Re: [galaxy-dev] Looking for a running example of planemo test with options from_data_table

2018-02-15 Thread nsora...@tiscali.it
Dear Laure,have a look at 
https://github.com/galaxyproject/tools-devteam/blob/master/tools/bowtie_wrappers/bowtie_wrapper.xml
Cheers,Nicola
-- Messaggio originale--Da: Laure QUINTRICData: gio 15 feb 2018 16:06A: 
galaxy-dev@lists.galaxyproject.org;CC: Patrick Durand;Olivier 
Inizan;Oggetto:[galaxy-dev] Looking for a running example of planemo test with 
options from_data_table
Dear list,

Is there somewhere in the Galaxy any running example of a planemo test 
embracing a from_data_table option ?

We are trying to reproduce the picard example referenced here:
https://github.com/jmchilton/picard/commit/4df8974384081ee1bb0f97e1bb8d7f935ba09d73#diff-4145b3df5cbab370b2450e33dc343c3a

We also have a look on several examples on the IUC, unfortunately it 
seems to work only with values from history.

Many thanks,

Laure, Patrick and Olivier.
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[galaxy-dev] Looking for a running example of planemo test with options from_data_table

2018-02-15 Thread Laure QUINTRIC

Dear list,

Is there somewhere in the Galaxy any running example of a planemo test 
embracing a from_data_table option ?


We are trying to reproduce the picard example referenced here:
https://github.com/jmchilton/picard/commit/4df8974384081ee1bb0f97e1bb8d7f935ba09d73#diff-4145b3df5cbab370b2450e33dc343c3a

We also have a look on several examples on the IUC, unfortunately it 
seems to work only with values from history.


Many thanks,

Laure, Patrick and Olivier.
___
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
 https://lists.galaxyproject.org/

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 http://galaxyproject.org/search/