[gentoo-commits] proj/sci:master commit in: dev-python/isal/
commit: 593ddc3f696bc51a2fe84568a5641972494e4a77 Author: Alexey Shvetsov gentoo org> AuthorDate: Sun Sep 29 13:15:57 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Sun Sep 29 13:33:21 2024 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=593ddc3f dev-python/isal: new package, add 1.6.1 Signed-off-by: Alexey Shvetsov gentoo.org> dev-python/isal/isal-1.6.1.ebuild | 24 dev-python/isal/metadata.xml | 16 2 files changed, 40 insertions(+) diff --git a/dev-python/isal/isal-1.6.1.ebuild b/dev-python/isal/isal-1.6.1.ebuild new file mode 100644 index 0..7e7925217 --- /dev/null +++ b/dev-python/isal/isal-1.6.1.ebuild @@ -0,0 +1,24 @@ +# Copyright 1999-2024 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +PYTHON_COMPAT=( python3_{10..13} ) +DISTUTILS_USE_PEP517=setuptools +inherit distutils-r1 pypi + +DESCRIPTION="Faster zlib, gzip compatible (de)compression using ISA-L library" +HOMEPAGE="https://github.com/pycompression/python-isal https://pypi.org/project/isal"; + +LICENSE="PSF-2" +SLOT="0" +KEYWORDS="amd64 arm arm64 x86" +IUSE="test" +RESTRICT="!test? ( test )" + +DOCS="README.rst" + +distutils_enable_sphinx doc \ + dev-python/sphinx-rtd-theme + +distutils_enable_tests pytest diff --git a/dev-python/isal/metadata.xml b/dev-python/isal/metadata.xml new file mode 100644 index 0..fe89c9138 --- /dev/null +++ b/dev-python/isal/metadata.xml @@ -0,0 +1,16 @@ + +http://www.gentoo.org/dtd/metadata.dtd";> + + +b...@edevau.net +Andreas Billmeier + + +isal +pycompression/python-isal + + r.h.p.vorder...@lumc.nl + Leiden University Medical Center + + +
[gentoo-commits] proj/sci:master commit in: dev-python/dnaio/
commit: 421ae19c6a1e8b7c8f2d42990d9a951d1e4aa0a2 Author: Alexey Shvetsov gentoo org> AuthorDate: Sun Sep 29 13:26:44 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Sun Sep 29 13:33:30 2024 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=421ae19c dev-python/dnaio: new package, add 1.2.1 Signed-off-by: Alexey Shvetsov gentoo.org> dev-python/dnaio/dnaio-1.2.1.ebuild | 27 +++ dev-python/dnaio/metadata.xml | 12 2 files changed, 39 insertions(+) diff --git a/dev-python/dnaio/dnaio-1.2.1.ebuild b/dev-python/dnaio/dnaio-1.2.1.ebuild new file mode 100644 index 0..63e3d4201 --- /dev/null +++ b/dev-python/dnaio/dnaio-1.2.1.ebuild @@ -0,0 +1,27 @@ +# Copyright 1999-2020 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +PYTHON_COMPAT=( python3_{10..13} ) +DISTUTILS_USE_PEP517=setuptools + +inherit distutils-r1 pypi + +DESCRIPTION="dnaio processes FASTQ, FASTA and uBAM files" +HOMEPAGE="https://github.com/marcelm/dnaio/"; +SRC_URI="$(pypi_sdist_url "${PN^}" "${PV}")" + +LICENSE="MIT" +SLOT="0" +KEYWORDS="~amd64" + +IUSE="test" +DEPEND=" + dev-python/xopen[${PYTHON_USEDEP}] +" +RDEPEND=" + ${DEPEND} + test? ( dev-python/pytest ) +" +distutils_enable_tests pytest diff --git a/dev-python/dnaio/metadata.xml b/dev-python/dnaio/metadata.xml new file mode 100644 index 0..7151605a5 --- /dev/null +++ b/dev-python/dnaio/metadata.xml @@ -0,0 +1,12 @@ + +http://www.gentoo.org/dtd/metadata.dtd";> + + + s...@gentoo.org + Gentoo Science + + + DNAio + marcelm/dnaio + +
[gentoo-commits] proj/sci:master commit in: sci-biology/cutadapt/
commit: fd08b2a5d7d48adea7a3f1d07d3783c15ce0f24b Author: Alexey Shvetsov gentoo org> AuthorDate: Sun Sep 29 13:31:30 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Sun Sep 29 13:33:31 2024 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=fd08b2a5 sci-biology/cutadapt: new package, add 4.9 Signed-off-by: Alexey Shvetsov gentoo.org> sci-biology/cutadapt/cutadapt-4.9.ebuild | 28 sci-biology/cutadapt/metadata.xml| 12 2 files changed, 40 insertions(+) diff --git a/sci-biology/cutadapt/cutadapt-4.9.ebuild b/sci-biology/cutadapt/cutadapt-4.9.ebuild new file mode 100644 index 0..cd1a8fe7c --- /dev/null +++ b/sci-biology/cutadapt/cutadapt-4.9.ebuild @@ -0,0 +1,28 @@ +# Copyright 1999-2020 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +PYTHON_COMPAT=( python3_{10..13} ) +DISTUTILS_USE_PEP517=setuptools + +inherit distutils-r1 pypi + +DESCRIPTION="Adapter trimming and other preprocessing of high-throughput sequencing reads" +HOMEPAGE="https://github.com/marcelm/cutadapt/"; +SRC_URI="$(pypi_sdist_url "${PN^}" "${PV}")" + +LICENSE="MIT" +SLOT="0" +KEYWORDS="~amd64" + +IUSE="test" +DEPEND=" + >=dev-python/xopen-1.6.0[${PYTHON_USEDEP}] + >=dev-python/dnaio-1.2.0[${PYTHON_USEDEP}] +" +RDEPEND=" + ${DEPEND} + test? ( dev-python/pytest ) +" +distutils_enable_tests pytest diff --git a/sci-biology/cutadapt/metadata.xml b/sci-biology/cutadapt/metadata.xml new file mode 100644 index 0..028038de8 --- /dev/null +++ b/sci-biology/cutadapt/metadata.xml @@ -0,0 +1,12 @@ + +http://www.gentoo.org/dtd/metadata.dtd";> + + + s...@gentoo.org + Gentoo Science + + + cutadapt + marcelm/cutadapt + +
[gentoo-commits] proj/sci:master commit in: dev-python/xopen/
commit: 9fe55c139ea0af511852aba3f3d764d8e9263b50 Author: Alexey Shvetsov gentoo org> AuthorDate: Sun Sep 29 13:23:41 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Sun Sep 29 13:33:27 2024 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=9fe55c13 dev-python/xopen: new package, add 2.0.2 Signed-off-by: Alexey Shvetsov gentoo.org> dev-python/xopen/metadata.xml | 12 dev-python/xopen/xopen-2.0.2.ebuild | 28 2 files changed, 40 insertions(+) diff --git a/dev-python/xopen/metadata.xml b/dev-python/xopen/metadata.xml new file mode 100644 index 0..9d5d13024 --- /dev/null +++ b/dev-python/xopen/metadata.xml @@ -0,0 +1,12 @@ + +http://www.gentoo.org/dtd/metadata.dtd";> + + + s...@gentoo.org + Gentoo Science + + + Xopen + marcelm/xopen + + diff --git a/dev-python/xopen/xopen-2.0.2.ebuild b/dev-python/xopen/xopen-2.0.2.ebuild new file mode 100644 index 0..3e94dcbb3 --- /dev/null +++ b/dev-python/xopen/xopen-2.0.2.ebuild @@ -0,0 +1,28 @@ +# Copyright 1999-2020 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +PYTHON_COMPAT=( python3_{10..13} ) +DISTUTILS_USE_PEP517=setuptools + +inherit distutils-r1 pypi + +DESCRIPTION="Open compressed files transparently" +HOMEPAGE="https://github.com/marcelm/xopen/"; +SRC_URI="$(pypi_sdist_url "${PN^}" "${PV}")" + +LICENSE="MIT" +SLOT="0" +KEYWORDS="~amd64" + +IUSE="test" +DEPEND=" + dev-python/isal[${PYTHON_USEDEP}] + sys-libs/zlib-ng +" +RDEPEND=" + ${DEPEND} + test? ( dev-python/pytest ) +" +distutils_enable_tests pytest
[gentoo-commits] repo/gentoo:master commit in: media-gfx/freecad/
commit: 19b3eac48c776844de60e254717be515ed7d Author: Alexey Shvetsov gentoo org> AuthorDate: Sat Sep 14 19:58:42 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Sat Sep 14 19:59:18 2024 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=19b3eac4 media-gfx/freecad: add 1.0_rc1 Signed-off-by: Alexey Shvetsov gentoo.org> media-gfx/freecad/Manifest | 1 + media-gfx/freecad/freecad-1.0_rc1.ebuild | 388 +++ 2 files changed, 389 insertions(+) diff --git a/media-gfx/freecad/Manifest b/media-gfx/freecad/Manifest index 9f6735199db5..064d27114445 100644 --- a/media-gfx/freecad/Manifest +++ b/media-gfx/freecad/Manifest @@ -1 +1,2 @@ DIST freecad-0.21.2.tar.gz 66124278 BLAKE2B 84a4f8008192cd1a2ee1737b537b2668a8c028aa8c8645e6e412ab9ef79bf3bdd2cb73d96fcfd2dbcff613cdcc59cbab95821406acdc9cd7d4eb4636c081be78 SHA512 bd7e9029b24d49ac0955797bcdbea1fd0826bdf9ab246135366dfc35b427004f103acccfc66d008e3ab3928f99e04200e335908a03166545554e2d3e969ae0f5 +DIST freecad-1.0_rc1.tar.gz 88552055 BLAKE2B 3e2607d87da86edd35c05abba0d7085bed7fc42f9831c7e2451e028b3ce267c7a1e44b82c9a51bdfc736b5c98198030aafb81a7ae5df158ae17bc5afe2df44e0 SHA512 1d0a0d131c35ee03b435a0b901cb56c8e98ce2dd62ff5102856b3777dfc6d3bfba6ff4ea87e8c8949640bd14fdb775db3e9eb9a8b6530dd1f86a903037c95dba diff --git a/media-gfx/freecad/freecad-1.0_rc1.ebuild b/media-gfx/freecad/freecad-1.0_rc1.ebuild new file mode 100644 index ..cfc5732f206f --- /dev/null +++ b/media-gfx/freecad/freecad-1.0_rc1.ebuild @@ -0,0 +1,388 @@ +# Copyright 1999-2024 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +PYTHON_COMPAT=( python3_{10..12} ) + +inherit check-reqs cmake flag-o-matic optfeature python-single-r1 qmake-utils xdg + +DESCRIPTION="QT based Computer Aided Design application" +HOMEPAGE="https://www.freecad.org/ https://github.com/FreeCAD/FreeCAD"; + +MY_PN=FreeCAD +MY_PV="${PV/_/}" + +if [[ ${PV} = * ]]; then + inherit git-r3 + EGIT_REPO_URI="https://github.com/${MY_PN}/${MY_PN}.git"; + S="${WORKDIR}/freecad-${PV}" +else + SRC_URI="https://github.com/${MY_PN}/${MY_PN}/archive/refs/tags/${MY_PV}.tar.gz -> ${P}.tar.gz" + KEYWORDS="~amd64" + S="${WORKDIR}/FreeCAD-${MY_PV}" +fi + +# code is licensed LGPL-2 +# examples are licensed CC-BY-SA (without note of specific version) +LICENSE="LGPL-2 CC-BY-SA-4.0" +SLOT="0" +IUSE="debug designer +gui qt6 test" + +FREECAD_EXPERIMENTAL_MODULES="cloud netgen pcl" +FREECAD_STABLE_MODULES="addonmgr fem idf image inspection material + openscad part-design path points raytracing robot show surface + techdraw tux" + +for module in ${FREECAD_STABLE_MODULES}; do + IUSE="${IUSE} +${module}" +done +for module in ${FREECAD_EXPERIMENTAL_MODULES}; do + IUSE="${IUSE} ${module}" +done +unset module + +RESTRICT="!test? ( test )" + +RDEPEND=" + ${PYTHON_DEPS} + dev-cpp/yaml-cpp + dev-libs/OpenNI2[opengl(+)] + dev-libs/boost:= + dev-libs/libfmt:= + dev-libs/libspnav[X] + dev-libs/xerces-c[icu] + !qt6? ( + dev-qt/qtconcurrent:5 + dev-qt/qtcore:5 + dev-qt/qtnetwork:5 + dev-qt/qtxml:5 + dev-qt/qtxmlpatterns:5 + ) + qt6? ( + dev-qt/qtbase:6[concurrent,network,xml] + ) + media-libs/freetype + media-libs/qhull:= + sci-libs/hdf5:=[fortran,zlib] + >=sci-libs/med-4.0.0-r1 + sci-libs/opencascade:=[json,vtk] + sci-libs/orocos_kdl:= + sys-libs/zlib + virtual/libusb:1 + cloud? ( + dev-libs/openssl:= + net-misc/curl + ) + fem? ( + !qt6? ( sci-libs/vtk:=[qt5,rendering] ) + qt6? ( sci-libs/vtk:=[-qt5,qt6,rendering] ) + ) + gui? ( + >=media-libs/coin-4.0.0 + virtual/glu + virtual/opengl + !qt6? ( + dev-qt/designer:5 + dev-qt/qtgui:5 + dev-qt/qtopengl:5 + dev-qt/qtprintsupport:5 + dev-qt/qtsvg:5 + dev-qt/qtwebengine:5[widgets] + dev-qt/qtwidgets:5 + dev-qt/qtx11extras:5 + pcl? ( sci-libs/pcl[qt5] ) + $(python_gen_cond_dep ' + dev-python/matplotlib[${PYTHON_USEDEP}] + >=dev-python/pivy-0.6.5[${PYTHON_USEDEP}] + dev-python/pyside2:=[gui,svg,webchannel,webengine,${PYTHON_USEDEP}] +
[gentoo-commits] repo/gentoo:master commit in: dev-python/sphinx-argparse/
commit: a702ddd3ec16b5f796945d07eea6bd7107c12844 Author: Alexey Shvetsov gentoo org> AuthorDate: Sun Jun 23 20:08:57 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Sun Jun 23 20:21:49 2024 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=a702ddd3 dev-python/sphinx-argparse: keyword 0.4.0 for ~riscv Signed-off-by: Alexey Shvetsov gentoo.org> dev-python/sphinx-argparse/sphinx-argparse-0.4.0.ebuild | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/dev-python/sphinx-argparse/sphinx-argparse-0.4.0.ebuild b/dev-python/sphinx-argparse/sphinx-argparse-0.4.0.ebuild index 9d28047739bb..ac81f626dd0b 100644 --- a/dev-python/sphinx-argparse/sphinx-argparse-0.4.0.ebuild +++ b/dev-python/sphinx-argparse/sphinx-argparse-0.4.0.ebuild @@ -16,7 +16,7 @@ HOMEPAGE=" LICENSE="MIT" SLOT="0" -KEYWORDS="amd64 ~arm64 x86" +KEYWORDS="amd64 ~arm64 ~riscv x86" RDEPEND=" dev-python/sphinx[${PYTHON_USEDEP}]
[gentoo-commits] repo/gentoo:master commit in: sci-libs/lmfit/
commit: 6a40d246a27d9ede2dc1b236515d956d4675633c Author: Alexey Shvetsov gentoo org> AuthorDate: Sun Jun 23 19:41:40 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Sun Jun 23 20:21:48 2024 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=6a40d246 sci-libs/lmfit: keyword 9.0-r1 for ~riscv Signed-off-by: Alexey Shvetsov gentoo.org> sci-libs/lmfit/lmfit-9.0-r1.ebuild | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/sci-libs/lmfit/lmfit-9.0-r1.ebuild b/sci-libs/lmfit/lmfit-9.0-r1.ebuild index 1c7f7fcdd3bf..32374742eb2f 100644 --- a/sci-libs/lmfit/lmfit-9.0-r1.ebuild +++ b/sci-libs/lmfit/lmfit-9.0-r1.ebuild @@ -1,4 +1,4 @@ -# Copyright 1999-2023 Gentoo Authors +# Copyright 1999-2024 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 EAPI=8 @@ -13,7 +13,7 @@ S="${WORKDIR}/${MY_P}" LICENSE="BSD-2" SLOT="0/9" -KEYWORDS="amd64 arm ~arm64 ~x86" +KEYWORDS="amd64 arm ~arm64 ~riscv ~x86" PATCHES=( "${FILESDIR}"/${P}-cmake.patch
[gentoo-commits] repo/gentoo:master commit in: media-gfx/mscgen/
commit: f5526c5d9eff6a18c5929e6cba9e0b76f72040a7 Author: Alexey Shvetsov gentoo org> AuthorDate: Sun Jun 23 20:06:40 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Sun Jun 23 20:21:48 2024 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=f5526c5d media-gfx/mscgen: keyword 0.20 for ~riscv Signed-off-by: Alexey Shvetsov gentoo.org> media-gfx/mscgen/mscgen-0.20.ebuild | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/media-gfx/mscgen/mscgen-0.20.ebuild b/media-gfx/mscgen/mscgen-0.20.ebuild index abd147c84d29..f39af35db010 100644 --- a/media-gfx/mscgen/mscgen-0.20.ebuild +++ b/media-gfx/mscgen/mscgen-0.20.ebuild @@ -9,7 +9,7 @@ DESCRIPTION="Message sequence chart generator" HOMEPAGE="https://www.mcternan.me.uk/mscgen/"; SRC_URI="https://www.mcternan.me.uk/${PN}/software/${PN}-src-${PV}.tar.gz"; -KEYWORDS="amd64 arm ~arm64 ppc ppc64 x86 ~x64-solaris" +KEYWORDS="amd64 arm ~arm64 ppc ppc64 ~riscv x86 ~x64-solaris" LICENSE="GPL-2+" SLOT="0"
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gromacs/
commit: 168182372978e77f85e4cea870bc905858e9dfe1 Author: Alexey Shvetsov gentoo org> AuthorDate: Sun Jun 23 20:10:45 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Sun Jun 23 20:21:50 2024 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=16818237 sci-chemistry/gromacs: Add ~riscv keyword Tested on visionfive2 Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/gromacs/gromacs-2024.1.ebuild| 2 +- sci-chemistry/gromacs/gromacs-2024.2.ebuild| 2 +- sci-chemistry/gromacs/gromacs-2024..ebuild | 2 +- sci-chemistry/gromacs/gromacs-.ebuild | 2 +- 4 files changed, 4 insertions(+), 4 deletions(-) diff --git a/sci-chemistry/gromacs/gromacs-2024.1.ebuild b/sci-chemistry/gromacs/gromacs-2024.1.ebuild index a3319899d419..33e343e23e7c 100644 --- a/sci-chemistry/gromacs/gromacs-2024.1.ebuild +++ b/sci-chemistry/gromacs/gromacs-2024.1.ebuild @@ -26,7 +26,7 @@ else doc? ( https://ftp.gromacs.org/manual/manual-${PV/_/-}.pdf ) test? ( https://ftp.gromacs.org/regressiontests/regressiontests-${PV/_/-}.tar.gz )" # since 2022 arm support was dropped (but not arm64) - KEYWORDS="~amd64 -arm ~arm64 ~x86 ~amd64-linux ~x86-linux ~x64-macos" + KEYWORDS="~amd64 -arm ~arm64 ~riscv ~x86 ~amd64-linux ~x86-linux ~x64-macos" fi ACCE_IUSE="cpu_flags_x86_sse2 cpu_flags_x86_sse4_1 cpu_flags_x86_fma4 cpu_flags_x86_avx cpu_flags_x86_avx2 cpu_flags_x86_avx512f cpu_flags_arm_neon" diff --git a/sci-chemistry/gromacs/gromacs-2024.2.ebuild b/sci-chemistry/gromacs/gromacs-2024.2.ebuild index a3319899d419..33e343e23e7c 100644 --- a/sci-chemistry/gromacs/gromacs-2024.2.ebuild +++ b/sci-chemistry/gromacs/gromacs-2024.2.ebuild @@ -26,7 +26,7 @@ else doc? ( https://ftp.gromacs.org/manual/manual-${PV/_/-}.pdf ) test? ( https://ftp.gromacs.org/regressiontests/regressiontests-${PV/_/-}.tar.gz )" # since 2022 arm support was dropped (but not arm64) - KEYWORDS="~amd64 -arm ~arm64 ~x86 ~amd64-linux ~x86-linux ~x64-macos" + KEYWORDS="~amd64 -arm ~arm64 ~riscv ~x86 ~amd64-linux ~x86-linux ~x64-macos" fi ACCE_IUSE="cpu_flags_x86_sse2 cpu_flags_x86_sse4_1 cpu_flags_x86_fma4 cpu_flags_x86_avx cpu_flags_x86_avx2 cpu_flags_x86_avx512f cpu_flags_arm_neon" diff --git a/sci-chemistry/gromacs/gromacs-2024..ebuild b/sci-chemistry/gromacs/gromacs-2024..ebuild index a3319899d419..33e343e23e7c 100644 --- a/sci-chemistry/gromacs/gromacs-2024..ebuild +++ b/sci-chemistry/gromacs/gromacs-2024..ebuild @@ -26,7 +26,7 @@ else doc? ( https://ftp.gromacs.org/manual/manual-${PV/_/-}.pdf ) test? ( https://ftp.gromacs.org/regressiontests/regressiontests-${PV/_/-}.tar.gz )" # since 2022 arm support was dropped (but not arm64) - KEYWORDS="~amd64 -arm ~arm64 ~x86 ~amd64-linux ~x86-linux ~x64-macos" + KEYWORDS="~amd64 -arm ~arm64 ~riscv ~x86 ~amd64-linux ~x86-linux ~x64-macos" fi ACCE_IUSE="cpu_flags_x86_sse2 cpu_flags_x86_sse4_1 cpu_flags_x86_fma4 cpu_flags_x86_avx cpu_flags_x86_avx2 cpu_flags_x86_avx512f cpu_flags_arm_neon" diff --git a/sci-chemistry/gromacs/gromacs-.ebuild b/sci-chemistry/gromacs/gromacs-.ebuild index a3319899d419..33e343e23e7c 100644 --- a/sci-chemistry/gromacs/gromacs-.ebuild +++ b/sci-chemistry/gromacs/gromacs-.ebuild @@ -26,7 +26,7 @@ else doc? ( https://ftp.gromacs.org/manual/manual-${PV/_/-}.pdf ) test? ( https://ftp.gromacs.org/regressiontests/regressiontests-${PV/_/-}.tar.gz )" # since 2022 arm support was dropped (but not arm64) - KEYWORDS="~amd64 -arm ~arm64 ~x86 ~amd64-linux ~x86-linux ~x64-macos" + KEYWORDS="~amd64 -arm ~arm64 ~riscv ~x86 ~amd64-linux ~x86-linux ~x64-macos" fi ACCE_IUSE="cpu_flags_x86_sse2 cpu_flags_x86_sse4_1 cpu_flags_x86_fma4 cpu_flags_x86_avx cpu_flags_x86_avx2 cpu_flags_x86_avx512f cpu_flags_arm_neon"
