[galaxy-user] download contains the html file
Hi, I have a tool that works well. However, when I download the results, the results are zipped up but included into the zip file is the *.html file (with the same name as the tool output) do you know how I can stop this from being zipped up? Thanks Neil ___ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using reply all in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list: http://lists.bx.psu.edu/listinfo/galaxy-dev To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
Re: [galaxy-user] download contains the html file
Sorry I should have provided more detail. After I have executed my tool, I write the html into the dataset_'id'.dat file listing all the output files which I store in extra_files_path (named as dataset_id_files in the database). Thus when I do a download I only want the files stored in dataset_id_files downloaded I don't want/need dataset_'id'.dat, too. Can I stop dataset_id.dat from being included in the zip file? I was thinking I may need to change act_on_multiple_datasets in ~./lib/galaxy/webapps/galaxy/controllers/library_common.py . However, it doesn't seem that this function is called when you click on the download icon on the history panel. Thanks Neil From: Burdett, Neil (CCI, Herston - RBWH) Sent: Friday, 10 January 2014 1:45 PM To: galaxy-user@lists.bx.psu.edu Subject: download contains the html file Hi, I have a tool that works well. However, when I download the results, the results are zipped up but included into the zip file is the *.html file (with the same name as the tool output) do you know how I can stop this from being zipped up? Thanks Neil ___ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using reply all in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list: http://lists.bx.psu.edu/listinfo/galaxy-dev To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
Re: [galaxy-user] download contains the html file
For those following this thread. I, finally, managed to stop zipping up the html file by commenting out the try block (around line 260) in ~/lib/galaxy/datatypes/data.py Thanks Neil From: Burdett, Neil (CCI, Herston - RBWH) Sent: Friday, 10 January 2014 3:28 PM To: galaxy-user@lists.bx.psu.edu Subject: RE: download contains the html file Sorry I should have provided more detail. After I have executed my tool, I write the html into the dataset_'id'.dat file listing all the output files which I store in extra_files_path (named as dataset_id_files in the database). Thus when I do a download I only want the files stored in dataset_id_files downloaded I don't want/need dataset_'id'.dat, too. Can I stop dataset_id.dat from being included in the zip file? I was thinking I may need to change act_on_multiple_datasets in ~./lib/galaxy/webapps/galaxy/controllers/library_common.py . However, it doesn't seem that this function is called when you click on the download icon on the history panel. Thanks Neil From: Burdett, Neil (CCI, Herston - RBWH) Sent: Friday, 10 January 2014 1:45 PM To: galaxy-user@lists.bx.psu.edumailto:galaxy-user@lists.bx.psu.edu Subject: download contains the html file Hi, I have a tool that works well. However, when I download the results, the results are zipped up but included into the zip file is the *.html file (with the same name as the tool output) do you know how I can stop this from being zipped up? Thanks Neil ___ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using reply all in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list: http://lists.bx.psu.edu/listinfo/galaxy-dev To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
