Re: [galaxy-user] Peep view for history elements broken on IE?

[Kanwei Li]

Hi Peter,

Is this still an issue? The error you describe sounds like a jStore
problem but I tested it in IE7 and it works.

Thanks,

Kanwei

On Fri, Dec 17, 2010 at 6:34 AM, Peter  wrote:
> Hi all,
>
> I've recently been testing Galaxy on Microsoft Internet Explorer,
> IE6 and now IE7. It seems that the "peep" view for history entries
> isn't supported. The history elements' names are not links, so
> clicking on them does not make them expand to show the info
> (e.g. number of sequences of file size, and the start of the data).
>
> This happens both on the public Galaxy instance at Penn State
> (http://usegalaxy.org) and our local Galaxy instance.
>
> Is this a known issue?
>
> Peter
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[galaxy-user] Extract sequences from [gtf file] + [genome FASTA file]

[Karen Tang]

Hi Galaxy people,

I have transcripts predicted by Cufflinks that are in a gtf 
file. How can I extract the sequences corresponding to those 
transcripts, using Galaxy?


[Cufflinks transcript predictions in gtf file] + [Genome sequence in FASTA 
file] ---> [FASTA file of transcript sequences]

My genome is a custom genome (not at UCSC).

-

I'll also need to do the same thing, except my predicted 
transcripts are in a Scripture bed file.


Thanks for your help!

Karen Tang :)
Plant Biology
University of Minnesota

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