[gentoo-commits] repo/gentoo:master commit in: dev-python/sphinx-copybutton/
commit: bcffa3bba121ec9f9e1d2c1a4b9a0d3ee17dba0b Author: Alexey Shvetsov gentoo org> AuthorDate: Sun Jun 23 20:07:49 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Sun Jun 23 20:21:49 2024 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=bcffa3bb dev-python/sphinx-copybutton: keyword 0.5.2 for ~riscv Signed-off-by: Alexey Shvetsov gentoo.org> dev-python/sphinx-copybutton/sphinx-copybutton-0.5.2.ebuild | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/dev-python/sphinx-copybutton/sphinx-copybutton-0.5.2.ebuild b/dev-python/sphinx-copybutton/sphinx-copybutton-0.5.2.ebuild index 297c59d28f0d..95b715f89cb6 100644 --- a/dev-python/sphinx-copybutton/sphinx-copybutton-0.5.2.ebuild +++ b/dev-python/sphinx-copybutton/sphinx-copybutton-0.5.2.ebuild @@ -1,4 +1,4 @@ -# Copyright 2022-2023 Gentoo Authors +# Copyright 2022-2024 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 EAPI=8 @@ -13,7 +13,7 @@ HOMEPAGE="https://pypi.org/project/sphinx-copybutton/"; LICENSE="MIT" SLOT="0" -KEYWORDS="~amd64 ~arm64 ~x86" +KEYWORDS="~amd64 ~arm64 ~riscv ~x86" RDEPEND=" >=dev-python/sphinx-6.0[${PYTHON_USEDEP}]
[gentoo-commits] repo/gentoo:master commit in: dev-python/sphinx-inline-tabs/
commit: 042a001151864fa390436a9b8eb8e893b4b6444b Author: Alexey Shvetsov gentoo org> AuthorDate: Sun Jun 23 20:07:19 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Sun Jun 23 20:21:49 2024 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=042a0011 dev-python/sphinx-inline-tabs: keyword 2023.4.21 for ~riscv Signed-off-by: Alexey Shvetsov gentoo.org> dev-python/sphinx-inline-tabs/sphinx-inline-tabs-2023.4.21.ebuild | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/dev-python/sphinx-inline-tabs/sphinx-inline-tabs-2023.4.21.ebuild b/dev-python/sphinx-inline-tabs/sphinx-inline-tabs-2023.4.21.ebuild index ad6169c8bad4..26218e365229 100644 --- a/dev-python/sphinx-inline-tabs/sphinx-inline-tabs-2023.4.21.ebuild +++ b/dev-python/sphinx-inline-tabs/sphinx-inline-tabs-2023.4.21.ebuild @@ -1,4 +1,4 @@ -# Copyright 2022-2023 Gentoo Authors +# Copyright 2022-2024 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 EAPI=8 @@ -12,7 +12,7 @@ HOMEPAGE="https://pypi.org/project/sphinx-inline-tabs/"; LICENSE="MIT" SLOT="0" -KEYWORDS="~amd64 ~arm64 ~x86" +KEYWORDS="~amd64 ~arm64 ~riscv ~x86" RDEPEND=" >=dev-python/sphinx-6.0[${PYTHON_USEDEP}]
[gentoo-commits] repo/gentoo:master commit in: dev-python/sphinxcontrib-autoprogram/
commit: 786f381be1f235c54cc47512aef0b819a9306f12 Author: Alexey Shvetsov gentoo org> AuthorDate: Sun Jun 23 20:08:25 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Sun Jun 23 20:21:49 2024 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=786f381b dev-python/sphinxcontrib-autoprogram: keyword 0.1.9 for ~riscv Signed-off-by: Alexey Shvetsov gentoo.org> .../sphinxcontrib-autoprogram/sphinxcontrib-autoprogram-0.1.9.ebuild| 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/dev-python/sphinxcontrib-autoprogram/sphinxcontrib-autoprogram-0.1.9.ebuild b/dev-python/sphinxcontrib-autoprogram/sphinxcontrib-autoprogram-0.1.9.ebuild index 5109e7fb295d..e4fe91931b66 100644 --- a/dev-python/sphinxcontrib-autoprogram/sphinxcontrib-autoprogram-0.1.9.ebuild +++ b/dev-python/sphinxcontrib-autoprogram/sphinxcontrib-autoprogram-0.1.9.ebuild @@ -17,7 +17,7 @@ HOMEPAGE=" LICENSE="BSD-2" SLOT="0" -KEYWORDS="~amd64 ~arm64 ~x86" +KEYWORDS="~amd64 ~arm64 ~riscv ~x86" RDEPEND=" dev-python/sphinx[${PYTHON_USEDEP}]
[gentoo-commits] repo/gentoo:master commit in: x11-wm/xpra/, x11-wm/xpra/files/
commit: dcc3756596141e0080544618e18f1152bf0be774 Author: Paul Zander gmail com> AuthorDate: Tue Jun 4 17:58:47 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Mon Jun 10 19:18:21 2024 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=dcc37565 x11-wm/xpra: add 6.0.1, 6., update - Python 3.12 support - PEP517 support - re-enabled tests - general rework of the ebuild Closes: https://bugs.gentoo.org/912679 Closes: https://bugs.gentoo.org/929898 Signed-off-by: Paul Zander gmail.com> Closes: https://github.com/gentoo/gentoo/pull/37042 Signed-off-by: Alexey Shvetsov gentoo.org> x11-wm/xpra/Manifest | 1 + x11-wm/xpra/files/xpra--pep517.patch | 12 + x11-wm/xpra/metadata.xml | 4 + x11-wm/xpra/xpra-4.4.5-r2.ebuild | 7 +- x11-wm/xpra/xpra-4.4.6-r2.ebuild | 7 +- x11-wm/xpra/xpra-6.0.1.ebuild| 376 +++ x11-wm/xpra/xpra-6..ebuild | 376 +++ x11-wm/xpra/xpra-.ebuild | 296 ++-- 8 files changed, 999 insertions(+), 80 deletions(-) diff --git a/x11-wm/xpra/Manifest b/x11-wm/xpra/Manifest index b2881c697f2b..fb6136d149d3 100644 --- a/x11-wm/xpra/Manifest +++ b/x11-wm/xpra/Manifest @@ -1,2 +1,3 @@ DIST xpra-4.4.5.tar.gz 4332287 BLAKE2B 64165a18d0f204247f984f616438252e82922447441376e6e46a15509486e67f699e852562cd632591fd2831a86592d5029c5905932fc9d267b16a7e6edd1b5a SHA512 6fb28328efc020969fff17bf747a1e0bf5b21869c9532a8c482e12f979d1dec7989e10e5bf3a9ae7dbfaa9e48c670255b196fdb819200a74dfbdec3ba5ae744f DIST xpra-4.4.6.tar.gz 4334932 BLAKE2B 0518c6807be85777bb67b0a3283a610c06a97813671bff6edc701533aaa8f26b96e423e56ba56491ede120697277f6935ee26976b49550dfd2d52bbcd2daebd8 SHA512 273ee959647c1281f18c7b1b24d3a5179c4b6ce81515cc34618c698e55bdc2a8e94f0e236d7ab41c7bf29fa7fde0b1a2a1432445b80a75cd5a90f4858419 +DIST xpra-6.0.1.tar.gz 17214848 BLAKE2B 81a26cd9aa9a61241ba47bc6712cd225499a82a8743c4f5655f4529d525788789452daaa0894a2cb9292caa7fd9aa64f82ce5b347c9c168815198e18145629b9 SHA512 3520dec19bb6999fc19ffcd3c385545f4a61f7cf50d4d6930eb39dec1341c79f6c4c8c45d526f43b33ed78d5359524103fcf1608dc705b40e330a7eb53de2475 diff --git a/x11-wm/xpra/files/xpra--pep517.patch b/x11-wm/xpra/files/xpra--pep517.patch new file mode 100644 index ..48e355913b27 --- /dev/null +++ b/x11-wm/xpra/files/xpra--pep517.patch @@ -0,0 +1,12 @@ +diff --git a/pyproject.toml b/pyproject.toml +index 501829c18..842a2b962 100644 +--- a/pyproject.toml b/pyproject.toml +@@ -1,6 +1,7 @@ + [build-system] + requires = ["setuptools", "cython"] + build-backend = "setuptools.build_meta" ++backend-path = [ "" ] + + [project] + name = "xpra" diff --git a/x11-wm/xpra/metadata.xml b/x11-wm/xpra/metadata.xml index 2f4961963d03..9b78c23e894e 100644 --- a/x11-wm/xpra/metadata.xml +++ b/x11-wm/xpra/metadata.xml @@ -23,9 +23,13 @@ Enable clipboard support Enable csc softscaler support Install the HTML5 client + Enable the GTK3 client Use ibus input method via app-i18n/ibus + Enable Multicast DNS via dev-libs/mdns Enable OAuth2 authentication in the server + Enable H.264 support using media-libs/openh264 Use app-crypt/pinentry for password entry + Enable generating QRCodes for server URL via media-gfx/qrencode Enable system tray icon Build server-side code Enable vpx image format support diff --git a/x11-wm/xpra/xpra-4.4.5-r2.ebuild b/x11-wm/xpra/xpra-4.4.5-r2.ebuild index 64f6dfde2400..2069b11904d4 100644 --- a/x11-wm/xpra/xpra-4.4.5-r2.ebuild +++ b/x11-wm/xpra/xpra-4.4.5-r2.ebuild @@ -1,4 +1,4 @@ -# Copyright 1999-2023 Gentoo Authors +# Copyright 1999-2024 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 EAPI=8 @@ -11,18 +11,19 @@ else KEYWORDS="amd64 x86" fi -PYTHON_COMPAT=( python3_{9..11} ) +PYTHON_COMPAT=( python3_{10..11} ) DISTUTILS_SINGLE_IMPL=yes DISTUTILS_USE_SETUPTOOLS=no DISTUTILS_EXT=1 -inherit xdg xdg-utils distutils-r1 tmpfiles udev +inherit xdg distutils-r1 tmpfiles udev DESCRIPTION="X Persistent Remote Apps (xpra) and Partitioning WM (parti) based on wimpiggy" HOMEPAGE="https://xpra.org/"; LICENSE="GPL-2 BSD" SLOT="0" IUSE="brotli +client +clipboard crypt csc cups dbus doc ffmpeg jpeg html ibus +lz4 lzo minimal oauth opengl pinentry pulseaudio +server sound systemd test +trayicon udev vpx webcam webp xdg xinerama" +IUSE+=" +python_single_target_python3_11" REQUIRED_USE="${PYTHON_REQUIRED_USE} || ( client server ) diff --git a/x11-wm/xpra/xpra-4.4.6-r2.ebuild b/x11-wm/xpra/xpra-4.4.6-r2.ebuild index b4c34890cee3..9c4083c34137 100644 --- a/x11-wm/xpra/xpra-4.4.6-r2.ebuild +++ b/x1
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/MDAnalysis/
commit: 7efaff20543eff251c5493095db6febe5edb52e3 Author: Alexey Shvetsov gentoo org> AuthorDate: Wed Jun 5 17:22:41 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Wed Jun 5 17:22:41 2024 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=7efaff20 sci-chemistry/MDAnalysis: enable py3.12 Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/MDAnalysis/MDAnalysis-2.6.1.ebuild | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/sci-chemistry/MDAnalysis/MDAnalysis-2.6.1.ebuild b/sci-chemistry/MDAnalysis/MDAnalysis-2.6.1.ebuild index d407b705b2c5..f83ee1eabaf1 100644 --- a/sci-chemistry/MDAnalysis/MDAnalysis-2.6.1.ebuild +++ b/sci-chemistry/MDAnalysis/MDAnalysis-2.6.1.ebuild @@ -1,9 +1,9 @@ -# Copyright 1999-2023 Gentoo Authors +# Copyright 1999-2024 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 EAPI=8 -PYTHON_COMPAT=( python3_{9..11} ) +PYTHON_COMPAT=( python3_{10..12} ) DISTUTILS_USE_PEP517=setuptools PYPI_NO_NORMALIZE=1 @@ -12,9 +12,9 @@ inherit distutils-r1 pypi DESCRIPTION="A python library to analyze and manipulate molecular dynamics trajectories" HOMEPAGE="https://www.mdanalysis.org"; +LICENSE="GPL-2" SLOT="0" -LICENSE="GPL-2" KEYWORDS="~amd64 ~amd64-linux" # TODO: fix this
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/vmd/
commit: 435b1efde5f64e20abd52bfe53f3636c4088bce6 Author: Alexey Shvetsov gentoo org> AuthorDate: Wed Jun 5 17:27:32 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Wed Jun 5 17:27:32 2024 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=435b1efd sci-chemistry/vmd: enable py3.12 Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/vmd/vmd-1.9.4_alpha57.ebuild | 10 -- 1 file changed, 4 insertions(+), 6 deletions(-) diff --git a/sci-chemistry/vmd/vmd-1.9.4_alpha57.ebuild b/sci-chemistry/vmd/vmd-1.9.4_alpha57.ebuild index af9f38835c45..e0628f111574 100644 --- a/sci-chemistry/vmd/vmd-1.9.4_alpha57.ebuild +++ b/sci-chemistry/vmd/vmd-1.9.4_alpha57.ebuild @@ -1,8 +1,8 @@ -# Copyright 1999-2023 Gentoo Authors +# Copyright 1999-2024 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 EAPI=8 -PYTHON_COMPAT=( python3_{9..11} ) +PYTHON_COMPAT=( python3_{10..12} ) inherit cuda desktop prefix python-single-r1 toolchain-funcs xdg @@ -15,9 +15,10 @@ SRC_URI=" ${MY_P}.src.tar.gz fetch+https://dev.gentoo.org/~pacho/${PN}/${PN}-1.9.4_alpha57-gentoo-patches.tar.xz " +S="${WORKDIR}/${MY_P}" +LICENSE="vmd" SLOT="0" -LICENSE="vmd" KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" IUSE="cuda gromacs msms povray sqlite tachyon xinerama" @@ -57,9 +58,6 @@ RDEPEND="${CDEPEND} msms? ( sci-chemistry/msms-bin ) povray? ( media-gfx/povray ) " - -S="${WORKDIR}/${MY_P}" - VMD_DOWNLOAD="http://www.ks.uiuc.edu/Development/Download/download.cgi?PackageName=VMD"; # Binary only plugin
[gentoo-commits] repo/gentoo:master commit in: sci-biology/biopython/
commit: bf920df09e1d30717925a72a5ada7a10557b2105 Author: Alexey Shvetsov gentoo org> AuthorDate: Wed Jun 5 17:22:07 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Wed Jun 5 17:22:07 2024 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=bf920df0 sci-biology/biopython: enable py3.12 Signed-off-by: Alexey Shvetsov gentoo.org> sci-biology/biopython/biopython-1.81-r1.ebuild | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/sci-biology/biopython/biopython-1.81-r1.ebuild b/sci-biology/biopython/biopython-1.81-r1.ebuild index f4fd86ba3ffb..96d83b74b492 100644 --- a/sci-biology/biopython/biopython-1.81-r1.ebuild +++ b/sci-biology/biopython/biopython-1.81-r1.ebuild @@ -3,7 +3,7 @@ EAPI=8 -PYTHON_COMPAT=( python3_{9..11} ) +PYTHON_COMPAT=( python3_{10..12} ) DISTUTILS_USE_PEP517="setuptools" DISTUTILS_EXT=1
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/pymol/
commit: dfe0f62750dadf6273bd4146db194c7165181781 Author: Alexey Shvetsov gentoo org> AuthorDate: Fri May 17 19:20:35 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Fri May 17 19:20:35 2024 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=dfe0f627 sci-chemistry/pymol: Update to 3.0.0 and drop old Closes: https://bugs.gentoo.org/862441 Closes: https://bugs.gentoo.org/910511 Closes: https://bugs.gentoo.org/929762 Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/pymol/Manifest | 2 +- sci-chemistry/pymol/pymol-2.5.0-r3.ebuild | 100 - .../{pymol-2.5.0-r5.ebuild => pymol-3.0.0.ebuild} | 9 +- 3 files changed, 6 insertions(+), 105 deletions(-) diff --git a/sci-chemistry/pymol/Manifest b/sci-chemistry/pymol/Manifest index 2c6723b71c25..2ef25b2b27fa 100644 --- a/sci-chemistry/pymol/Manifest +++ b/sci-chemistry/pymol/Manifest @@ -1,2 +1,2 @@ DIST pymol-1.8.4.0.png.xz 19528 BLAKE2B f3d23d4cedca3d8bb96b20646a548da4be570697e3346a11b01c5c3599b536ba4697be08472dfa8a4f6533167defc1a37a1de332931a73857319cb28fd42cd2b SHA512 40bb0d3f226476f6e047b5361956aad955232a97641474765eaa5204f0539aee3810e0266213618a45364f9f31f6eb18380b17e0c79f64065f7b62a9016caa7c -DIST pymol-2.5.0.tar.gz 10470268 BLAKE2B ad3721432001053be93afe755f531ae47348213b042e84dae33cd79580428c9ac3d00629afa0222e4081807dc80e2dd69c3963a457666b5975b6263b988d02d9 SHA512 19f21b8f735fda5314abf202d56f3c81c7251bf6ef0df73ccee534d9c08035f4ef6155ffb68e09d7717a0fb5ba7289bbfa440691bea4cec0de7199c9e858ea91 +DIST pymol-3.0.0.tar.gz 29510174 BLAKE2B b67818e408045e386e44a203f29cd94a0ce34ec706776d29f78f1720bdc5c79d88f3b3e178882295b5a636d97fe70ff49eb1b021a9a6b96f0f4216bc392219d1 SHA512 eab05a46220339a05d8d4facdce6bfa08c6fc8a858a7b228236ef6c4054207059ef0f53a26bedebe4084a74b510015937fb4477f99612b21412cd75bf0c376a2 diff --git a/sci-chemistry/pymol/pymol-2.5.0-r3.ebuild b/sci-chemistry/pymol/pymol-2.5.0-r3.ebuild deleted file mode 100644 index 317350640580.. --- a/sci-chemistry/pymol/pymol-2.5.0-r3.ebuild +++ /dev/null @@ -1,100 +0,0 @@ -# Copyright 1999-2024 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=8 - -PYTHON_COMPAT=( python3_{9..11} ) -DISTUTILS_USE_SETUPTOOLS=no -DISTUTILS_EXT=1 - -inherit desktop flag-o-matic xdg distutils-r1 - -DESCRIPTION="A Python-extensible molecular graphics system" -HOMEPAGE="https://www.pymol.org/"; -SRC_URI=" - https://dev.gentoo.org/~pacho/${PN}/${PN}-1.8.4.0.png.xz - https://github.com/schrodinger/pymol-open-source/archive/v${PV}.tar.gz -> ${P}.tar.gz - " -LICENSE="BitstreamVera BSD freedist HPND OFL-1.0 public-domain UoI-NCSA" #844991 -SLOT="0" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos" -IUSE="+netcdf web" - -DEPEND=" - dev-cpp/msgpack-cxx - dev-libs/mmtf-cpp - dev-python/pyopengl[${PYTHON_USEDEP}] - dev-python/PyQt5[opengl,${PYTHON_USEDEP}] - dev-python/numpy[${PYTHON_USEDEP}] - dev-python/pmw[${PYTHON_USEDEP}] - media-libs/freetype:2 - media-libs/glew:0= - media-libs/glm - media-libs/libpng:0= - media-video/mpeg-tools - sys-libs/zlib - netcdf? ( sci-libs/netcdf:0= ) -" -RDEPEND="${DEPEND} - sci-chemistry/chemical-mime-data -" - -S="${WORKDIR}"/${PN}-open-source-${PV} - -python_prepare_all() { - sed \ - -e "s:\"/usr:\"${EPREFIX}/usr:g" \ - -e "/ext_comp_args.*+=/s:\[.*\]$:\[\]:g" \ - -i setup.py || die - - sed \ - -e "s:/opt/local:${EPREFIX}/usr:g" \ - -e '/ext_comp_args/s:\[.*\]:[]:g' \ - -i setup.py || die - sed \ - -e "s:\['msgpackc'\]:\['msgpack'\]:g" \ - -i setup.py || die - - append-cxxflags -std=c++0x - - distutils-r1_python_prepare_all -} - -python_configure_all() { - use !netcdf && DISTUTILS_ARGS=( --no-vmd-plugins ) -} - -python_install() { - distutils-r1_python_install \ - --pymol-path="${EPREFIX}/usr/share/pymol" - - sed \ - -e '1i#!/usr/bin/env python' \ - "${D}/$(python_get_sitedir)"/pymol/__init__.py > "${T}"/${PN} || die - python_doscript "${T}"/${PN} -} - -python_install_all() { - distutils-r1_python_install_all - - # These environment variables should not go in the wrapper script, or else - # it will be impossible to use the PyMOL libraries from Python. - cat >> "${T}"/20pymol <<- EOF || die - PYMOL_PATH="${EPREFIX}/usr/share/pymol" - PYMOL_DATA="${EPREFIX}/usr/s
