there is an easy way to support those kinds of simple files without 
 having to convert them?

As you discovered, conversions can be done by clicking on the pencil icon and 
then performing the conversion. We're aware that isn't ideal for usability and 
plan to improve it in the future.

J.
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