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gromacs/
commit: 1fd789f0a0a98b5048aeab92667a374e5c420fb6 Author: Alexey Shvetsov gentoo org> AuthorDate: Fri May 17 06:56:22 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Fri May 17 06:57:05 2024 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=1fd789f0 sci-chemistry/gromacs: add 2024.2 Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/gromacs/Manifest | 3 + sci-chemistry/gromacs/gromacs-2024.2.ebuild | 335 2 files changed, 338 insertions(+) diff --git a/sci-chemistry/gromacs/Manifest b/sci-chemistry/gromacs/Manifest index e49864e592ec..ded1c93522be 100644 --- a/sci-chemistry/gromacs/Manifest +++ b/sci-chemistry/gromacs/Manifest @@ -3,16 +3,19 @@ DIST gromacs-2021.7.tar.gz 38028032 BLAKE2B 2dc1b15ca8692ca5cf4ad1c7a266b9e2ced0 DIST gromacs-2022.6.tar.gz 40330705 BLAKE2B fdafbd5b2a92d6022dec3e79e961fef220f1eba42850916e7cb70ef459a8d9c6ebc8c1bbe3c105f5b23161dd5c552ec00505d7c0036649b782cf52c311498743 SHA512 91217394f534ca8f78f73189059712e1c2cd354b658722f23768b12748f7bfaf1a5e95227c5ed1b69c1a9b72c3174e9600a712c157ea2f27156387efb823dd67 DIST gromacs-2023.4.tar.gz 42044149 BLAKE2B 2c13a04ddbfc167a7887d44bb6fdacde4ece4e8cf2ba920f453fc6150423c3cae39cd1afe0eebb52b9fbc72fe37fee527c83227a0f3fe21b289655b5c1cd29c5 SHA512 7913348d0da25e095b795123894f4e2007f66cf2455664edeb7bc1edc09f2e0da9911bc9501e3001278ab59917ccef838c485e6b6533c1c816c54c6dbd56350c DIST gromacs-2024.1.tar.gz 42324773 BLAKE2B 6600c802c39bf7c36d8e388ced202504dcceb3ec018d5f48af4f55e43dd170157a9b6335ce1b20a73623d05a391787936c2ab6ee48ab031d17078256eb7153c5 SHA512 fea88fac28ec142201eec1cea984eabd9db43346254ac555954a13fdbae5a5b00281a17efc8dba8ab0ac42794e3cce41b314c5cb36fb4292a1c6d2668b2ba192 +DIST gromacs-2024.2.tar.gz 42367929 BLAKE2B 3ffdbc075c3b92d1200376b45b0599eafc15454830f0a5b1c1e250a50d8fcd16a6a904c5f04979328b1afc89e6c77b15df44d9c240425507bafe0689107bf9a0 SHA512 aa6c0ae3849d6e58ae43ffef6ef90d06f62e53ab70047c643c90e9f3ac7305c2d52bb5c9da02b174a6244e8a6adfb6d205d1c9d22312709a1b358923f5d10741 DIST gromacs-2024.tar.gz 42455653 BLAKE2B 86446c5e95f9ddaf718126c409389730ee1642f36c3e0d844eb4b3a640c275e7979581365dacb57ac66daec296bbd94be6d5c0376f7255d3d3950f6759f8d69a SHA512 d64bf3cbe579003ce37dfd3d27c68746a04360d9d5491c638f3f2bd9af2c938504b0c9710c62e85225370ddf5418e6ebc2422033e46af5eee6e4aaa53699fed7 DIST manual-2020.7.pdf 11850780 BLAKE2B 38594e87993badfbbcf47d6010a7f67d3c3426dab85e1462916b4d62be27b5764953f912cf2b71ee24877e0bfa27b3f74431da2da81b4977d58cb66b2cc795a3 SHA512 4f184f2c90e0bac01a48069cc546cd5b04fa5f543f90dd2d68c6d17be278152fd09456b6a6c5c8236f8fb85a174d6ec7a1c7b44d437b4e6fea5d0ada73cec0f6 DIST manual-2021.7.pdf 12256526 BLAKE2B 6f298d7dac142f66914bbc2ea7d6ca70c4aeafaf33ccf12336d5cec64b1f1097b5332c767bb411ccef706ec6184479a84bcf59bda21c4249d45d8ce3dea08e79 SHA512 197765accb8ab6c5f1cc94b2697ff1817e157d85fa231dfe36a85036076e04da2a8035de66aba4f46c6dd7f553176357b94c92e1da5d1dabc574c627deee5279 DIST manual-2022.6.pdf 13081140 BLAKE2B e7ae3f23ddc076c295be2c464fe2177d6d6848d070ee5eba2b572e996ae08adead898ec6432b123802907f64983aa4d2e17426be8d540c48d12398a479519f9e SHA512 4724888b3c33c4fa4a035d5fb2f8c51496f67e1ee312676510d5ba74bc3cc1571e71e84464585b87ad0133e8e736343ae382bf8f7b556633f86a99560213d271 DIST manual-2023.4.pdf 13572503 BLAKE2B f9985c6ceed2dd66d49c9e9817651b0250994aacb571a552dde6b82a7c02471409cc34622d216290e8ceb3934cf4f51d98d95e1c1f584d1deb5e64c3e02c4b04 SHA512 b42e53f405a8ff4387970e4a1a199452bcb11befbf492cbd78b81229db2b0991e5c0c549162937e83eec79b15c71b441474b1338ed9050fdd132ae2ba09175b6 DIST manual-2024.1.pdf 13651959 BLAKE2B d76e112d3d22e6638e733dec7db713aa65e16099e98935e0bfe8842966a51a04ca370e9afb62ad5b30f3adced1c67574a21445b61f3ce5a753e5d8680f87967e SHA512 3f1aa3433095983cf7ce5c54383bc384d25d9f3b22357e0360639f619c740df37ec0c827ccc9d48b8f93e3877315ee82f740c486b231f777e1be35e44fd823fe +DIST manual-2024.2.pdf 13664758 BLAKE2B 05138a16f4173d4b9a2c855ebccb021ca52d6d556f93a4d1536aaa687edcfd887c20a86a36cbafc245566e6de3bf4a940d082fe1d88bbab16df9d7d6e59fa8a0 SHA512 1c5691cbbd416142ed92124d543c8a60afbef78d82b303aec773f0a930c22f97f492250610090e42497bacdff5cb007ccdc18e62f98e3d8c63359d2c7810624c DIST manual-2024.pdf 13644437 BLAKE2B 19d547686d5c5be5e1236aba648e8afb174b281802ab76e020466953ab5d2dd98701f21eb4736cb449b61960b5b7aadce6711b2b0309a41dd1997d7383bce09e SHA512 b00048651f1f81f9024ba5c4c02ad66d2b07eb7b816f0489568fb64859cac515b885a5cb4640c8b5bd7c3620655a7ebc5fc2e4e4cbb8e952ffb0c9b5815ae661 DIST regressiontests-2020.7.tar.gz 48541487 BLAKE2B 255608b52158c6c01e7c7c4dcf075128ecf22b2f26d32e8c203de8a4bc69c60ec95f49cf8ccd64abc3073c5e8dca9d6b01daed9dfb8f67bce2dd068ed01acd05 SHA512 2458582f94f3c9f4e1454824ce3940b4f5b6cb2151d06846c42e7a9448296fd2a6df4f53be9624e0d3317d2b59f89bb5348eb8b2970d7b46ac22ca989ef3458a DIST regressiontests-2021.7.tar.gz 4853750
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/modeller/files/, sci-chemistry/modeller/
commit: 32e720fc4ab6c8c11c86f1518cad6b0cb77d4dbf Author: Alexey Shvetsov gentoo org> AuthorDate: Fri May 17 06:54:45 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Fri May 17 06:57:05 2024 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=32e720fc sci-chemistry/modeller: add 10.5, drop 9.25 Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/modeller/Manifest| 2 +- .../modeller/files/modeller-10.5-fix-except.patch | 29 ++ .../{modeller-9.25.ebuild => modeller-10.5.ebuild} | 15 ++- 3 files changed, 37 insertions(+), 9 deletions(-) diff --git a/sci-chemistry/modeller/Manifest b/sci-chemistry/modeller/Manifest index e3d097b4b75d..7f12b0817212 100644 --- a/sci-chemistry/modeller/Manifest +++ b/sci-chemistry/modeller/Manifest @@ -1 +1 @@ -DIST modeller-9.25.tar.gz 44820658 BLAKE2B b3e8a3cc8cc70689a25bc5ed2eee294d67bef8eea9ed4b64d41aba3a27c0bc428ae58e74d734da0eaab7e4fabb213d098b9ba66b9569557159ac7d4a58244b0a SHA512 93f273aba0ec0f884cde5bbcc24769a09386bfc6bf1744d80001e41924b1a682225ba3c554fb9898ef3bfd1fd8451f9458bb92431b20f2f51b01781e79686c91 +DIST modeller-10.5.tar.gz 38272541 BLAKE2B 9c71a9f1e4c34c91852db73ebf86f71cf355217d6889566ff6840dc6874d4906b989a36f3dd642ba4e4d1fe671c1a15753a33e7fabb53adc9182c76fe4fdb6c4 SHA512 666c5367a14084438c96b68ba0779ebd97ca831a4a6538f66e54b63657c8e13b85931c2de8300311f1df7d02907b2ec61f27f95b0704f2c6a313b6baee56febc diff --git a/sci-chemistry/modeller/files/modeller-10.5-fix-except.patch b/sci-chemistry/modeller/files/modeller-10.5-fix-except.patch new file mode 100644 index ..f480a8229bf9 --- /dev/null +++ b/sci-chemistry/modeller/files/modeller-10.5-fix-except.patch @@ -0,0 +1,29 @@ +--- a/modlib/modeller/top_interpreter/__init__.py 2024-03-27 15:52:04.005550025 +0300 b/modlib/modeller/top_interpreter/__init__.py 2024-03-27 15:54:00.776897686 +0300 +@@ -65,7 +65,7 @@ + if len(line) > 0: + try: + self._parse_top_ini_line(line.split(None, 4), vars) +-except TypeError, detail: # noqa: E999 ++except (TypeError, detail): # noqa: E999 + mod_log_write("read_top__E> " + str(detail)) + mod_log_write(" top.ini line: " + line) + raise +@@ -115,7 +115,7 @@ + try: + fh = self._open_include_file( + self.variables['include_file']) +-except IOError, detail: ++except (IOError, detail): + mod_log_write("runlines__E> " + str(detail)) + mod_log_write(" TOP Command line: " + line) + raise +@@ -162,7 +162,7 @@ + indxca = self._run_top_cmd(cmd, indxca, lines, callstack, +subrout) + _modeller.mod_top_post() +-except (IndexError, SyntaxError, TypeError), detail: ++except (IndexError, SyntaxError, TypeError, detail): + mod_log_write("runlines__E> " + str(detail)) + mod_log_write(" TOP Command line: " + line) + raise diff --git a/sci-chemistry/modeller/modeller-9.25.ebuild b/sci-chemistry/modeller/modeller-10.5.ebuild similarity index 93% rename from sci-chemistry/modeller/modeller-9.25.ebuild rename to sci-chemistry/modeller/modeller-10.5.ebuild index 1401279be237..80718ec876c8 100644 --- a/sci-chemistry/modeller/modeller-9.25.ebuild +++ b/sci-chemistry/modeller/modeller-10.5.ebuild @@ -1,10 +1,11 @@ -# Copyright 1999-2023 Gentoo Authors +# Copyright 1999-2024 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 EAPI=7 -PYTHON_COMPAT=( python3_{9..10} ) -DISTUTILS_USE_SETUPTOOLS=no +PYTHON_COMPAT=( python3_{10..12} ) +DISTUTILS_USE_PEP517=setuptools +DISTUTILS_EXT=1 inherit distutils-r1 @@ -13,14 +14,15 @@ HOMEPAGE="https://salilab.org/modeller/"; SRC_URI="https://salilab.org/${PN}/${PV}/${P}.tar.gz"; LICENSE="modeller" +SLOT="0" KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" IUSE="doc examples" -SLOT="0" RESTRICT="mirror" DEPEND=">=dev-lang/swig-1.3" -RDEPEND="" + +PATCHES=( "${FILESDIR}/${P}-fix-except.patch" ) INPATH="${EPREFIX}"/opt/modeller${ver} @@ -40,8 +42,6 @@ pkg_setup() { python_prepare_all() { sed "s:i386-intel8:${EXECTYPE}:g" -i src/swig/setup.py || die rm -rf modlib/modeller/python_library || die - sed -i '1 i\#!/usr/bin/python' bin/modslave.py || die - 2to3 -w -n modlib/modeller || die distutils-r1_python_prepare_all } @@ -77,7 +77,
[gentoo-commits] repo/gentoo:master commit in: dev-python/pmw/
commit: 79d4d97f2d8d6299bec282110448c078af577050 Author: Alexey Shvetsov gentoo org> AuthorDate: Wed Mar 27 12:23:48 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Wed Mar 27 12:24:58 2024 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=79d4d97f dev-python/pmw: add 2.1.1 Closes: https://bugs.gentoo.org/905446 Signed-off-by: Alexey Shvetsov gentoo.org> dev-python/pmw/Manifest | 1 + dev-python/pmw/pmw-2.1.1.ebuild | 43 + 2 files changed, 44 insertions(+) diff --git a/dev-python/pmw/Manifest b/dev-python/pmw/Manifest index 42cbe402c60e..db7c6f3cc171 100644 --- a/dev-python/pmw/Manifest +++ b/dev-python/pmw/Manifest @@ -1 +1,2 @@ DIST Pmw-2.0.1.tar.gz 830448 BLAKE2B c78fef1570a34b9784f936f16856c4450164d8a232770e59cc084c1113888af8ee002cd1c7ddeadcddaacb5eae9ff58fcbfc270fc066875523e31a9d26770cd3 SHA512 99654e961aa40a64eebc08fe473e94da0ce431e6465255c68c251dfd544a51edef1a5d97dfd89ce756eb5f7fcf917dbef27f646ba9451ab72f3d460daa09a556 +DIST Pmw-2.1.1.tar.gz 1077119 BLAKE2B 3e78796489d996df8fbcaca119f03b718f5457d38af175232c055c1c94e6c98c3f198e3dd0859a4af1cc88f36df83ed57c0d8ee67f90362a8590de5a37d2f669 SHA512 7f4c3181b0ae546f9f89cf666917fd9ea0161a2c4a4e6b5756e0aeb543fcd3ed4598c83e294b04312fea6a386b06b370668b4400f1497cc8b2fc2ab19a3fdd3d diff --git a/dev-python/pmw/pmw-2.1.1.ebuild b/dev-python/pmw/pmw-2.1.1.ebuild new file mode 100644 index ..b9c3e6317b8c --- /dev/null +++ b/dev-python/pmw/pmw-2.1.1.ebuild @@ -0,0 +1,43 @@ +# Copyright 1999-2024 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +DISTUTILS_USE_PEP517=setuptools +PYPI_NO_NORMALIZE=1 +PYPI_PN=${PN^} +PYTHON_COMPAT=( python3_{10..12} ) +PYTHON_REQ_USE="tk" + +inherit distutils-r1 virtualx pypi + +DESCRIPTION="Toolkit for building high-level compound Python widgets using the Tkinter module" +HOMEPAGE="https://pypi.org/project/Pmw/"; + +LICENSE="BSD" +SLOT="py3" +KEYWORDS="~alpha ~amd64 ~ia64 ~ppc ~sparc ~x86 ~amd64-linux ~x86-linux ~x64-macos" +IUSE="doc test" +# https://sourceforge.net/p/pmw/bugs/39/ +RESTRICT="test" + +DEPEND="!dev-python/pmw:0" +RDEPEND="${DEPEND}" + +python_test() { + VIRTUALX_COMMAND="${PYTHON}" + cd "${BUILD_DIR}/lib/Pmw/Pmw_${PV//./_}/" || die + cp tests/{flagup.bmp,earthris.gif} . || die + for test in tests/*_test.py; do + echo "running test "$test + PYTHONPATH=tests:../../ virtx emake -j1 $test || die + done +} + +python_install_all() { + local DIR="Pmw/Pmw_${PV//./_}" + + use doc && HTML_DOCS=( "${DIR}"/doc/. ) + + distutils-r1_python_install_all +}
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/autodock_vina/
commit: e946f4c6951ed2ea86b806b3bef37b8c5ba7af01 Author: Alexey Shvetsov gentoo org> AuthorDate: Tue Mar 5 10:57:33 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Tue Mar 26 10:53:17 2024 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=e946f4c6 sci-chemistry/autodock_vina: add github upstream metadata Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/autodock_vina/metadata.xml | 3 +++ 1 file changed, 3 insertions(+) diff --git a/sci-chemistry/autodock_vina/metadata.xml b/sci-chemistry/autodock_vina/metadata.xml index f29cb87a5701..ec0a09453889 100644 --- a/sci-chemistry/autodock_vina/metadata.xml +++ b/sci-chemistry/autodock_vina/metadata.xml @@ -17,4 +17,7 @@ multithreading Journal of Computational Chemistry 31 (2010) 455-461 + + ccsb-scripps/AutoDock-Vina +
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/autodock_vina/files/, sci-chemistry/autodock_vina/
commit: c2eae57dd0815a47e8c59e0c6dbcda1eea67f949 Author: Alexey Shvetsov gentoo org> AuthorDate: Tue Mar 5 10:56:54 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Tue Mar 26 10:53:06 2024 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=c2eae57d sci-chemistry/autodock_vina: add 1.2.5 Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/autodock_vina/Manifest | 1 + .../autodock_vina/autodock_vina-1.2.5.ebuild | 50 + .../files/autodock_vina-1.2.5-gentoo.patch | 64 ++ 3 files changed, 115 insertions(+) diff --git a/sci-chemistry/autodock_vina/Manifest b/sci-chemistry/autodock_vina/Manifest index 67f2032d2856..e4088c449178 100644 --- a/sci-chemistry/autodock_vina/Manifest +++ b/sci-chemistry/autodock_vina/Manifest @@ -1 +1,2 @@ +DIST autodock_vina-1.2.5.tar.gz 24158966 BLAKE2B c11493fcb35d409b97f639c4da48967d5df450781d412d80a951b95162555f4b1dfba809a01062136a7f0664c0b9a01a42b5403ee1d278a57afd669cf1f96321 SHA512 d36908e5833d22bcbc4dae353ef32b905d6eb46511302f7583a291398bfadff5e75fc99ce7b380860578b2257e5c32434cc75b1ca51fafb4b5f12d9477a878e9 DIST autodock_vina_1_1_2.tgz 67366 BLAKE2B dc754bf522795ebfbfcf89a2df4e3761d941c1f0ce05cf56898720c1e855f5dd00fd2a583f5a8d218fa2e738d37e014a9b3239b9aa989b9018a6a33f8f0bd02c SHA512 f704af322ebc192117c49d0cf8a3f217105beccb7b47d6361665470894ef7a9f91fc4b5f07cc9aff56e497bfa80953e40e39090c8394a095c61597756e333ae9 diff --git a/sci-chemistry/autodock_vina/autodock_vina-1.2.5.ebuild b/sci-chemistry/autodock_vina/autodock_vina-1.2.5.ebuild new file mode 100644 index ..e9edf1f9c991 --- /dev/null +++ b/sci-chemistry/autodock_vina/autodock_vina-1.2.5.ebuild @@ -0,0 +1,50 @@ +# Copyright 1999-2024 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=7 + +inherit flag-o-matic toolchain-funcs + +MY_PN=AutoDock-Vina + +DESCRIPTION="Program for drug discovery, molecular docking and virtual screening" +HOMEPAGE="http://vina.scripps.edu/"; +SRC_URI="https://github.com/ccsb-scripps/AutoDock-Vina/archive/refs/tags/v${PV}.tar.gz -> ${P}.tar.gz" + +S="${WORKDIR}/${MY_PN}-${PV}/build/linux/release" + +LICENSE="Apache-2.0" +SLOT="0" +KEYWORDS="~amd64 ~x86" +IUSE="debug" + +RDEPEND="dev-libs/boost:=" +DEPEND="${RDEPEND}" + +PATCHES=( + "${FILESDIR}"/${P}-gentoo.patch +) + +src_prepare() { + cd "${WORKDIR}/${MY_PN}-${PV}" || die + pwd + sed -e "s:VERSION:\"${PV}\":g" \ + -i src/main/main.cpp \ + -i src/split/split.cpp || die + default +} + +src_configure() { + append-cxxflags -DBOOST_FILESYSTEM_VERSION=3 -DBOOST_TIMER_ENABLE_DEPRECATED -std=c++14 +} + +src_compile() { + emake \ + BASE="${EPREFIX}"/usr/ \ + GPP="$(tc-getCXX)" \ + C_OPTIONS=$(usex debug '' -DNDEBUG) +} + +src_install() { + dobin vina{,_split} +} diff --git a/sci-chemistry/autodock_vina/files/autodock_vina-1.2.5-gentoo.patch b/sci-chemistry/autodock_vina/files/autodock_vina-1.2.5-gentoo.patch new file mode 100644 index ..e7bf1d5007ff --- /dev/null +++ b/sci-chemistry/autodock_vina/files/autodock_vina-1.2.5-gentoo.patch @@ -0,0 +1,64 @@ +diff -urN AutoDock-Vina-1.2.5.orig/build/linux/debug/Makefile AutoDock-Vina-1.2.5/build/linux/debug/Makefile +--- AutoDock-Vina-1.2.5.orig/build/linux/debug/Makefile2024-03-05 13:23:49.210511903 +0300 AutoDock-Vina-1.2.5/build/linux/debug/Makefile 2024-03-05 13:25:34.028499976 +0300 +@@ -1,7 +1,7 @@ + BASE=/usr + BOOST_VERSION= + BOOST_INCLUDE = $(BASE)/include +-C_PLATFORM=-static -pthread ++C_PLATFORM=-pthread + GPP=g++ + C_OPTIONS= -g -std=gnu++11 + BOOST_LIB_VERSION= +diff -urN AutoDock-Vina-1.2.5.orig/build/linux/release/Makefile AutoDock-Vina-1.2.5/build/linux/release/Makefile +--- AutoDock-Vina-1.2.5.orig/build/linux/release/Makefile 2024-03-05 13:23:49.213845279 +0300 AutoDock-Vina-1.2.5/build/linux/release/Makefile 2024-03-05 13:26:10.285621339 +0300 +@@ -1,7 +1,7 @@ + BASE=/usr/local + BOOST_VERSION= + BOOST_INCLUDE = $(BASE)/include +-C_PLATFORM=-static -pthread ++C_PLATFORM=-pthread + GPP=g++ + C_OPTIONS= -O3 -DNDEBUG -std=c++11 + BOOST_LIB_VERSION= +diff -urN AutoDock-Vina-1.2.5.orig/build/makefile_common AutoDock-Vina-1.2.5/build/makefile_common +--- AutoDock-Vina-1.2.5.orig/build/makefile_common 2024-03-05 13:23:49.213845279 +0300 AutoDock-Vina-1.2.5/build/makefile_common 2024-03-05 13:28:30.557370911 +0300 +@@ -14,7 +14,7 @@ + #CC = ${GPP} ${C_PLATFORM} -ansi -pedantic -Wno-long-long ${C_OPTIONS} $(INCFLAGS) + CC = ${GPP} ${C_PLATFORM} -ansi -Wno-long-long ${C_OPTIONS} $(INCFLAGS) + +-LDFLAGS = -L$(BASE)/lib -L. ++LDFLAGS = -L. + + # test if bo
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/autodock_vina/
commit: 8ff06565cfa9e2d6114008541f2fae2c23f9e12c Author: Alexey Shvetsov gentoo org> AuthorDate: Sat Mar 2 21:14:38 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Sat Mar 2 21:14:38 2024 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=8ff06565 sci-chemistry/autodock_vina: Fix build with recent boost Closes: https://bugs.gentoo.org/913037 Closes: https://bugs.gentoo.org/924622 Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/autodock_vina/autodock_vina-1.1.2-r1.ebuild | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/sci-chemistry/autodock_vina/autodock_vina-1.1.2-r1.ebuild b/sci-chemistry/autodock_vina/autodock_vina-1.1.2-r1.ebuild index a6495591339a..63810da09284 100644 --- a/sci-chemistry/autodock_vina/autodock_vina-1.1.2-r1.ebuild +++ b/sci-chemistry/autodock_vina/autodock_vina-1.1.2-r1.ebuild @@ -1,4 +1,4 @@ -# Copyright 1999-2023 Gentoo Authors +# Copyright 1999-2024 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 EAPI=7 @@ -33,7 +33,7 @@ src_prepare() { } src_configure() { - append-cxxflags -DBOOST_FILESYSTEM_VERSION=3 -std=c++11 + append-cxxflags -DBOOST_FILESYSTEM_VERSION=3 -DBOOST_TIMER_ENABLE_DEPRECATED -std=c++14 } src_compile() {
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gromacs/
commit: 6c2b695c5b63e8e097173bda873a4b2e649ecbde Author: Alexey Shvetsov gentoo org> AuthorDate: Thu Feb 29 19:56:43 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Thu Feb 29 19:56:43 2024 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=6c2b695c sci-chemistry/gromacs: add 2023.4, drop 2023.3 Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/gromacs/Manifest | 6 +++--- .../gromacs/{gromacs-2023.3.ebuild => gromacs-2023.4.ebuild}| 0 2 files changed, 3 insertions(+), 3 deletions(-) diff --git a/sci-chemistry/gromacs/Manifest b/sci-chemistry/gromacs/Manifest index 6a6d847781b0..fc5ddbd370bd 100644 --- a/sci-chemistry/gromacs/Manifest +++ b/sci-chemistry/gromacs/Manifest @@ -3,7 +3,7 @@ DIST gromacs-2019.6.tar.gz 33446147 BLAKE2B adc21fb6b841b06d499607f8c0166a673645 DIST gromacs-2020.7.tar.gz 29175554 BLAKE2B 98f1aa415946f8eb113febc81105f0c1b0919b96fc3c55a0ab83bf3950ff509b81eade92e645adb0bc2b407df239e20cf3f19828b6e08616437c8693c1fddcc8 SHA512 1d375c44cec38445e56cea252623b5b6c565680268999d4b6c14d6dc38759a27227655b2d29efaab9f9115d3677b446cb555e11cddafa0dc10c4827caaa2477b DIST gromacs-2021.7.tar.gz 38028032 BLAKE2B 2dc1b15ca8692ca5cf4ad1c7a266b9e2ced064d34a63cef61fea69e48231dd0310cfd8484d29c56cdb599f795d7655959f40038ac933b46ad2841d57bf2b3646 SHA512 ca478533da3bcb377fda30682660db8eb13beef6456fac6013a1a97ec3be60b5594567412e1e2a31392e484f9a40a22da1f12336f4738cf0422ff4f3e8814609 DIST gromacs-2022.6.tar.gz 40330705 BLAKE2B fdafbd5b2a92d6022dec3e79e961fef220f1eba42850916e7cb70ef459a8d9c6ebc8c1bbe3c105f5b23161dd5c552ec00505d7c0036649b782cf52c311498743 SHA512 91217394f534ca8f78f73189059712e1c2cd354b658722f23768b12748f7bfaf1a5e95227c5ed1b69c1a9b72c3174e9600a712c157ea2f27156387efb823dd67 -DIST gromacs-2023.3.tar.gz 42071770 BLAKE2B dea0f6b0ccd67bfa4fc58c06bd3eda6d17a7f4b1c6746c2743860cf00ba514884a27140b65b7830ca340c233510ace1734ecc09e393be3e9761e31b9e4abfeb6 SHA512 016181be78887b0e31bc7fd124ac7c25c923c6bab1ffe43d3b4a744ae68203bb9d9f976c4c81bce344f4ea8e9d610ebd5b631b2202fcd6cfefd8c1ad0ebfe10d +DIST gromacs-2023.4.tar.gz 42044149 BLAKE2B 2c13a04ddbfc167a7887d44bb6fdacde4ece4e8cf2ba920f453fc6150423c3cae39cd1afe0eebb52b9fbc72fe37fee527c83227a0f3fe21b289655b5c1cd29c5 SHA512 7913348d0da25e095b795123894f4e2007f66cf2455664edeb7bc1edc09f2e0da9911bc9501e3001278ab59917ccef838c485e6b6533c1c816c54c6dbd56350c DIST gromacs-2024.1.tar.gz 42324773 BLAKE2B 6600c802c39bf7c36d8e388ced202504dcceb3ec018d5f48af4f55e43dd170157a9b6335ce1b20a73623d05a391787936c2ab6ee48ab031d17078256eb7153c5 SHA512 fea88fac28ec142201eec1cea984eabd9db43346254ac555954a13fdbae5a5b00281a17efc8dba8ab0ac42794e3cce41b314c5cb36fb4292a1c6d2668b2ba192 DIST gromacs-2024.tar.gz 42455653 BLAKE2B 86446c5e95f9ddaf718126c409389730ee1642f36c3e0d844eb4b3a640c275e7979581365dacb57ac66daec296bbd94be6d5c0376f7255d3d3950f6759f8d69a SHA512 d64bf3cbe579003ce37dfd3d27c68746a04360d9d5491c638f3f2bd9af2c938504b0c9710c62e85225370ddf5418e6ebc2422033e46af5eee6e4aaa53699fed7 DIST manual-2018.8.pdf 10025023 BLAKE2B afb0a6e6a72d78df743fcb57e7c1716848589e571dd35167b957a9b407ca27978ccfb6cb9e0df9c9439b888f352501a00ba32281ed1e0b4193bd606f1d77152e SHA512 b1972f7ce965bfc9377542993c5943ea4868a8ed23a969d4203264746d6bea3a7a65c6379196ece37fd6d68ec7ec80f827bde87d1049284af7082759a124f1d5 @@ -11,7 +11,7 @@ DIST manual-2019.6.pdf 12702376 BLAKE2B c350127bc06a9eb3dee73da39037c84daeb89500 DIST manual-2020.7.pdf 11850780 BLAKE2B 38594e87993badfbbcf47d6010a7f67d3c3426dab85e1462916b4d62be27b5764953f912cf2b71ee24877e0bfa27b3f74431da2da81b4977d58cb66b2cc795a3 SHA512 4f184f2c90e0bac01a48069cc546cd5b04fa5f543f90dd2d68c6d17be278152fd09456b6a6c5c8236f8fb85a174d6ec7a1c7b44d437b4e6fea5d0ada73cec0f6 DIST manual-2021.7.pdf 12256526 BLAKE2B 6f298d7dac142f66914bbc2ea7d6ca70c4aeafaf33ccf12336d5cec64b1f1097b5332c767bb411ccef706ec6184479a84bcf59bda21c4249d45d8ce3dea08e79 SHA512 197765accb8ab6c5f1cc94b2697ff1817e157d85fa231dfe36a85036076e04da2a8035de66aba4f46c6dd7f553176357b94c92e1da5d1dabc574c627deee5279 DIST manual-2022.6.pdf 13081140 BLAKE2B e7ae3f23ddc076c295be2c464fe2177d6d6848d070ee5eba2b572e996ae08adead898ec6432b123802907f64983aa4d2e17426be8d540c48d12398a479519f9e SHA512 4724888b3c33c4fa4a035d5fb2f8c51496f67e1ee312676510d5ba74bc3cc1571e71e84464585b87ad0133e8e736343ae382bf8f7b556633f86a99560213d271 -DIST manual-2023.3.pdf 13565055 BLAKE2B 0332b5c4de863e9f33d7ae7404741ee8f7f503ee0d2dc723e9cc42e9fd3fb8fc74313b43589cbfc7127daec24b721ba79a3c53ff509e718992ccbde14889ea2f SHA512 144220f18bfab6fefec738a7af743bd01733a896c853963ce113354da05514941862412786f0e2183de77634b31b334814d42daae87a9009ec028ed87685 +DIST manual-2023.4.pdf 13572503 BLAKE2B f9985c6ceed2dd66d49c9e9817651b0250994aacb571a552dde6b82a7c02471409cc34622d216290e8ceb3934cf4f51d98d95e1c1f584d1deb5e64c3e02c
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gromacs/
commit: 947fdb1e06eb1ba7cdc4673cf70f0c6a1692c4bb Author: Alexey Shvetsov gentoo org> AuthorDate: Thu Feb 29 19:44:54 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Thu Feb 29 19:44:54 2024 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=947fdb1e sci-chemistry/gromacs: drop 2021.6 Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/gromacs/Manifest | 3 - sci-chemistry/gromacs/gromacs-2021.6.ebuild | 352 2 files changed, 355 deletions(-) diff --git a/sci-chemistry/gromacs/Manifest b/sci-chemistry/gromacs/Manifest index 95187d4a9a54..6a6d847781b0 100644 --- a/sci-chemistry/gromacs/Manifest +++ b/sci-chemistry/gromacs/Manifest @@ -1,7 +1,6 @@ DIST gromacs-2018.8.tar.gz 29913703 BLAKE2B 8780032305928067fbfe1559efe9eedc4d47e27ab2f6ab54d6dba39edfcbeefbee4673d8910009048a850620b5a08ba8feb622db652c439cfa50a149ec5f0015 SHA512 6717895942f2ab7b54019511ed2aebadadde8e96d3c4b7414bb9168ffe418432d2dee330192e199f7b9d2f665c71f5d4f1ef0911aa7243d525a2ca182ef5b122 DIST gromacs-2019.6.tar.gz 33446147 BLAKE2B adc21fb6b841b06d499607f8c0166a673645ef5af0b40bd823d0fff5ea24397e6301c5e1e0070986ae1ce1deba8a42052b66da148b071c1e21f2fe3908fee275 SHA512 7c227a9539e5775d5d128ae9e872a24181d79cdcd2852b86453597987e8d7332ecec371da65d089f6e610c54aafbccc8824ce298743383dd6240719ebee692a8 DIST gromacs-2020.7.tar.gz 29175554 BLAKE2B 98f1aa415946f8eb113febc81105f0c1b0919b96fc3c55a0ab83bf3950ff509b81eade92e645adb0bc2b407df239e20cf3f19828b6e08616437c8693c1fddcc8 SHA512 1d375c44cec38445e56cea252623b5b6c565680268999d4b6c14d6dc38759a27227655b2d29efaab9f9115d3677b446cb555e11cddafa0dc10c4827caaa2477b -DIST gromacs-2021.6.tar.gz 38012702 BLAKE2B 023ae37dc53643758afa050fd179cd66f3c6d6266f6afceee5eb35c890a3ae284956f2bc2409156d6e1fa03a7f23f7b04c27e1820547fd5f147b344d94da7d40 SHA512 65d7874e5cd838ce4f29d033c66304738ccc30f1987f9f8541725058b2fc4551302a399f6ce773e81ac9485963187c48feaf92c71789f4c345c82bd335f806a7 DIST gromacs-2021.7.tar.gz 38028032 BLAKE2B 2dc1b15ca8692ca5cf4ad1c7a266b9e2ced064d34a63cef61fea69e48231dd0310cfd8484d29c56cdb599f795d7655959f40038ac933b46ad2841d57bf2b3646 SHA512 ca478533da3bcb377fda30682660db8eb13beef6456fac6013a1a97ec3be60b5594567412e1e2a31392e484f9a40a22da1f12336f4738cf0422ff4f3e8814609 DIST gromacs-2022.6.tar.gz 40330705 BLAKE2B fdafbd5b2a92d6022dec3e79e961fef220f1eba42850916e7cb70ef459a8d9c6ebc8c1bbe3c105f5b23161dd5c552ec00505d7c0036649b782cf52c311498743 SHA512 91217394f534ca8f78f73189059712e1c2cd354b658722f23768b12748f7bfaf1a5e95227c5ed1b69c1a9b72c3174e9600a712c157ea2f27156387efb823dd67 DIST gromacs-2023.3.tar.gz 42071770 BLAKE2B dea0f6b0ccd67bfa4fc58c06bd3eda6d17a7f4b1c6746c2743860cf00ba514884a27140b65b7830ca340c233510ace1734ecc09e393be3e9761e31b9e4abfeb6 SHA512 016181be78887b0e31bc7fd124ac7c25c923c6bab1ffe43d3b4a744ae68203bb9d9f976c4c81bce344f4ea8e9d610ebd5b631b2202fcd6cfefd8c1ad0ebfe10d @@ -10,7 +9,6 @@ DIST gromacs-2024.tar.gz 42455653 BLAKE2B 86446c5e95f9ddaf718126c409389730ee1642 DIST manual-2018.8.pdf 10025023 BLAKE2B afb0a6e6a72d78df743fcb57e7c1716848589e571dd35167b957a9b407ca27978ccfb6cb9e0df9c9439b888f352501a00ba32281ed1e0b4193bd606f1d77152e SHA512 b1972f7ce965bfc9377542993c5943ea4868a8ed23a969d4203264746d6bea3a7a65c6379196ece37fd6d68ec7ec80f827bde87d1049284af7082759a124f1d5 DIST manual-2019.6.pdf 12702376 BLAKE2B c350127bc06a9eb3dee73da39037c84daeb89500e23cb131bd19a150bf60602d4dde7611e0c6f0f344af4093e96a899303dac71b4df56fd0c44c3a48a56606b7 SHA512 dfdff67c2c1c9ce1f1c236b7686c5331b0fe86951da6c98eddd6a3e748815e0be0a9653ae4318469fcdd913c4e7c355d64a997cc80b9d9fbe6282ef6d98e61eb DIST manual-2020.7.pdf 11850780 BLAKE2B 38594e87993badfbbcf47d6010a7f67d3c3426dab85e1462916b4d62be27b5764953f912cf2b71ee24877e0bfa27b3f74431da2da81b4977d58cb66b2cc795a3 SHA512 4f184f2c90e0bac01a48069cc546cd5b04fa5f543f90dd2d68c6d17be278152fd09456b6a6c5c8236f8fb85a174d6ec7a1c7b44d437b4e6fea5d0ada73cec0f6 -DIST manual-2021.6.pdf 12256595 BLAKE2B 5d808e38571b38c1f6e0d115f6e604238206cc001f59d05ed855e80c324c0e6fd7767adb723b3d0edd1267ae5973a3b83b76bd04d2dc99769e6440600d8e2146 SHA512 64fe56422d7417f6f61b10346c99e24c3f423f0cedc3794e0809250282bc87ef692b47ae6c3f95ad7994aa3860ed82035cbacc76eb78a2f54a29052a05260af2 DIST manual-2021.7.pdf 12256526 BLAKE2B 6f298d7dac142f66914bbc2ea7d6ca70c4aeafaf33ccf12336d5cec64b1f1097b5332c767bb411ccef706ec6184479a84bcf59bda21c4249d45d8ce3dea08e79 SHA512 197765accb8ab6c5f1cc94b2697ff1817e157d85fa231dfe36a85036076e04da2a8035de66aba4f46c6dd7f553176357b94c92e1da5d1dabc574c627deee5279 DIST manual-2022.6.pdf 13081140 BLAKE2B e7ae3f23ddc076c295be2c464fe2177d6d6848d070ee5eba2b572e996ae08adead898ec6432b123802907f64983aa4d2e17426be8d540c48d12398a479519f9e SHA512 4724888b3c33c4fa4a035d5fb2f8c51496f67e1ee312676510d5ba74bc3cc1571e71e84464585b87ad0133e8e736343ae382bf8f7b556633f86a99560213d271 DIST manual-2023.3.pdf 1356505
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gromacs/
commit: 6f41d89cd7d9db011c7f63ca92e7468e3a14ec9e Author: Alexey Shvetsov gentoo org> AuthorDate: Thu Feb 29 19:43:41 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Thu Feb 29 19:43:41 2024 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=6f41d89c sci-chemistry/gromacs: drop 2023.1-r1, 2023.2 Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/gromacs/Manifest | 6 - sci-chemistry/gromacs/gromacs-2023.1-r1.ebuild | 335 - sci-chemistry/gromacs/gromacs-2023.2.ebuild| 335 - 3 files changed, 676 deletions(-) diff --git a/sci-chemistry/gromacs/Manifest b/sci-chemistry/gromacs/Manifest index 719de00e3ba2..6a240bd34e99 100644 --- a/sci-chemistry/gromacs/Manifest +++ b/sci-chemistry/gromacs/Manifest @@ -5,8 +5,6 @@ DIST gromacs-2021.6.tar.gz 38012702 BLAKE2B 023ae37dc53643758afa050fd179cd66f3c6 DIST gromacs-2021.7.tar.gz 38028032 BLAKE2B 2dc1b15ca8692ca5cf4ad1c7a266b9e2ced064d34a63cef61fea69e48231dd0310cfd8484d29c56cdb599f795d7655959f40038ac933b46ad2841d57bf2b3646 SHA512 ca478533da3bcb377fda30682660db8eb13beef6456fac6013a1a97ec3be60b5594567412e1e2a31392e484f9a40a22da1f12336f4738cf0422ff4f3e8814609 DIST gromacs-2022.5.tar.gz 40362776 BLAKE2B e77c96cd995fb6c8284bcf9728e2f95e265911f643c69d00cc5910c6d22ada41293a1cb74033e708957776551b253453f64dba46497d68b2f73c675e94f30ddd SHA512 79310d6fd39a160e7bbc661a04540c9bcb89f40c133d1031ca16998ef0a67fc4a023f57950b22793f0c91b5fe47fd78cb2e7afedb50fe9251b1c920c9267344d DIST gromacs-2022.6.tar.gz 40330705 BLAKE2B fdafbd5b2a92d6022dec3e79e961fef220f1eba42850916e7cb70ef459a8d9c6ebc8c1bbe3c105f5b23161dd5c552ec00505d7c0036649b782cf52c311498743 SHA512 91217394f534ca8f78f73189059712e1c2cd354b658722f23768b12748f7bfaf1a5e95227c5ed1b69c1a9b72c3174e9600a712c157ea2f27156387efb823dd67 -DIST gromacs-2023.1.tar.gz 41934072 BLAKE2B 6d04642ba37a8563fafc10e0be83e33aab5ce25ef43ec2c9555e84328096bbe61426558a1433b086028f3c6637a5b3ae82241e67f206c0dd0b5254f5ec27ae4c SHA512 4bddbbc56f26487db9d35f371d65725289d1355dc4c295d32698499e05eb74e31d4db579fc1f665edb55a68b002bddacf37c0f05d3f970bc149990d434b1 -DIST gromacs-2023.2.tar.gz 41930578 BLAKE2B ee115ba45711867ced4ad08cede0e87dffd7c4e7a45ff3ee0c06b2f46b0dec838e4b532e092ce3abd993e231ca7d517d9941b371fd6d9d64d581862dc67c449c SHA512 9bc17f310e6be6fd51b7c07bde0b58e8fa15085b2c073eb7bed0db917646586dee5d7cf9b4b178e9b4cedd40d4bcd967edcc4b26debaec6f4ca94399b13b9186 DIST gromacs-2023.3.tar.gz 42071770 BLAKE2B dea0f6b0ccd67bfa4fc58c06bd3eda6d17a7f4b1c6746c2743860cf00ba514884a27140b65b7830ca340c233510ace1734ecc09e393be3e9761e31b9e4abfeb6 SHA512 016181be78887b0e31bc7fd124ac7c25c923c6bab1ffe43d3b4a744ae68203bb9d9f976c4c81bce344f4ea8e9d610ebd5b631b2202fcd6cfefd8c1ad0ebfe10d DIST gromacs-2024.1.tar.gz 42324773 BLAKE2B 6600c802c39bf7c36d8e388ced202504dcceb3ec018d5f48af4f55e43dd170157a9b6335ce1b20a73623d05a391787936c2ab6ee48ab031d17078256eb7153c5 SHA512 fea88fac28ec142201eec1cea984eabd9db43346254ac555954a13fdbae5a5b00281a17efc8dba8ab0ac42794e3cce41b314c5cb36fb4292a1c6d2668b2ba192 DIST gromacs-2024.tar.gz 42455653 BLAKE2B 86446c5e95f9ddaf718126c409389730ee1642f36c3e0d844eb4b3a640c275e7979581365dacb57ac66daec296bbd94be6d5c0376f7255d3d3950f6759f8d69a SHA512 d64bf3cbe579003ce37dfd3d27c68746a04360d9d5491c638f3f2bd9af2c938504b0c9710c62e85225370ddf5418e6ebc2422033e46af5eee6e4aaa53699fed7 @@ -17,8 +15,6 @@ DIST manual-2021.6.pdf 12256595 BLAKE2B 5d808e38571b38c1f6e0d115f6e604238206cc00 DIST manual-2021.7.pdf 12256526 BLAKE2B 6f298d7dac142f66914bbc2ea7d6ca70c4aeafaf33ccf12336d5cec64b1f1097b5332c767bb411ccef706ec6184479a84bcf59bda21c4249d45d8ce3dea08e79 SHA512 197765accb8ab6c5f1cc94b2697ff1817e157d85fa231dfe36a85036076e04da2a8035de66aba4f46c6dd7f553176357b94c92e1da5d1dabc574c627deee5279 DIST manual-2022.5.pdf 13081119 BLAKE2B 7a0ffd086d98527d42da4a22984d8351ad7861e32951e8b65c88e7d0df1559303750886ae31a7c158b4e22f616f6dd5deed9a63b0ed114bb1e0adfda9350a487 SHA512 707869ee6052f1b7f75376b0f78fcc4859035234957cc740bd770ea3bea3a591f7fc1fbc0b8526baab48eebfa506d03927df94ddc9c412c75dc2f2864574dd82 DIST manual-2022.6.pdf 13081140 BLAKE2B e7ae3f23ddc076c295be2c464fe2177d6d6848d070ee5eba2b572e996ae08adead898ec6432b123802907f64983aa4d2e17426be8d540c48d12398a479519f9e SHA512 4724888b3c33c4fa4a035d5fb2f8c51496f67e1ee312676510d5ba74bc3cc1571e71e84464585b87ad0133e8e736343ae382bf8f7b556633f86a99560213d271 -DIST manual-2023.1.pdf 13526498 BLAKE2B a9aabcb722954c9c83a8f5945c85e634b0b82ace8b9b077c3f2b9ff432ca71d3e2d5ca2dd52d6ce489d77d3d4ca7b41d75e5566205bb8855caa650fa2722e5ec SHA512 b6ca6c822ac5b3cbe3c84d8fd51d3ed465268c00bb5f96e2afa557d45f9c534b0de278f33a0fdf43080c9c619344b98cd71847e17b297a789eec4c8b42dea7b2 -DIST manual-2023.2.pdf 13547562 BLAKE2B 17155c82d968003706f974e2fb513dced28987e4630c455674d4088dcb827136e2b7b66836a2bf7f9be472254c11ab4ec98cace1462e85a7a18b0f1eb176078
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gromacs/
commit: 58ab10a00adc19c35f22eee686599099d92a8996 Author: Alexey Shvetsov gentoo org> AuthorDate: Thu Feb 29 19:47:37 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Thu Feb 29 19:47:37 2024 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=58ab10a0 sci-chemistry/gromacs: drop 2022. Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/gromacs/gromacs-2022..ebuild | 333 - 1 file changed, 333 deletions(-) diff --git a/sci-chemistry/gromacs/gromacs-2022..ebuild b/sci-chemistry/gromacs/gromacs-2022..ebuild deleted file mode 100644 index 8ebb3ae9a8dd.. --- a/sci-chemistry/gromacs/gromacs-2022..ebuild +++ /dev/null @@ -1,333 +0,0 @@ -# Copyright 1999-2024 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=8 - -CMAKE_MAKEFILE_GENERATOR="ninja" - -PYTHON_COMPAT=( python3_{10..12} ) - -DISTUTILS_OPTIONAL=1 -DISTUTILS_USE_PEP517=no -DISTUTILS_SINGLE_IMPL=1 - -inherit bash-completion-r1 cmake cuda distutils-r1 flag-o-matic readme.gentoo-r1 toolchain-funcs xdg-utils - -if [[ ${PV} = ** ]]; then - EGIT_REPO_URI=" - https://gitlab.com/gromacs/gromacs.git - https://github.com/gromacs/gromacs.git - " - [[ ${PV} = ]] && EGIT_BRANCH="master" || EGIT_BRANCH="release-${PV:0:4}" - inherit git-r3 -else - SRC_URI=" - https://ftp.gromacs.org/gromacs/${P}.tar.gz - doc? ( https://ftp.gromacs.org/manual/manual-${PV}.pdf ) - test? ( https://ftp.gromacs.org/regressiontests/regressiontests-${PV}.tar.gz )" - # since 2022 arm support was dropped (but not arm64) - KEYWORDS="~amd64 -arm ~arm64 ~x86 ~amd64-linux ~x86-linux ~x64-macos" -fi - -ACCE_IUSE="cpu_flags_x86_sse2 cpu_flags_x86_sse4_1 cpu_flags_x86_fma4 cpu_flags_x86_avx cpu_flags_x86_avx2 cpu_flags_x86_avx512f cpu_flags_arm_neon" - -DESCRIPTION="The ultimate molecular dynamics simulation package" -HOMEPAGE="https://www.gromacs.org/"; - -# see COPYING for details -# https://repo.or.cz/w/gromacs.git/blob/HEAD:/COPYING -#base,vmd plugins, fftpack from numpy, blas/lapck from netlib, memtestG80 library, mpi_thread lib -LICENSE="LGPL-2.1 UoI-NCSA !mkl? ( !fftw? ( BSD ) !blas? ( BSD ) !lapack? ( BSD ) ) cuda? ( LGPL-3 ) threads? ( BSD )" -SLOT="0/${PV}" -IUSE="blas clang clang-cuda cuda +custom-cflags +doc build-manual double-precision +fftw +gmxapi +gmxapi-legacy +hwloc lapack mkl mpi +offensive opencl openmp +python +single-precision test +threads +tng ${ACCE_IUSE}" - -CDEPEND=" - blas? ( virtual/blas ) - cuda? ( >=dev-util/nvidia-cuda-toolkit-11:=[profiler] ) - opencl? ( virtual/opencl ) - fftw? ( sci-libs/fftw:3.0= ) - hwloc? ( sys-apps/hwloc:= ) - lapack? ( virtual/lapack ) - mkl? ( sci-libs/mkl ) - mpi? ( virtual/mpi[cxx] ) - sci-libs/lmfit:= - >=dev-cpp/muParser-2.3:= - ${PYTHON_DEPS} - " -BDEPEND="${CDEPEND} - virtual/pkgconfig - clang? ( >=sys-devel/clang-6:* ) - build-manual? ( - app-text/doxygen - $(python_gen_cond_dep ' - dev-python/sphinx[${PYTHON_USEDEP}] - ') - media-gfx/mscgen - media-gfx/graphviz - dev-texlive/texlive-latex - dev-texlive/texlive-latexextra - media-gfx/imagemagick - )" -RDEPEND="${CDEPEND} - https://gitlab.com/gromacs/gromacs-regressiontests.git"; \ - EGIT_BRANCH="${EGIT_BRANCH}" \ - EGIT_CHECKOUT_DIR="${WORKDIR}/regressiontests"\ - git-r3_src_unpack - fi - fi -} - -src_prepare() { - #notes/todos - # -on apple: there is framework support - - xdg_environment_reset #591952 - - # we can use clang as default - if use clang && ! tc-is-clang ; then - export CC=${CHOST}-clang - export CXX=${CHOST}-clang++ - else - tc-export CXX CC - fi - # clang-cuda need to filter mfpmath - if use clang-cuda ; then - filter-mfpmath sse - filter-mfpmath i386 - fi - - cmake_src_prepare - - use cuda && cuda_src_prepare - - GMX_DIRS="" - use single-precision && GMX_DIRS+=" float" - use double-precision && GMX_DIRS+=" double" - - if use test; then - for x in ${GMX_DIRS}; do - mkdir -p "${WORKDIR}/${P}_${x}" || die - cp -al "${WORKDIR}/regressiontests&
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gromacs/
commit: e3b4663c9633b9293415c05486cbc7eaa7f63e7d Author: Alexey Shvetsov gentoo org> AuthorDate: Thu Feb 29 19:44:21 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Thu Feb 29 19:44:21 2024 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=e3b4663c sci-chemistry/gromacs: drop 2022.5-r1 Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/gromacs/Manifest | 3 - sci-chemistry/gromacs/gromacs-2022.5-r1.ebuild | 333 - 2 files changed, 336 deletions(-) diff --git a/sci-chemistry/gromacs/Manifest b/sci-chemistry/gromacs/Manifest index 6a240bd34e99..95187d4a9a54 100644 --- a/sci-chemistry/gromacs/Manifest +++ b/sci-chemistry/gromacs/Manifest @@ -3,7 +3,6 @@ DIST gromacs-2019.6.tar.gz 33446147 BLAKE2B adc21fb6b841b06d499607f8c0166a673645 DIST gromacs-2020.7.tar.gz 29175554 BLAKE2B 98f1aa415946f8eb113febc81105f0c1b0919b96fc3c55a0ab83bf3950ff509b81eade92e645adb0bc2b407df239e20cf3f19828b6e08616437c8693c1fddcc8 SHA512 1d375c44cec38445e56cea252623b5b6c565680268999d4b6c14d6dc38759a27227655b2d29efaab9f9115d3677b446cb555e11cddafa0dc10c4827caaa2477b DIST gromacs-2021.6.tar.gz 38012702 BLAKE2B 023ae37dc53643758afa050fd179cd66f3c6d6266f6afceee5eb35c890a3ae284956f2bc2409156d6e1fa03a7f23f7b04c27e1820547fd5f147b344d94da7d40 SHA512 65d7874e5cd838ce4f29d033c66304738ccc30f1987f9f8541725058b2fc4551302a399f6ce773e81ac9485963187c48feaf92c71789f4c345c82bd335f806a7 DIST gromacs-2021.7.tar.gz 38028032 BLAKE2B 2dc1b15ca8692ca5cf4ad1c7a266b9e2ced064d34a63cef61fea69e48231dd0310cfd8484d29c56cdb599f795d7655959f40038ac933b46ad2841d57bf2b3646 SHA512 ca478533da3bcb377fda30682660db8eb13beef6456fac6013a1a97ec3be60b5594567412e1e2a31392e484f9a40a22da1f12336f4738cf0422ff4f3e8814609 -DIST gromacs-2022.5.tar.gz 40362776 BLAKE2B e77c96cd995fb6c8284bcf9728e2f95e265911f643c69d00cc5910c6d22ada41293a1cb74033e708957776551b253453f64dba46497d68b2f73c675e94f30ddd SHA512 79310d6fd39a160e7bbc661a04540c9bcb89f40c133d1031ca16998ef0a67fc4a023f57950b22793f0c91b5fe47fd78cb2e7afedb50fe9251b1c920c9267344d DIST gromacs-2022.6.tar.gz 40330705 BLAKE2B fdafbd5b2a92d6022dec3e79e961fef220f1eba42850916e7cb70ef459a8d9c6ebc8c1bbe3c105f5b23161dd5c552ec00505d7c0036649b782cf52c311498743 SHA512 91217394f534ca8f78f73189059712e1c2cd354b658722f23768b12748f7bfaf1a5e95227c5ed1b69c1a9b72c3174e9600a712c157ea2f27156387efb823dd67 DIST gromacs-2023.3.tar.gz 42071770 BLAKE2B dea0f6b0ccd67bfa4fc58c06bd3eda6d17a7f4b1c6746c2743860cf00ba514884a27140b65b7830ca340c233510ace1734ecc09e393be3e9761e31b9e4abfeb6 SHA512 016181be78887b0e31bc7fd124ac7c25c923c6bab1ffe43d3b4a744ae68203bb9d9f976c4c81bce344f4ea8e9d610ebd5b631b2202fcd6cfefd8c1ad0ebfe10d DIST gromacs-2024.1.tar.gz 42324773 BLAKE2B 6600c802c39bf7c36d8e388ced202504dcceb3ec018d5f48af4f55e43dd170157a9b6335ce1b20a73623d05a391787936c2ab6ee48ab031d17078256eb7153c5 SHA512 fea88fac28ec142201eec1cea984eabd9db43346254ac555954a13fdbae5a5b00281a17efc8dba8ab0ac42794e3cce41b314c5cb36fb4292a1c6d2668b2ba192 @@ -13,7 +12,6 @@ DIST manual-2019.6.pdf 12702376 BLAKE2B c350127bc06a9eb3dee73da39037c84daeb89500 DIST manual-2020.7.pdf 11850780 BLAKE2B 38594e87993badfbbcf47d6010a7f67d3c3426dab85e1462916b4d62be27b5764953f912cf2b71ee24877e0bfa27b3f74431da2da81b4977d58cb66b2cc795a3 SHA512 4f184f2c90e0bac01a48069cc546cd5b04fa5f543f90dd2d68c6d17be278152fd09456b6a6c5c8236f8fb85a174d6ec7a1c7b44d437b4e6fea5d0ada73cec0f6 DIST manual-2021.6.pdf 12256595 BLAKE2B 5d808e38571b38c1f6e0d115f6e604238206cc001f59d05ed855e80c324c0e6fd7767adb723b3d0edd1267ae5973a3b83b76bd04d2dc99769e6440600d8e2146 SHA512 64fe56422d7417f6f61b10346c99e24c3f423f0cedc3794e0809250282bc87ef692b47ae6c3f95ad7994aa3860ed82035cbacc76eb78a2f54a29052a05260af2 DIST manual-2021.7.pdf 12256526 BLAKE2B 6f298d7dac142f66914bbc2ea7d6ca70c4aeafaf33ccf12336d5cec64b1f1097b5332c767bb411ccef706ec6184479a84bcf59bda21c4249d45d8ce3dea08e79 SHA512 197765accb8ab6c5f1cc94b2697ff1817e157d85fa231dfe36a85036076e04da2a8035de66aba4f46c6dd7f553176357b94c92e1da5d1dabc574c627deee5279 -DIST manual-2022.5.pdf 13081119 BLAKE2B 7a0ffd086d98527d42da4a22984d8351ad7861e32951e8b65c88e7d0df1559303750886ae31a7c158b4e22f616f6dd5deed9a63b0ed114bb1e0adfda9350a487 SHA512 707869ee6052f1b7f75376b0f78fcc4859035234957cc740bd770ea3bea3a591f7fc1fbc0b8526baab48eebfa506d03927df94ddc9c412c75dc2f2864574dd82 DIST manual-2022.6.pdf 13081140 BLAKE2B e7ae3f23ddc076c295be2c464fe2177d6d6848d070ee5eba2b572e996ae08adead898ec6432b123802907f64983aa4d2e17426be8d540c48d12398a479519f9e SHA512 4724888b3c33c4fa4a035d5fb2f8c51496f67e1ee312676510d5ba74bc3cc1571e71e84464585b87ad0133e8e736343ae382bf8f7b556633f86a99560213d271 DIST manual-2023.3.pdf 13565055 BLAKE2B 0332b5c4de863e9f33d7ae7404741ee8f7f503ee0d2dc723e9cc42e9fd3fb8fc74313b43589cbfc7127daec24b721ba79a3c53ff509e718992ccbde14889ea2f SHA512 144220f18bfab6fefec738a7af743bd01733a896c853963ce113354da05514941862412786f0e2183de77634b31b334814d42daae87a9009ec028ed87
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gromacs/
commit: bbf793a8f83fe4273bbb39802d697cb2db33510c Author: Alexey Shvetsov gentoo org> AuthorDate: Thu Feb 29 19:41:27 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Thu Feb 29 19:41:27 2024 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=bbf793a8 sci-chemistry/gromacs: add 2024.1 Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/gromacs/Manifest | 3 + sci-chemistry/gromacs/gromacs-2024.1.ebuild | 335 2 files changed, 338 insertions(+) diff --git a/sci-chemistry/gromacs/Manifest b/sci-chemistry/gromacs/Manifest index cfcc1c3e8f72..719de00e3ba2 100644 --- a/sci-chemistry/gromacs/Manifest +++ b/sci-chemistry/gromacs/Manifest @@ -8,6 +8,7 @@ DIST gromacs-2022.6.tar.gz 40330705 BLAKE2B fdafbd5b2a92d6022dec3e79e961fef220f1 DIST gromacs-2023.1.tar.gz 41934072 BLAKE2B 6d04642ba37a8563fafc10e0be83e33aab5ce25ef43ec2c9555e84328096bbe61426558a1433b086028f3c6637a5b3ae82241e67f206c0dd0b5254f5ec27ae4c SHA512 4bddbbc56f26487db9d35f371d65725289d1355dc4c295d32698499e05eb74e31d4db579fc1f665edb55a68b002bddacf37c0f05d3f970bc149990d434b1 DIST gromacs-2023.2.tar.gz 41930578 BLAKE2B ee115ba45711867ced4ad08cede0e87dffd7c4e7a45ff3ee0c06b2f46b0dec838e4b532e092ce3abd993e231ca7d517d9941b371fd6d9d64d581862dc67c449c SHA512 9bc17f310e6be6fd51b7c07bde0b58e8fa15085b2c073eb7bed0db917646586dee5d7cf9b4b178e9b4cedd40d4bcd967edcc4b26debaec6f4ca94399b13b9186 DIST gromacs-2023.3.tar.gz 42071770 BLAKE2B dea0f6b0ccd67bfa4fc58c06bd3eda6d17a7f4b1c6746c2743860cf00ba514884a27140b65b7830ca340c233510ace1734ecc09e393be3e9761e31b9e4abfeb6 SHA512 016181be78887b0e31bc7fd124ac7c25c923c6bab1ffe43d3b4a744ae68203bb9d9f976c4c81bce344f4ea8e9d610ebd5b631b2202fcd6cfefd8c1ad0ebfe10d +DIST gromacs-2024.1.tar.gz 42324773 BLAKE2B 6600c802c39bf7c36d8e388ced202504dcceb3ec018d5f48af4f55e43dd170157a9b6335ce1b20a73623d05a391787936c2ab6ee48ab031d17078256eb7153c5 SHA512 fea88fac28ec142201eec1cea984eabd9db43346254ac555954a13fdbae5a5b00281a17efc8dba8ab0ac42794e3cce41b314c5cb36fb4292a1c6d2668b2ba192 DIST gromacs-2024.tar.gz 42455653 BLAKE2B 86446c5e95f9ddaf718126c409389730ee1642f36c3e0d844eb4b3a640c275e7979581365dacb57ac66daec296bbd94be6d5c0376f7255d3d3950f6759f8d69a SHA512 d64bf3cbe579003ce37dfd3d27c68746a04360d9d5491c638f3f2bd9af2c938504b0c9710c62e85225370ddf5418e6ebc2422033e46af5eee6e4aaa53699fed7 DIST manual-2018.8.pdf 10025023 BLAKE2B afb0a6e6a72d78df743fcb57e7c1716848589e571dd35167b957a9b407ca27978ccfb6cb9e0df9c9439b888f352501a00ba32281ed1e0b4193bd606f1d77152e SHA512 b1972f7ce965bfc9377542993c5943ea4868a8ed23a969d4203264746d6bea3a7a65c6379196ece37fd6d68ec7ec80f827bde87d1049284af7082759a124f1d5 DIST manual-2019.6.pdf 12702376 BLAKE2B c350127bc06a9eb3dee73da39037c84daeb89500e23cb131bd19a150bf60602d4dde7611e0c6f0f344af4093e96a899303dac71b4df56fd0c44c3a48a56606b7 SHA512 dfdff67c2c1c9ce1f1c236b7686c5331b0fe86951da6c98eddd6a3e748815e0be0a9653ae4318469fcdd913c4e7c355d64a997cc80b9d9fbe6282ef6d98e61eb @@ -19,6 +20,7 @@ DIST manual-2022.6.pdf 13081140 BLAKE2B e7ae3f23ddc076c295be2c464fe2177d6d6848d0 DIST manual-2023.1.pdf 13526498 BLAKE2B a9aabcb722954c9c83a8f5945c85e634b0b82ace8b9b077c3f2b9ff432ca71d3e2d5ca2dd52d6ce489d77d3d4ca7b41d75e5566205bb8855caa650fa2722e5ec SHA512 b6ca6c822ac5b3cbe3c84d8fd51d3ed465268c00bb5f96e2afa557d45f9c534b0de278f33a0fdf43080c9c619344b98cd71847e17b297a789eec4c8b42dea7b2 DIST manual-2023.2.pdf 13547562 BLAKE2B 17155c82d968003706f974e2fb513dced28987e4630c455674d4088dcb827136e2b7b66836a2bf7f9be472254c11ab4ec98cace1462e85a7a18b0f1eb1760781 SHA512 b8026422fb367bf58d6ddb727afe2f1b208c9abb4eb513d85d395a19a82a7fcf362390f4ae5718fa17b0aeb7bf2c90567f40913fdc3cfc51c63d3757ab5a4905 DIST manual-2023.3.pdf 13565055 BLAKE2B 0332b5c4de863e9f33d7ae7404741ee8f7f503ee0d2dc723e9cc42e9fd3fb8fc74313b43589cbfc7127daec24b721ba79a3c53ff509e718992ccbde14889ea2f SHA512 144220f18bfab6fefec738a7af743bd01733a896c853963ce113354da05514941862412786f0e2183de77634b31b334814d42daae87a9009ec028ed87685 +DIST manual-2024.1.pdf 13651959 BLAKE2B d76e112d3d22e6638e733dec7db713aa65e16099e98935e0bfe8842966a51a04ca370e9afb62ad5b30f3adced1c67574a21445b61f3ce5a753e5d8680f87967e SHA512 3f1aa3433095983cf7ce5c54383bc384d25d9f3b22357e0360639f619c740df37ec0c827ccc9d48b8f93e3877315ee82f740c486b231f777e1be35e44fd823fe DIST manual-2024.pdf 13644437 BLAKE2B 19d547686d5c5be5e1236aba648e8afb174b281802ab76e020466953ab5d2dd98701f21eb4736cb449b61960b5b7aadce6711b2b0309a41dd1997d7383bce09e SHA512 b00048651f1f81f9024ba5c4c02ad66d2b07eb7b816f0489568fb64859cac515b885a5cb4640c8b5bd7c3620655a7ebc5fc2e4e4cbb8e952ffb0c9b5815ae661 DIST regressiontests-2018.8.tar.gz 67855469 BLAKE2B 34c9b339f6229f483afbb5192ee6ba8b8f72d5c26907a853af9c53dfece0d88739e48f6b44b78d1c010f988f9385d077285300522164f533a5861e9dda879275 SHA512 3642389d27bd1942cd0f091c940ae97b197b94856a387fe581dc516b0d4169480f16551d4ba357f9282b3337d605c286d51dd38112ac87c826dda63490483
[gentoo-commits] repo/gentoo:master commit in: media-libs/kimageannotator/
commit: 1b6122c94ad85633acc517dca5ac1b9759c33f03 Author: Alexey Shvetsov gentoo org> AuthorDate: Tue Feb 27 20:15:02 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Tue Feb 27 20:15:02 2024 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=1b6122c9 media-libs/kimageannotator: Add missing deps Bug: https://github.com/ksnip/kImageAnnotator/issues/335 Signed-off-by: Alexey Shvetsov gentoo.org> ...kimageannotator-0.7.0.ebuild => kimageannotator-0.7.0-r1.ebuild} | 6 +- 1 file changed, 5 insertions(+), 1 deletion(-) diff --git a/media-libs/kimageannotator/kimageannotator-0.7.0.ebuild b/media-libs/kimageannotator/kimageannotator-0.7.0-r1.ebuild similarity index 86% rename from media-libs/kimageannotator/kimageannotator-0.7.0.ebuild rename to media-libs/kimageannotator/kimageannotator-0.7.0-r1.ebuild index 44f907d31853..1093de12ccd1 100644 --- a/media-libs/kimageannotator/kimageannotator-0.7.0.ebuild +++ b/media-libs/kimageannotator/kimageannotator-0.7.0-r1.ebuild @@ -3,7 +3,6 @@ EAPI=8 -VIRTUALX_REQUIRED="test" inherit cmake MY_PN=kImageAnnotator @@ -25,8 +24,10 @@ RDEPEND=" dev-qt/qtbase:6[gui,widgets] dev-qt/qtsvg:6 >=media-libs/kcolorpicker-0.3.0 + x11-libs/libX11 " DEPEND="${RDEPEND} + x11-base/xorg-proto test? ( dev-cpp/gtest dev-qt/qtbase:6 @@ -44,6 +45,9 @@ src_configure() { cmake_src_configure } +# one test is failing KeyInputHelperTest +# upstream bug https://github.com/ksnip/kImageAnnotator/issues/335 + src_test() { local -x QT_QPA_PLATFORM=offscreen BUILD_DIR="${BUILD_DIR}/tests" cmake_src_test
[gentoo-commits] proj/kde:master commit in: kde-apps/gwenview/
commit: af905492fcde419994f0285a774ed9479b278f63 Author: Alexey Shvetsov gentoo org> AuthorDate: Sat Feb 24 11:18:42 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Sat Feb 24 11:18:42 2024 + URL:https://gitweb.gentoo.org/proj/kde.git/commit/?id=af905492 kde-apps/gwenview: sort deps Signed-off-by: Alexey Shvetsov gentoo.org> kde-apps/gwenview/gwenview-24.02.0.ebuild | 5 ++--- kde-apps/gwenview/gwenview-24.02.49..ebuild | 5 ++--- kde-apps/gwenview/gwenview-.ebuild | 5 ++--- 3 files changed, 6 insertions(+), 9 deletions(-) diff --git a/kde-apps/gwenview/gwenview-24.02.0.ebuild b/kde-apps/gwenview/gwenview-24.02.0.ebuild index 613641e365..ca9a5380c4 100644 --- a/kde-apps/gwenview/gwenview-24.02.0.ebuild +++ b/kde-apps/gwenview/gwenview-24.02.0.ebuild @@ -22,7 +22,6 @@ IUSE="activities fits +mpris raw semantic-desktop share X" RESTRICT="test" # slot op: includes qpa/qplatformnativeinterface.h -# TODO: When Qt6 version available: >=media-libs/kimageannotator-0.5.0, media-libs/kcolorpicker COMMON_DEPEND=" dev-libs/wayland >=dev-qt/qtbase-${QTMIN}:6=[gui,widgets] @@ -46,11 +45,11 @@ COMMON_DEPEND=" >=kde-frameworks/kxmlgui-${KFMIN}:6 >=kde-frameworks/solid-${KFMIN}:6 media-gfx/exiv2:= + >=media-libs/kimageannotator-0.7.0 + >=media-libs/kcolorpicker-0.3.0 media-libs/lcms:2 media-libs/libjpeg-turbo:= media-libs/libpng:0= - >=media-libs/kimageannotator-0.7.0 - >=media-libs/kcolorpicker-0.3.0 >=media-libs/phonon-4.12.0[qt6] media-libs/tiff:= activities? ( kde-plasma/plasma-activities:6 ) diff --git a/kde-apps/gwenview/gwenview-24.02.49..ebuild b/kde-apps/gwenview/gwenview-24.02.49..ebuild index c21d67ba47..c89021abea 100644 --- a/kde-apps/gwenview/gwenview-24.02.49..ebuild +++ b/kde-apps/gwenview/gwenview-24.02.49..ebuild @@ -22,7 +22,6 @@ IUSE="activities fits +mpris raw semantic-desktop share X" RESTRICT="test" # slot op: includes qpa/qplatformnativeinterface.h -# TODO: When Qt6 version available: >=media-libs/kimageannotator-0.5.0, media-libs/kcolorpicker COMMON_DEPEND=" dev-libs/wayland >=dev-qt/qtbase-${QTMIN}:6=[gui,widgets] @@ -46,11 +45,11 @@ COMMON_DEPEND=" >=kde-frameworks/kxmlgui-${KFMIN}:6 >=kde-frameworks/solid-${KFMIN}:6 media-gfx/exiv2:= + >=media-libs/kimageannotator-0.7.0 + >=media-libs/kcolorpicker-0.3.0 media-libs/lcms:2 media-libs/libjpeg-turbo:= media-libs/libpng:0= - >=media-libs/kimageannotator-0.7.0 - >=media-libs/kcolorpicker-0.3.0 >=media-libs/phonon-4.12.0[qt6] media-libs/tiff:= activities? ( kde-plasma/plasma-activities:6 ) diff --git a/kde-apps/gwenview/gwenview-.ebuild b/kde-apps/gwenview/gwenview-.ebuild index c21d67ba47..c89021abea 100644 --- a/kde-apps/gwenview/gwenview-.ebuild +++ b/kde-apps/gwenview/gwenview-.ebuild @@ -22,7 +22,6 @@ IUSE="activities fits +mpris raw semantic-desktop share X" RESTRICT="test" # slot op: includes qpa/qplatformnativeinterface.h -# TODO: When Qt6 version available: >=media-libs/kimageannotator-0.5.0, media-libs/kcolorpicker COMMON_DEPEND=" dev-libs/wayland >=dev-qt/qtbase-${QTMIN}:6=[gui,widgets] @@ -46,11 +45,11 @@ COMMON_DEPEND=" >=kde-frameworks/kxmlgui-${KFMIN}:6 >=kde-frameworks/solid-${KFMIN}:6 media-gfx/exiv2:= + >=media-libs/kimageannotator-0.7.0 + >=media-libs/kcolorpicker-0.3.0 media-libs/lcms:2 media-libs/libjpeg-turbo:= media-libs/libpng:0= - >=media-libs/kimageannotator-0.7.0 - >=media-libs/kcolorpicker-0.3.0 >=media-libs/phonon-4.12.0[qt6] media-libs/tiff:= activities? ( kde-plasma/plasma-activities:6 )
[gentoo-commits] proj/kde:master commit in: media-libs/kcolorpicker/, media-libs/kimageannotator/
commit: d80c0b41990dff3db14d17107a8e7fd8aefd8996 Author: Alexey Shvetsov gentoo org> AuthorDate: Sat Feb 24 11:16:11 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Sat Feb 24 11:16:11 2024 + URL:https://gitweb.gentoo.org/proj/kde.git/commit/?id=d80c0b41 media-libs/*: moved to tree Signed-off-by: Alexey Shvetsov gentoo.org> media-libs/kcolorpicker/kcolorpicker-0.3.0.ebuild | 40 -- media-libs/kcolorpicker/metadata.xml | 11 - .../kimageannotator/kimageannotator-0.7.0.ebuild | 47 -- media-libs/kimageannotator/metadata.xml| 11 - 4 files changed, 109 deletions(-) diff --git a/media-libs/kcolorpicker/kcolorpicker-0.3.0.ebuild b/media-libs/kcolorpicker/kcolorpicker-0.3.0.ebuild deleted file mode 100644 index c17d7e03ba..00 --- a/media-libs/kcolorpicker/kcolorpicker-0.3.0.ebuild +++ /dev/null @@ -1,40 +0,0 @@ -# Copyright 2020-2023 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=8 - -VIRTUALX_REQUIRED="test" -inherit cmake virtualx - -MY_PN=kColorPicker -MY_P="${MY_PN}-${PV}" - -DESCRIPTION="Qt based color picker with popup menu" -HOMEPAGE="https://github.com/ksnip/kColorPicker"; -SRC_URI="https://github.com/ksnip/${MY_PN}/archive/v${PV}.tar.gz -> ${MY_P}.tar.gz" - -LICENSE="LGPL-3+" -SLOT="0" -KEYWORDS="~amd64 ~arm64 ~loong ~ppc64 ~riscv ~x86" -IUSE="test" - -RDEPEND=" - dev-qt/qtbase:6[gui,widgets] -" -DEPEND="${RDEPEND} - test? ( dev-qt/qtbase:6[test] ) -" - -S="${WORKDIR}/${MY_P}" - -src_configure() { - local mycmakeargs=( - -DBUILD_TESTS=$(usex test) - -DBUILD_WITH_QT6=ON - ) - cmake_src_configure -} - -src_test() { - virtx cmake_src_test -} diff --git a/media-libs/kcolorpicker/metadata.xml b/media-libs/kcolorpicker/metadata.xml deleted file mode 100644 index 37a4113b8c..00 --- a/media-libs/kcolorpicker/metadata.xml +++ /dev/null @@ -1,11 +0,0 @@ - -https://www.gentoo.org/dtd/metadata.dtd";> - - - k...@gentoo.org - Gentoo KDE Project - - - ksnip/kColorPicker - - diff --git a/media-libs/kimageannotator/kimageannotator-0.7.0.ebuild b/media-libs/kimageannotator/kimageannotator-0.7.0.ebuild deleted file mode 100644 index 75ecf9d3a4..00 --- a/media-libs/kimageannotator/kimageannotator-0.7.0.ebuild +++ /dev/null @@ -1,47 +0,0 @@ -# Copyright 2020-2023 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=8 - -VIRTUALX_REQUIRED="test" -inherit cmake virtualx - -MY_PN=kImageAnnotator -MY_P="${MY_PN}-${PV}" - -DESCRIPTION="Tool for annotating images" -HOMEPAGE="https://github.com/ksnip/kImageAnnotator"; -SRC_URI="https://github.com/ksnip/${MY_PN}/archive/v${PV}.tar.gz -> ${MY_P}.tar.gz" -S="${WORKDIR}/${MY_P}" - -LICENSE="LGPL-3+" -SLOT="0" -KEYWORDS="~amd64 ~arm64 ~loong ~ppc64 ~riscv ~x86" -IUSE="test" - -RDEPEND=" - dev-qt/qtbase:6[gui,widgets] - dev-qt/qtsvg:6 - >=media-libs/kcolorpicker-0.3.0 -" -DEPEND="${RDEPEND} - test? ( - dev-qt/qtbase:6[test] - dev-cpp/gtest - ) -" -BDEPEND=" - dev-qt/qttools:6[linguist] -" - -src_configure() { - local mycmakeargs=( - -DBUILD_TESTS=$(usex test) - -DBUILD_WITH_QT6=ON - ) - cmake_src_configure -} - -src_test() { - BUILD_DIR="${BUILD_DIR}/tests" virtx cmake_src_test -} diff --git a/media-libs/kimageannotator/metadata.xml b/media-libs/kimageannotator/metadata.xml deleted file mode 100644 index 722b028b1f..00 --- a/media-libs/kimageannotator/metadata.xml +++ /dev/null @@ -1,11 +0,0 @@ - -https://www.gentoo.org/dtd/metadata.dtd";> - - - k...@gentoo.org - Gentoo KDE Project - - - ksnip/kImageAnnotator - -
[gentoo-commits] repo/gentoo:master commit in: media-libs/kimageannotator/files/, media-libs/kimageannotator/
commit: 3521346f75b35bd657d18ec59049813314752ad4 Author: Alexey Shvetsov gentoo org> AuthorDate: Sat Feb 24 11:09:58 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Sat Feb 24 11:13:33 2024 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=3521346f media-libs/kimageannotator: Version bump and restrict deps Signed-off-by: Alexey Shvetsov gentoo.org> media-libs/kimageannotator/Manifest| 1 + .../kimageannotator-0.7.0-fix-qt6-tests.patch | 117 + .../kimageannotator/kimageannotator-0.6.0.ebuild | 3 +- .../kimageannotator/kimageannotator-0.6.1.ebuild | 3 +- ...r-0.6.1.ebuild => kimageannotator-0.7.0.ebuild} | 29 ++--- media-libs/kimageannotator/metadata.xml| 7 ++ 6 files changed, 145 insertions(+), 15 deletions(-) diff --git a/media-libs/kimageannotator/Manifest b/media-libs/kimageannotator/Manifest index 2abeecfad611..bcf546abf17a 100644 --- a/media-libs/kimageannotator/Manifest +++ b/media-libs/kimageannotator/Manifest @@ -1,2 +1,3 @@ DIST kImageAnnotator-0.6.0.tar.gz 257662 BLAKE2B 3736d0e862f1d3f3f9728e4d4d611c7e406d40fe022a2441b1a80355997d86a194064ecade63b7657d3cbf1f63364b8b74654d9c92d809ac056b7dc999d97415 SHA512 5782acd552af2297813164c0612810ec0d2127c174773040d99ec9d281f3575832b06667736a5521e88fa2d57ea6410e42a5d95232cb2dbdd9608917e5d6e896 DIST kImageAnnotator-0.6.1.tar.gz 264176 BLAKE2B dfbfb50d2187572b0e68f1a699e91391fbb1fbc36f9b44f3ad97cab9e4ab3329e20ae4abe7fc68f1cf8dfd1960f2b03b3d6a6c949b4a7102b0c22d35690b8e05 SHA512 92ec8ff06011856e98e5624f9c3d98227e10991385fa41e110187db9b5d7b8de075199844e886618668040b69f8910be51b8cf55a009fac8887954c5b7695b25 +DIST kImageAnnotator-0.7.0.tar.gz 266849 BLAKE2B eda6428caf37dedc24f613e513c970a94a0b25f37ea62953a9cf4b7afe3abd01b487f5a19f1c7baa34d9f31dfa0aaefed192f23ca2e3e1f06964cc6e4a951888 SHA512 e2a6d3014476fcb6e8838c0d0aa72e4bf5ccf6fbe1314ee6c1f44bb4299c6bd1b04be305e1039628f55e5e5e1626899329d9b93314c1f1fd2870bafaf0a8e2ff diff --git a/media-libs/kimageannotator/files/kimageannotator-0.7.0-fix-qt6-tests.patch b/media-libs/kimageannotator/files/kimageannotator-0.7.0-fix-qt6-tests.patch new file mode 100644 index ..985bf108c1a3 --- /dev/null +++ b/media-libs/kimageannotator/files/kimageannotator-0.7.0-fix-qt6-tests.patch @@ -0,0 +1,117 @@ +From dbcb28f4fe8deb5ce83d45907f97516eade74420 Mon Sep 17 00:00:00 2001 +From: Heiko Becker +Date: Tue, 6 Feb 2024 18:47:20 + +Subject: [PATCH] Fix building the tests with Qt 6 (#332) + +* Remove usage of QTEST_ADD_GPU_BLACKLIST_SUPPORT_DEFS + +According to commit 641eb4a96552615d898512723e2093abcaf7fbc1 in +qtbase.git they serve no purpose anymore and were subsequently removed +in Qt6. + +Closes #331. + +* Replace QLatin1Literal with QStringLiteral + +The former is deprecated and was removed from Qt6. +--- + .../annotations/core/AnnotationPropertiesFactoryTest.cpp | 2 +- + tests/gui/annotator/tabs/AnnotationTabContextMenuTest.cpp | 6 +++--- + tests/utils/TestRunner.h | 8 + tests/widgets/settingsPicker/StickerPickerTest.cpp| 4 ++-- + 4 files changed, 6 insertions(+), 14 deletions(-) + +diff --git a/tests/annotations/core/AnnotationPropertiesFactoryTest.cpp b/tests/annotations/core/AnnotationPropertiesFactoryTest.cpp +index 77b43057..ce5047ef 100644 +--- a/tests/annotations/core/AnnotationPropertiesFactoryTest.cpp b/tests/annotations/core/AnnotationPropertiesFactoryTest.cpp +@@ -199,7 +199,7 @@ void AnnotationPropertiesFactoryTest::TestCreate_Should_SetToolFontBasedOnSettin + void AnnotationPropertiesFactoryTest::TestCreate_Should_StickerPathBasedOnSettings() + { + auto tool = Tools::Sticker; +- auto path = QLatin1Literal("/my/path/to/sticker"); ++ auto path = QStringLiteral("/my/path/to/sticker"); + MockDefaultParameters parameters; + auto settingsProvider = new MockSettingsProvider(); + settingsProvider->setSticker(path); +diff --git a/tests/gui/annotator/tabs/AnnotationTabContextMenuTest.cpp b/tests/gui/annotator/tabs/AnnotationTabContextMenuTest.cpp +index 0c4904de..a5c86d7f 100644 +--- a/tests/gui/annotator/tabs/AnnotationTabContextMenuTest.cpp b/tests/gui/annotator/tabs/AnnotationTabContextMenuTest.cpp +@@ -40,8 +40,8 @@ void AnnotationTabContextMenuTest::TestCustomActionTriggered_Should_CallInnerAct + void AnnotationTabContextMenuTest::TestAddCustomActions_Should_SetTextIconAndToolTipInOuterAction() + { + QAction customAction; +-customAction.setText(QLatin1Literal("LaLa")); +-customAction.setToolTip(QLatin1Literal("Hello Hello")); ++customAction.setText(QStringLiteral("LaLa")); ++customAction.setToolTip(QStringLiteral("Hello Hello")); + customAction.setIcon(QIcon()); + QWidget parent; + AnnotationTabContextMenu menu(&parent); +@@ -68,4 +68,4 @@ void AnnotationT
[gentoo-commits] repo/gentoo:master commit in: kde-apps/gwenview/
commit: 9b16675c6941c2306e06be0aeb4e696fde560980 Author: Alexey Shvetsov gentoo org> AuthorDate: Sat Feb 24 11:13:16 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Sat Feb 24 11:13:33 2024 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=9b16675c kde-apps/gwenview: Restrict deps Signed-off-by: Alexey Shvetsov gentoo.org> kde-apps/gwenview/gwenview-23.08.4.ebuild | 4 +++- kde-apps/gwenview/gwenview-23.08.5.ebuild | 4 +++- 2 files changed, 6 insertions(+), 2 deletions(-) diff --git a/kde-apps/gwenview/gwenview-23.08.4.ebuild b/kde-apps/gwenview/gwenview-23.08.4.ebuild index 679c54c8d039..496e5bb95e14 100644 --- a/kde-apps/gwenview/gwenview-23.08.4.ebuild +++ b/kde-apps/gwenview/gwenview-23.08.4.ebuild @@ -47,8 +47,10 @@ COMMON_DEPEND=" >=kde-frameworks/kxmlgui-${KFMIN}:5 >=kde-frameworks/solid-${KFMIN}:5 media-gfx/exiv2:= - media-libs/kcolorpicker + >=media-libs/kcolorpicker-0.2.0 + =media-libs/kimageannotator-0.5.0 +
[gentoo-commits] repo/gentoo:master commit in: media-libs/kcolorpicker/
commit: a348750f984298be2189227a2958ac19e925247d Author: Alexey Shvetsov gentoo org> AuthorDate: Sat Feb 24 11:04:04 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Sat Feb 24 11:13:33 2024 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=a348750f media-libs/kcolorpicker: add 0.3.0 Signed-off-by: Alexey Shvetsov gentoo.org> media-libs/kcolorpicker/Manifest | 1 + media-libs/kcolorpicker/kcolorpicker-0.3.0.ebuild | 40 +++ media-libs/kcolorpicker/metadata.xml | 7 3 files changed, 48 insertions(+) diff --git a/media-libs/kcolorpicker/Manifest b/media-libs/kcolorpicker/Manifest index 274afcdb904f..f57a68494be2 100644 --- a/media-libs/kcolorpicker/Manifest +++ b/media-libs/kcolorpicker/Manifest @@ -1 +1,2 @@ DIST kColorPicker-0.2.0.tar.gz 12735 BLAKE2B 39b0c80ec5b498800dd251901b0bd57c839693f071185afacefa8d5a715ff18f2297c50486d98871471c40e0904a07ff40198b548d9368937b120a1eef07929f SHA512 44f9f317ebe5dd3131a9e44071f9f5b397b0d5cceece566f3ecf19932c8e36dafe1a434e623239421bead9413f0859bc3380174d7f14843770691e4d15a956eb +DIST kColorPicker-0.3.0.tar.gz 12998 BLAKE2B 18c8f36b3efe1fa3c4ae9fb0e9d7497393561d66287e7ce6b5139e0182ddc69866685a85f4794afb7c861fcb824bfebb4f3c4badf148b4c8aa8b88b7b3483db2 SHA512 9f370ad8de0f23116f513e14ca22cb368cb5eaea53484388ca5ca0b7abc81d5071379cb84f8128f806c9ffa051ad29a95e42d4c1d30ba93034c0ae9fd785bb8c diff --git a/media-libs/kcolorpicker/kcolorpicker-0.3.0.ebuild b/media-libs/kcolorpicker/kcolorpicker-0.3.0.ebuild new file mode 100644 index ..7910473385cc --- /dev/null +++ b/media-libs/kcolorpicker/kcolorpicker-0.3.0.ebuild @@ -0,0 +1,40 @@ +# Copyright 2020-2024 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +VIRTUALX_REQUIRED="test" +inherit cmake virtualx + +MY_PN=kColorPicker +MY_P="${MY_PN}-${PV}" + +DESCRIPTION="Qt based color picker with popup menu" +HOMEPAGE="https://github.com/ksnip/kColorPicker"; +SRC_URI="https://github.com/ksnip/${MY_PN}/archive/v${PV}.tar.gz -> ${MY_P}.tar.gz" + +LICENSE="LGPL-3+" +SLOT="0" +KEYWORDS="~amd64 ~arm64 ~loong ~ppc64 ~riscv ~x86" +IUSE="test" + +RDEPEND=" + dev-qt/qtbase:6[gui,widgets] +" +DEPEND="${RDEPEND} + test? ( dev-qt/qtbase:6[test] ) +" + +S="${WORKDIR}/${MY_P}" + +src_configure() { + local mycmakeargs=( + -DBUILD_TESTS=$(usex test) + -DBUILD_WITH_QT6=ON + ) + cmake_src_configure +} + +src_test() { + virtx cmake_src_test +} diff --git a/media-libs/kcolorpicker/metadata.xml b/media-libs/kcolorpicker/metadata.xml index b9657fa6506a..6714b2f40edc 100644 --- a/media-libs/kcolorpicker/metadata.xml +++ b/media-libs/kcolorpicker/metadata.xml @@ -9,8 +9,15 @@ proxy-ma...@gentoo.org Proxy Maintainers + + k...@gentoo.org + Gentoo KDE Project + QToolButton with color popup menu with lets you select a color. The popup features a color dialog button which can be used to add custom colors to the popup menu. + + ksnip/kColorPicker +
[gentoo-commits] proj/kde:master commit in: kde-apps/gwenview/
commit: 54d0efc2e8f1ca6be53ddbaaccd40fa8846eb727 Author: Alexey Shvetsov gentoo org> AuthorDate: Sat Feb 24 08:49:29 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Sat Feb 24 08:49:29 2024 + URL:https://gitweb.gentoo.org/proj/kde.git/commit/?id=54d0efc2 kde-apps/gwenview: Add required dep kimageannotator Signed-off-by: Alexey Shvetsov gentoo.org> kde-apps/gwenview/gwenview-24.02.0.ebuild | 2 ++ kde-apps/gwenview/gwenview-24.02.49..ebuild | 2 ++ kde-apps/gwenview/gwenview-.ebuild | 2 ++ 3 files changed, 6 insertions(+) diff --git a/kde-apps/gwenview/gwenview-24.02.0.ebuild b/kde-apps/gwenview/gwenview-24.02.0.ebuild index 6504b5e1f9..613641e365 100644 --- a/kde-apps/gwenview/gwenview-24.02.0.ebuild +++ b/kde-apps/gwenview/gwenview-24.02.0.ebuild @@ -49,6 +49,8 @@ COMMON_DEPEND=" media-libs/lcms:2 media-libs/libjpeg-turbo:= media-libs/libpng:0= + >=media-libs/kimageannotator-0.7.0 + >=media-libs/kcolorpicker-0.3.0 >=media-libs/phonon-4.12.0[qt6] media-libs/tiff:= activities? ( kde-plasma/plasma-activities:6 ) diff --git a/kde-apps/gwenview/gwenview-24.02.49..ebuild b/kde-apps/gwenview/gwenview-24.02.49..ebuild index 9d9d7a583b..c21d67ba47 100644 --- a/kde-apps/gwenview/gwenview-24.02.49..ebuild +++ b/kde-apps/gwenview/gwenview-24.02.49..ebuild @@ -49,6 +49,8 @@ COMMON_DEPEND=" media-libs/lcms:2 media-libs/libjpeg-turbo:= media-libs/libpng:0= + >=media-libs/kimageannotator-0.7.0 + >=media-libs/kcolorpicker-0.3.0 >=media-libs/phonon-4.12.0[qt6] media-libs/tiff:= activities? ( kde-plasma/plasma-activities:6 ) diff --git a/kde-apps/gwenview/gwenview-.ebuild b/kde-apps/gwenview/gwenview-.ebuild index 9d9d7a583b..c21d67ba47 100644 --- a/kde-apps/gwenview/gwenview-.ebuild +++ b/kde-apps/gwenview/gwenview-.ebuild @@ -49,6 +49,8 @@ COMMON_DEPEND=" media-libs/lcms:2 media-libs/libjpeg-turbo:= media-libs/libpng:0= + >=media-libs/kimageannotator-0.7.0 + >=media-libs/kcolorpicker-0.3.0 >=media-libs/phonon-4.12.0[qt6] media-libs/tiff:= activities? ( kde-plasma/plasma-activities:6 )
[gentoo-commits] proj/kde:master commit in: media-libs/kcolorpicker/
commit: 09c7a4f75282b7783b53c22af2385598be354ea3 Author: Alexey Shvetsov gentoo org> AuthorDate: Sat Feb 24 08:45:19 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Sat Feb 24 08:45:19 2024 + URL:https://gitweb.gentoo.org/proj/kde.git/commit/?id=09c7a4f7 media-libs/kcolorpicker: new package, add 0.3.0 Signed-off-by: Alexey Shvetsov gentoo.org> media-libs/kcolorpicker/kcolorpicker-0.3.0.ebuild | 40 +++ media-libs/kcolorpicker/metadata.xml | 11 +++ 2 files changed, 51 insertions(+) diff --git a/media-libs/kcolorpicker/kcolorpicker-0.3.0.ebuild b/media-libs/kcolorpicker/kcolorpicker-0.3.0.ebuild new file mode 100644 index 00..c17d7e03ba --- /dev/null +++ b/media-libs/kcolorpicker/kcolorpicker-0.3.0.ebuild @@ -0,0 +1,40 @@ +# Copyright 2020-2023 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +VIRTUALX_REQUIRED="test" +inherit cmake virtualx + +MY_PN=kColorPicker +MY_P="${MY_PN}-${PV}" + +DESCRIPTION="Qt based color picker with popup menu" +HOMEPAGE="https://github.com/ksnip/kColorPicker"; +SRC_URI="https://github.com/ksnip/${MY_PN}/archive/v${PV}.tar.gz -> ${MY_P}.tar.gz" + +LICENSE="LGPL-3+" +SLOT="0" +KEYWORDS="~amd64 ~arm64 ~loong ~ppc64 ~riscv ~x86" +IUSE="test" + +RDEPEND=" + dev-qt/qtbase:6[gui,widgets] +" +DEPEND="${RDEPEND} + test? ( dev-qt/qtbase:6[test] ) +" + +S="${WORKDIR}/${MY_P}" + +src_configure() { + local mycmakeargs=( + -DBUILD_TESTS=$(usex test) + -DBUILD_WITH_QT6=ON + ) + cmake_src_configure +} + +src_test() { + virtx cmake_src_test +} diff --git a/media-libs/kcolorpicker/metadata.xml b/media-libs/kcolorpicker/metadata.xml new file mode 100644 index 00..37a4113b8c --- /dev/null +++ b/media-libs/kcolorpicker/metadata.xml @@ -0,0 +1,11 @@ + +https://www.gentoo.org/dtd/metadata.dtd";> + + + k...@gentoo.org + Gentoo KDE Project + + + ksnip/kColorPicker + +
[gentoo-commits] proj/kde:master commit in: media-libs/kimageannotator/
commit: 586de8dc601d1bdde441e33c22a10637605758ed Author: Alexey Shvetsov gentoo org> AuthorDate: Sat Feb 24 08:47:42 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Sat Feb 24 08:47:42 2024 + URL:https://gitweb.gentoo.org/proj/kde.git/commit/?id=586de8dc media-libs/kimageannotator: new package, add 0.7.0 Signed-off-by: Alexey Shvetsov gentoo.org> .../kimageannotator/kimageannotator-0.7.0.ebuild | 47 ++ media-libs/kimageannotator/metadata.xml| 11 + 2 files changed, 58 insertions(+) diff --git a/media-libs/kimageannotator/kimageannotator-0.7.0.ebuild b/media-libs/kimageannotator/kimageannotator-0.7.0.ebuild new file mode 100644 index 00..75ecf9d3a4 --- /dev/null +++ b/media-libs/kimageannotator/kimageannotator-0.7.0.ebuild @@ -0,0 +1,47 @@ +# Copyright 2020-2023 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +VIRTUALX_REQUIRED="test" +inherit cmake virtualx + +MY_PN=kImageAnnotator +MY_P="${MY_PN}-${PV}" + +DESCRIPTION="Tool for annotating images" +HOMEPAGE="https://github.com/ksnip/kImageAnnotator"; +SRC_URI="https://github.com/ksnip/${MY_PN}/archive/v${PV}.tar.gz -> ${MY_P}.tar.gz" +S="${WORKDIR}/${MY_P}" + +LICENSE="LGPL-3+" +SLOT="0" +KEYWORDS="~amd64 ~arm64 ~loong ~ppc64 ~riscv ~x86" +IUSE="test" + +RDEPEND=" + dev-qt/qtbase:6[gui,widgets] + dev-qt/qtsvg:6 + >=media-libs/kcolorpicker-0.3.0 +" +DEPEND="${RDEPEND} + test? ( + dev-qt/qtbase:6[test] + dev-cpp/gtest + ) +" +BDEPEND=" + dev-qt/qttools:6[linguist] +" + +src_configure() { + local mycmakeargs=( + -DBUILD_TESTS=$(usex test) + -DBUILD_WITH_QT6=ON + ) + cmake_src_configure +} + +src_test() { + BUILD_DIR="${BUILD_DIR}/tests" virtx cmake_src_test +} diff --git a/media-libs/kimageannotator/metadata.xml b/media-libs/kimageannotator/metadata.xml new file mode 100644 index 00..722b028b1f --- /dev/null +++ b/media-libs/kimageannotator/metadata.xml @@ -0,0 +1,11 @@ + +https://www.gentoo.org/dtd/metadata.dtd";> + + + k...@gentoo.org + Gentoo KDE Project + + + ksnip/kImageAnnotator + +
[gentoo-commits] repo/gentoo:master commit in: /
commit: 64f0396fbb2a5bb39a6f558b79586ee090fbfaf7 Author: Alexey Shvetsov gentoo org> AuthorDate: Sat Feb 17 11:05:07 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Sat Feb 17 11:05:07 2024 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=64f0396f .mailmap: add my emails Signed-off-by: Alexey Shvetsov gentoo.org> .mailmap | 1 + 1 file changed, 1 insertion(+) diff --git a/.mailmap b/.mailmap index ad6d04a44462..8b55e37bc5e2 100644 --- a/.mailmap +++ b/.mailmap @@ -2,6 +2,7 @@ # before joining and after retiring, as well as the usual uses of .mailmap. # See gitmailmap(5) for format details. # Please keep this list sorted. Use "LC_ALL=en_US.utf-8 grep -v '^#' .mailmap | sort" +Alexey Shvetsov Andrew Ammerlaan Andrew Ammerlaan Andrew Ammerlaan
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gromacs/
commit: 58401fa12262cbdaa3029d41d18e9615fdedba3f Author: Alexey Shvetsov gentoo org> AuthorDate: Thu Feb 1 13:06:17 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Thu Feb 1 13:06:17 2024 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=58401fa1 sci-chemistry/gromacs: add 2024, drop 2024_rc Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/gromacs/Manifest | 6 +++--- .../gromacs/{gromacs-2024_rc.ebuild => gromacs-2024.ebuild} | 0 2 files changed, 3 insertions(+), 3 deletions(-) diff --git a/sci-chemistry/gromacs/Manifest b/sci-chemistry/gromacs/Manifest index 6a26873979d3..cfcc1c3e8f72 100644 --- a/sci-chemistry/gromacs/Manifest +++ b/sci-chemistry/gromacs/Manifest @@ -8,7 +8,7 @@ DIST gromacs-2022.6.tar.gz 40330705 BLAKE2B fdafbd5b2a92d6022dec3e79e961fef220f1 DIST gromacs-2023.1.tar.gz 41934072 BLAKE2B 6d04642ba37a8563fafc10e0be83e33aab5ce25ef43ec2c9555e84328096bbe61426558a1433b086028f3c6637a5b3ae82241e67f206c0dd0b5254f5ec27ae4c SHA512 4bddbbc56f26487db9d35f371d65725289d1355dc4c295d32698499e05eb74e31d4db579fc1f665edb55a68b002bddacf37c0f05d3f970bc149990d434b1 DIST gromacs-2023.2.tar.gz 41930578 BLAKE2B ee115ba45711867ced4ad08cede0e87dffd7c4e7a45ff3ee0c06b2f46b0dec838e4b532e092ce3abd993e231ca7d517d9941b371fd6d9d64d581862dc67c449c SHA512 9bc17f310e6be6fd51b7c07bde0b58e8fa15085b2c073eb7bed0db917646586dee5d7cf9b4b178e9b4cedd40d4bcd967edcc4b26debaec6f4ca94399b13b9186 DIST gromacs-2023.3.tar.gz 42071770 BLAKE2B dea0f6b0ccd67bfa4fc58c06bd3eda6d17a7f4b1c6746c2743860cf00ba514884a27140b65b7830ca340c233510ace1734ecc09e393be3e9761e31b9e4abfeb6 SHA512 016181be78887b0e31bc7fd124ac7c25c923c6bab1ffe43d3b4a744ae68203bb9d9f976c4c81bce344f4ea8e9d610ebd5b631b2202fcd6cfefd8c1ad0ebfe10d -DIST gromacs-2024-rc.tar.gz 42467347 BLAKE2B ee9e8dd15f5fc4df267678689b2ee22beb1de0a16ed3c620063d25b3e9df2295415dccf03e9aac7b7834e0ccca4ca1aa9b6db68aacc63399f947ed6d40b0025d SHA512 fe2de756b5dfa4d64fd974e3ffd1af561edb6102e42f2443fe27d9c06e6c0ed3afcd31c38ecab4de253e531a1d8a546690e2231ba20a5bdd4bc204491dc1b4fc +DIST gromacs-2024.tar.gz 42455653 BLAKE2B 86446c5e95f9ddaf718126c409389730ee1642f36c3e0d844eb4b3a640c275e7979581365dacb57ac66daec296bbd94be6d5c0376f7255d3d3950f6759f8d69a SHA512 d64bf3cbe579003ce37dfd3d27c68746a04360d9d5491c638f3f2bd9af2c938504b0c9710c62e85225370ddf5418e6ebc2422033e46af5eee6e4aaa53699fed7 DIST manual-2018.8.pdf 10025023 BLAKE2B afb0a6e6a72d78df743fcb57e7c1716848589e571dd35167b957a9b407ca27978ccfb6cb9e0df9c9439b888f352501a00ba32281ed1e0b4193bd606f1d77152e SHA512 b1972f7ce965bfc9377542993c5943ea4868a8ed23a969d4203264746d6bea3a7a65c6379196ece37fd6d68ec7ec80f827bde87d1049284af7082759a124f1d5 DIST manual-2019.6.pdf 12702376 BLAKE2B c350127bc06a9eb3dee73da39037c84daeb89500e23cb131bd19a150bf60602d4dde7611e0c6f0f344af4093e96a899303dac71b4df56fd0c44c3a48a56606b7 SHA512 dfdff67c2c1c9ce1f1c236b7686c5331b0fe86951da6c98eddd6a3e748815e0be0a9653ae4318469fcdd913c4e7c355d64a997cc80b9d9fbe6282ef6d98e61eb DIST manual-2020.7.pdf 11850780 BLAKE2B 38594e87993badfbbcf47d6010a7f67d3c3426dab85e1462916b4d62be27b5764953f912cf2b71ee24877e0bfa27b3f74431da2da81b4977d58cb66b2cc795a3 SHA512 4f184f2c90e0bac01a48069cc546cd5b04fa5f543f90dd2d68c6d17be278152fd09456b6a6c5c8236f8fb85a174d6ec7a1c7b44d437b4e6fea5d0ada73cec0f6 @@ -19,7 +19,7 @@ DIST manual-2022.6.pdf 13081140 BLAKE2B e7ae3f23ddc076c295be2c464fe2177d6d6848d0 DIST manual-2023.1.pdf 13526498 BLAKE2B a9aabcb722954c9c83a8f5945c85e634b0b82ace8b9b077c3f2b9ff432ca71d3e2d5ca2dd52d6ce489d77d3d4ca7b41d75e5566205bb8855caa650fa2722e5ec SHA512 b6ca6c822ac5b3cbe3c84d8fd51d3ed465268c00bb5f96e2afa557d45f9c534b0de278f33a0fdf43080c9c619344b98cd71847e17b297a789eec4c8b42dea7b2 DIST manual-2023.2.pdf 13547562 BLAKE2B 17155c82d968003706f974e2fb513dced28987e4630c455674d4088dcb827136e2b7b66836a2bf7f9be472254c11ab4ec98cace1462e85a7a18b0f1eb1760781 SHA512 b8026422fb367bf58d6ddb727afe2f1b208c9abb4eb513d85d395a19a82a7fcf362390f4ae5718fa17b0aeb7bf2c90567f40913fdc3cfc51c63d3757ab5a4905 DIST manual-2023.3.pdf 13565055 BLAKE2B 0332b5c4de863e9f33d7ae7404741ee8f7f503ee0d2dc723e9cc42e9fd3fb8fc74313b43589cbfc7127daec24b721ba79a3c53ff509e718992ccbde14889ea2f SHA512 144220f18bfab6fefec738a7af743bd01733a896c853963ce113354da05514941862412786f0e2183de77634b31b334814d42daae87a9009ec028ed87685 -DIST manual-2024-rc.pdf 13645392 BLAKE2B 06456a805b7e85924c34d6b940d32e6e9eae1a117e50a02cfe2dd909e79968a69a78eca95ec765671ea30cdc74a1c6c9314dfa2cd8da50ef378f6f7c685e068f SHA512 b20eaea8d6fcd260018bbac76c33e4994f85bd470d6c111ced3b32f0ff805834c4c18020adfc643ec1cf7d10172b5a5a5f4ed404b912ddf25646d16f36e21d54 +DIST manual-2024.pdf 13644437 BLAKE2B 19d547686d5c5be5e1236aba648e8afb174b281802ab76e020466953ab5d2dd98701f21eb4736cb449b61960b5b7aadce6711b2b0309a41dd1997d7383bc
[gentoo-commits] repo/gentoo:master commit in: media-gfx/prusaslicer/
commit: bf0b0fc0730c2da427db8ccb228c5b0aaf9cb78a Author: Alexey Shvetsov gentoo org> AuthorDate: Thu Feb 1 13:00:44 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Thu Feb 1 13:02:16 2024 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=bf0b0fc0 media-gfx/prusaslicer: add 2.7.1 Signed-off-by: Alexey Shvetsov gentoo.org> media-gfx/prusaslicer/Manifest | 1 + media-gfx/prusaslicer/prusaslicer-2.7.1.ebuild | 88 ++ 2 files changed, 89 insertions(+) diff --git a/media-gfx/prusaslicer/Manifest b/media-gfx/prusaslicer/Manifest index e0b6484d7d81..a55b73005349 100644 --- a/media-gfx/prusaslicer/Manifest +++ b/media-gfx/prusaslicer/Manifest @@ -1,3 +1,4 @@ DIST prusaslicer-2.5.2.tar.gz 49039089 BLAKE2B f1489cac7f23977da30da130faab15336c0f31eee8f197804122e46e62e030a17baf97f744019673e3adc9aff7413380f5c0513fa3d9e3044d56c32d4c95e5b8 SHA512 7d17ce358f742ef44725b0b4160be3ddc522d2160d0b467589a1def82b2f478108e4934efb80feff043435b69fe7e81f18146277f67ec1819d9a0150fa9942a2 DIST prusaslicer-2.6.0.tar.gz 56430180 BLAKE2B 7d6a0344f558d5788676364262f9e2b878a01e199fa8c95cda87c801c84fd02d5fc9df5a16096d36ec2e02ea54c8189165d524d8e7f73f66526fba6e5c60e55b SHA512 c6133f09ccee5c3c6f1e6e3aebfee749fb0138e830d93ed42b19063b89738162095fa7c017695643b736099750bb56d6bd8174f8bf18a6f0703811703bfb508c DIST prusaslicer-2.6.1.tar.gz 58479800 BLAKE2B d5bfe09a76c5e1e5d3f5fae350db27db61e1f90465db42b5573314c58d77c89d3c04e67b45c449374570b7c1a0ee13bf7984b011f751a71e3b1414759cc921e9 SHA512 2b04eeff4feca2afd560b2fb6a5bbdaae6cabed2180d1416f2e4c7c385a50f859ec334c864a737b7c09eb3fd88f80af68655a0ef25ce9216b16549b16b3020b0 +DIST prusaslicer-2.7.1.tar.gz 64975776 BLAKE2B 7683e2c97458da6b6f2b0e826f538d556f011e4580246277a926df55a71c5a4668089235b8b13379646e1730d301c446cd5d9116e236986cb29bb322390ba94f SHA512 20037164b8a8853e2f30a5ed613e0da1d02d6fa581c21ef67a51e90af3c33a98eb75e0b3a203adfb8ed7bc67f32de7ea598f3f0ab9c68341738db0c1c1974b3d diff --git a/media-gfx/prusaslicer/prusaslicer-2.7.1.ebuild b/media-gfx/prusaslicer/prusaslicer-2.7.1.ebuild new file mode 100644 index ..2a926a3e0102 --- /dev/null +++ b/media-gfx/prusaslicer/prusaslicer-2.7.1.ebuild @@ -0,0 +1,88 @@ +# Copyright 1999-2024 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +WX_GTK_VER="3.2-gtk3" +MY_PN="PrusaSlicer" +MY_PV="$(ver_rs 3 -)" + +inherit cmake wxwidgets xdg + +DESCRIPTION="A mesh slicer to generate G-code for fused-filament-fabrication (3D printers)" +HOMEPAGE="https://www.prusa3d.com/prusaslicer/"; +SRC_URI="https://github.com/prusa3d/PrusaSlicer/archive/refs/tags/version_${MY_PV}.tar.gz -> ${P}.tar.gz" + +LICENSE="AGPL-3 Boost-1.0 GPL-2 LGPL-3 MIT" +SLOT="0" +KEYWORDS="~amd64 ~arm64 ~x86" +IUSE="test" + +RESTRICT="test" + +RDEPEND=" + dev-cpp/eigen:3 + dev-cpp/tbb:= + dev-libs/boost:=[nls] + dev-libs/cereal + dev-libs/expat + dev-libs/glib:2 + dev-libs/gmp:= + dev-libs/mpfr:= + media-gfx/openvdb:= + media-gfx/libbgcode + net-misc/curl[adns] + media-libs/glew:0= + media-libs/libjpeg-turbo:= + media-libs/libpng:0= + media-libs/qhull:= + sci-libs/libigl + sci-libs/nlopt + sci-libs/opencascade:= + sci-mathematics/cgal:= + sys-apps/dbus + sys-libs/zlib:= + virtual/opengl + x11-libs/gtk+:3 + >=x11-libs/wxGTK-3.2.2.1-r3:${WX_GTK_VER}[X,opengl] + media-libs/nanosvg:= +" +DEPEND="${RDEPEND} + media-libs/qhull[static-libs] +" + +PATCHES=( + "${FILESDIR}/${PN}-2.6.0-libexpat-double-definition-fix.patch" + "${FILESDIR}/${PN}-2.6.0-dont-force-link-to-wayland-and-x11.patch" +) + +S="${WORKDIR}/${MY_PN}-version_${MY_PV}" + +src_prepare() { + sed -i -e 's/PrusaSlicer-${SLIC3R_VERSION}+UNKNOWN/PrusaSlicer-${SLIC3R_VERSION}+Gentoo/g' version.inc || die + + sed -i -e 's/find_package(OpenCASCADE 7.6.2 REQUIRED)/find_package(OpenCASCADE REQUIRED)/g' \ + src/occt_wrapper/CMakeLists.txt || die + cmake_src_prepare +} + +src_configure() { + CMAKE_BUILD_TYPE="Release" + + setup-wxwidgets + + local mycmakeargs=( + -DOPENVDB_FIND_MODULE_PATH="/usr/$(get_libdir)/cmake/OpenVDB" + + -DSLIC3R_BUILD_TESTS=$(usex test) + -DSLIC3R_FHS=ON + -DSLIC3R_GTK=3 + -DSLIC3R_GUI=ON + -DSLIC3R_PCH=OFF + -DSLIC3R_STATIC=OFF + -DSLIC3R_WX_STABLE=ON + -Wno-dev + ) + + cmake_src_configure +}
[gentoo-commits] repo/gentoo:master commit in: dev-libs/heatshrink/, dev-libs/heatshrink/files/
commit: 5fbfd251026407e1f93c7542e3828bafce981a52 Author: Alexey Shvetsov gentoo org> AuthorDate: Thu Feb 1 12:14:01 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Thu Feb 1 13:02:14 2024 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=5fbfd251 dev-libs/heatshrink: new package, add 0.4.1 Signed-off-by: Alexey Shvetsov gentoo.org> dev-libs/heatshrink/Manifest | 1 + .../heatshrink/files/heatshrink-0.4.1-cmake.patch | 108 + dev-libs/heatshrink/heatshrink-0.4.1.ebuild| 16 +++ dev-libs/heatshrink/metadata.xml | 16 +++ 4 files changed, 141 insertions(+) diff --git a/dev-libs/heatshrink/Manifest b/dev-libs/heatshrink/Manifest new file mode 100644 index ..b2379309357b --- /dev/null +++ b/dev-libs/heatshrink/Manifest @@ -0,0 +1 @@ +DIST heatshrink-0.4.1.tar.gz 36945 BLAKE2B 526e3f88ddaec8116e5eef1a73a4450454ca808545dfe4a36069be8a0d771ca92c850c51f9b3c3e73f244454ba17d03da8fb0be4849728300c7eb8181e39651e SHA512 bb9610b963da0762b1ac21d0907f3801b525431abff495b66cadc244a2b2b334441de2b14442b722bfeb56cb4459fe4021eae0d0454f9e26a80e6efa11f079d2 diff --git a/dev-libs/heatshrink/files/heatshrink-0.4.1-cmake.patch b/dev-libs/heatshrink/files/heatshrink-0.4.1-cmake.patch new file mode 100644 index ..3230949b84bf --- /dev/null +++ b/dev-libs/heatshrink/files/heatshrink-0.4.1-cmake.patch @@ -0,0 +1,108 @@ +diff -urN heatshrink-0.4.1.orig/CMakeLists.txt heatshrink-0.4.1/CMakeLists.txt +--- heatshrink-0.4.1.orig/CMakeLists.txt 1970-01-01 03:00:00.0 +0300 heatshrink-0.4.1/CMakeLists.txt2024-02-01 15:11:32.356696150 +0300 +@@ -0,0 +1,93 @@ ++cmake_minimum_required(VERSION 3.10) ++ ++project(heatshrink LANGUAGES C VERSION 0.4.1) ++ ++set(CMAKE_C_STANDARD 99) ++set(CMAKE_C_STANDARD_REQUIRED ON) ++set(CMAKE_WINDOWS_EXPORT_ALL_SYMBOLS ON) ++ ++add_library(${PROJECT_NAME} heatshrink_decoder.c heatshrink_encoder.c) ++add_library(${PROJECT_NAME}_dynalloc heatshrink_decoder.c heatshrink_encoder.c) ++ ++find_library(MATH_LIBRARY m) # Business as usual ++if(MATH_LIBRARY) ++target_link_libraries(${PROJECT_NAME} PUBLIC ${MATH_LIBRARY}) ++endif() ++ ++target_include_directories(${PROJECT_NAME} PUBLIC $) ++target_include_directories(${PROJECT_NAME}_dynalloc PUBLIC $) ++ ++target_compile_definitions(${PROJECT_NAME} PUBLIC HEATSHRINK_DYNAMIC_ALLOC=0) ++target_compile_definitions(${PROJECT_NAME}_dynalloc PUBLIC HEATSHRINK_DYNAMIC_ALLOC=1) ++ ++if (UNIX) ++ add_executable(${PROJECT_NAME}_cmd heatshrink.c) ++ target_link_libraries(${PROJECT_NAME}_cmd ${PROJECT_NAME}_dynalloc) ++ set_target_properties(${PROJECT_NAME}_cmd PROPERTIES OUTPUT_NAME ${PROJECT_NAME}) ++endif () ++ ++foreach (tgt ${PROJECT_NAME} ${PROJECT_NAME}_dynalloc) ++ set_target_properties(${tgt} ++PROPERTIES ++VERSION ${PROJECT_VERSION} ++SOVERSION ${PROJECT_VERSION}) ++endforeach() ++ ++# Installation and export: ++ ++include(CMakePackageConfigHelpers) ++ ++write_basic_package_version_file( ++"${CMAKE_CURRENT_BINARY_DIR}/${PROJECT_NAME}ConfigVersion.cmake" ++VERSION ${PROJECT_VERSION} ++COMPATIBILITY AnyNewerVersion ++) ++ ++set(_exported_targets ${PROJECT_NAME} ${PROJECT_NAME}_dynalloc) ++if (UNIX) ++ list(APPEND _exported_targets ${PROJECT_NAME}_cmd) ++endif () ++ ++install(TARGETS ${_exported_targets} ++EXPORT ${PROJECT_NAME}Targets ++) ++ ++export(EXPORT ${PROJECT_NAME}Targets ++ FILE "${CMAKE_CURRENT_BINARY_DIR}/${PROJECT_NAME}Targets.cmake" ++ NAMESPACE ${PROJECT_NAME}:: ++) ++ ++include(GNUInstallDirs) ++set(ConfigPackageLocation ${CMAKE_INSTALL_LIBDIR}/cmake/${PROJECT_NAME}) ++ ++configure_package_config_file(${CMAKE_CURRENT_SOURCE_DIR}/Config.cmake.in ++ "${CMAKE_CURRENT_BINARY_DIR}/${PROJECT_NAME}Config.cmake" ++ INSTALL_DESTINATION ${ConfigPackageLocation} ++) ++ ++install( ++FILES ++ heatshrink_common.h ++ heatshrink_config.h ++ heatshrink_encoder.h ++ heatshrink_decoder.h ++DESTINATION ++ include/${PROJECT_NAME} ++ ) ++ ++install(EXPORT ${PROJECT_NAME}Targets ++ FILE ++${PROJECT_NAME}Targets.cmake ++ NAMESPACE ++${PROJECT_NAME}:: ++ DESTINATION ++${ConfigPackageLocation} ++) ++ ++install( ++ FILES ++"${CMAKE_CURRENT_BINARY_DIR}/${PROJECT_NAME}Config.cmake" ++"${CMAKE_CURRENT_BINARY_DIR}/${PROJECT_NAME}ConfigVersion.cmake" ++ DESTINATION ++${ConfigPackageLocation} ++) +\ В конце файла нет новой строки +diff -urN heatshrink-0.4.1.orig/Config.cmake.in heatshrink-0.4.1/Config.cmake.in +--- heatshrink-0.4.1.orig/Config.cmake.in 1970-01-01 03:00:00.0 +0300 heatshrink-0.4.1/Config.cmake.in 2024-02-01 15:11:32.356696150 +0300 +@@ -0,0 +1,5 @@ ++@PACKAGE_INIT@ ++ ++if (EXISTS ${CMAKE_CURRENT_LIST_DIR}/@PROJECT_NAME@Targets.cmake) ++include("${CMAKE_CURRENT_LIST_DIR}/@PROJECT_NAME@Targets.
[gentoo-commits] repo/gentoo:master commit in: media-gfx/libbgcode/
commit: 6da5da70b719e25917cf494b8dba76c53c34827b Author: Alexey Shvetsov gentoo org> AuthorDate: Thu Feb 1 12:33:06 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Thu Feb 1 13:02:16 2024 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=6da5da70 media-gfx/libbgcode: new package, add 0.0.20231116 Signed-off-by: Alexey Shvetsov gentoo.org> media-gfx/libbgcode/Manifest | 1 + media-gfx/libbgcode/libbgcode-0.0.20231116.ebuild | 27 +++ media-gfx/libbgcode/metadata.xml | 16 ++ 3 files changed, 44 insertions(+) diff --git a/media-gfx/libbgcode/Manifest b/media-gfx/libbgcode/Manifest new file mode 100644 index ..edb43024b6f7 --- /dev/null +++ b/media-gfx/libbgcode/Manifest @@ -0,0 +1 @@ +DIST libbgcode-0.0.20231116.tar.gz 455134 BLAKE2B 63c37b7a8189ef5f14539d6e32cc442b91e65a8e0047c1d7cc2b6970a31b2aa02c212c7ed7dec4497392755d64550a28652b04746eaef279d4fb4a8ec58aac12 SHA512 605110a0e4ca16fd497dbe8b15f9794a75c19d5d5367320ddacaa621eb1a4370fcc5b8a799440d8b449774595c5bcbcd2d96fcb574707da475ef85764f9760d3 diff --git a/media-gfx/libbgcode/libbgcode-0.0.20231116.ebuild b/media-gfx/libbgcode/libbgcode-0.0.20231116.ebuild new file mode 100644 index ..c0cf7e5f4299 --- /dev/null +++ b/media-gfx/libbgcode/libbgcode-0.0.20231116.ebuild @@ -0,0 +1,27 @@ +# Copyright 2024 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +inherit cmake + +LIBBGCODE_COMMIT=bc390aab4427589a6402b4c7f65cf4d0a8f987ec + +DESCRIPTION="Prusa Block & Binary G-code reader / writer / converter" +HOMEPAGE="https://github.com/prusa3d/libbgcode"; +SRC_URI="https://github.com/prusa3d/libbgcode/archive/${LIBBGCODE_COMMIT}.tar.gz -> ${P}.tar.gz" + +LICENSE="AGPL-3" +SLOT="0" +KEYWORDS="~amd64 ~arm64 ~x86" + +DEPEND=" + >=dev-libs/boost-1.82 + >=dev-libs/heatshrink-0.4.1 + >=dev-cpp/catch-2.13:0 + =dev-python/pybind11-2.11 +" +RDEPEND="${DEPEND}" + +S="${WORKDIR}/${PN}-${LIBBGCODE_COMMIT}" diff --git a/media-gfx/libbgcode/metadata.xml b/media-gfx/libbgcode/metadata.xml new file mode 100644 index ..7850cbb64c43 --- /dev/null +++ b/media-gfx/libbgcode/metadata.xml @@ -0,0 +1,16 @@ + +https://www.gentoo.org/dtd/metadata.dtd";> + + + 3dpr...@gentoo.org + Gentoo 3D Printer Project + + + ale...@gentoo.org + Alexey Shvetsov + + + https://github.com/prusa3d/libbgcode/issues + prusa3d/libbgcode + +
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gromacs/
commit: bd6f2e88f2a58a354d576c20d96329a56c7e8d60 Author: Alexey Shvetsov gentoo org> AuthorDate: Thu Jan 25 17:30:51 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Thu Jan 25 17:31:15 2024 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=bd6f2e88 sci-chemistry/gromacs: add 2023.3 Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/gromacs/Manifest | 3 + sci-chemistry/gromacs/gromacs-2023.3.ebuild | 335 2 files changed, 338 insertions(+) diff --git a/sci-chemistry/gromacs/Manifest b/sci-chemistry/gromacs/Manifest index 1d234e910a7c..6a26873979d3 100644 --- a/sci-chemistry/gromacs/Manifest +++ b/sci-chemistry/gromacs/Manifest @@ -7,6 +7,7 @@ DIST gromacs-2022.5.tar.gz 40362776 BLAKE2B e77c96cd995fb6c8284bcf9728e2f95e2659 DIST gromacs-2022.6.tar.gz 40330705 BLAKE2B fdafbd5b2a92d6022dec3e79e961fef220f1eba42850916e7cb70ef459a8d9c6ebc8c1bbe3c105f5b23161dd5c552ec00505d7c0036649b782cf52c311498743 SHA512 91217394f534ca8f78f73189059712e1c2cd354b658722f23768b12748f7bfaf1a5e95227c5ed1b69c1a9b72c3174e9600a712c157ea2f27156387efb823dd67 DIST gromacs-2023.1.tar.gz 41934072 BLAKE2B 6d04642ba37a8563fafc10e0be83e33aab5ce25ef43ec2c9555e84328096bbe61426558a1433b086028f3c6637a5b3ae82241e67f206c0dd0b5254f5ec27ae4c SHA512 4bddbbc56f26487db9d35f371d65725289d1355dc4c295d32698499e05eb74e31d4db579fc1f665edb55a68b002bddacf37c0f05d3f970bc149990d434b1 DIST gromacs-2023.2.tar.gz 41930578 BLAKE2B ee115ba45711867ced4ad08cede0e87dffd7c4e7a45ff3ee0c06b2f46b0dec838e4b532e092ce3abd993e231ca7d517d9941b371fd6d9d64d581862dc67c449c SHA512 9bc17f310e6be6fd51b7c07bde0b58e8fa15085b2c073eb7bed0db917646586dee5d7cf9b4b178e9b4cedd40d4bcd967edcc4b26debaec6f4ca94399b13b9186 +DIST gromacs-2023.3.tar.gz 42071770 BLAKE2B dea0f6b0ccd67bfa4fc58c06bd3eda6d17a7f4b1c6746c2743860cf00ba514884a27140b65b7830ca340c233510ace1734ecc09e393be3e9761e31b9e4abfeb6 SHA512 016181be78887b0e31bc7fd124ac7c25c923c6bab1ffe43d3b4a744ae68203bb9d9f976c4c81bce344f4ea8e9d610ebd5b631b2202fcd6cfefd8c1ad0ebfe10d DIST gromacs-2024-rc.tar.gz 42467347 BLAKE2B ee9e8dd15f5fc4df267678689b2ee22beb1de0a16ed3c620063d25b3e9df2295415dccf03e9aac7b7834e0ccca4ca1aa9b6db68aacc63399f947ed6d40b0025d SHA512 fe2de756b5dfa4d64fd974e3ffd1af561edb6102e42f2443fe27d9c06e6c0ed3afcd31c38ecab4de253e531a1d8a546690e2231ba20a5bdd4bc204491dc1b4fc DIST manual-2018.8.pdf 10025023 BLAKE2B afb0a6e6a72d78df743fcb57e7c1716848589e571dd35167b957a9b407ca27978ccfb6cb9e0df9c9439b888f352501a00ba32281ed1e0b4193bd606f1d77152e SHA512 b1972f7ce965bfc9377542993c5943ea4868a8ed23a969d4203264746d6bea3a7a65c6379196ece37fd6d68ec7ec80f827bde87d1049284af7082759a124f1d5 DIST manual-2019.6.pdf 12702376 BLAKE2B c350127bc06a9eb3dee73da39037c84daeb89500e23cb131bd19a150bf60602d4dde7611e0c6f0f344af4093e96a899303dac71b4df56fd0c44c3a48a56606b7 SHA512 dfdff67c2c1c9ce1f1c236b7686c5331b0fe86951da6c98eddd6a3e748815e0be0a9653ae4318469fcdd913c4e7c355d64a997cc80b9d9fbe6282ef6d98e61eb @@ -17,6 +18,7 @@ DIST manual-2022.5.pdf 13081119 BLAKE2B 7a0ffd086d98527d42da4a22984d8351ad7861e3 DIST manual-2022.6.pdf 13081140 BLAKE2B e7ae3f23ddc076c295be2c464fe2177d6d6848d070ee5eba2b572e996ae08adead898ec6432b123802907f64983aa4d2e17426be8d540c48d12398a479519f9e SHA512 4724888b3c33c4fa4a035d5fb2f8c51496f67e1ee312676510d5ba74bc3cc1571e71e84464585b87ad0133e8e736343ae382bf8f7b556633f86a99560213d271 DIST manual-2023.1.pdf 13526498 BLAKE2B a9aabcb722954c9c83a8f5945c85e634b0b82ace8b9b077c3f2b9ff432ca71d3e2d5ca2dd52d6ce489d77d3d4ca7b41d75e5566205bb8855caa650fa2722e5ec SHA512 b6ca6c822ac5b3cbe3c84d8fd51d3ed465268c00bb5f96e2afa557d45f9c534b0de278f33a0fdf43080c9c619344b98cd71847e17b297a789eec4c8b42dea7b2 DIST manual-2023.2.pdf 13547562 BLAKE2B 17155c82d968003706f974e2fb513dced28987e4630c455674d4088dcb827136e2b7b66836a2bf7f9be472254c11ab4ec98cace1462e85a7a18b0f1eb1760781 SHA512 b8026422fb367bf58d6ddb727afe2f1b208c9abb4eb513d85d395a19a82a7fcf362390f4ae5718fa17b0aeb7bf2c90567f40913fdc3cfc51c63d3757ab5a4905 +DIST manual-2023.3.pdf 13565055 BLAKE2B 0332b5c4de863e9f33d7ae7404741ee8f7f503ee0d2dc723e9cc42e9fd3fb8fc74313b43589cbfc7127daec24b721ba79a3c53ff509e718992ccbde14889ea2f SHA512 144220f18bfab6fefec738a7af743bd01733a896c853963ce113354da05514941862412786f0e2183de77634b31b334814d42daae87a9009ec028ed87685 DIST manual-2024-rc.pdf 13645392 BLAKE2B 06456a805b7e85924c34d6b940d32e6e9eae1a117e50a02cfe2dd909e79968a69a78eca95ec765671ea30cdc74a1c6c9314dfa2cd8da50ef378f6f7c685e068f SHA512 b20eaea8d6fcd260018bbac76c33e4994f85bd470d6c111ced3b32f0ff805834c4c18020adfc643ec1cf7d10172b5a5a5f4ed404b912ddf25646d16f36e21d54 DIST regressiontests-2018.8.tar.gz 67855469 BLAKE2B 34c9b339f6229f483afbb5192ee6ba8b8f72d5c26907a853af9c53dfece0d88739e48f6b44b78d1c010f988f9385d077285300522164f533a5861e9dda879275 SHA512 3642389d27bd1942cd0f091c940ae97b197b94856a387fe581dc516b0d4169480f16551d4ba357f9282b3337d605c286d51dd38112ac87c826dda63490483
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gromacs/
commit: 2f6c32fed42079926f5ef3b70e3e6593b272dd23 Author: Alexey Shvetsov gentoo org> AuthorDate: Sat Jan 20 21:08:34 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Sat Jan 20 21:08:34 2024 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=2f6c32fe sci-chemistry/gromacs: add 2024_rc, drop 2024_beta Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/gromacs/Manifest | 6 +++--- .../gromacs/{gromacs-2024_beta.ebuild => gromacs-2024_rc.ebuild}| 0 2 files changed, 3 insertions(+), 3 deletions(-) diff --git a/sci-chemistry/gromacs/Manifest b/sci-chemistry/gromacs/Manifest index 1601c97d1e2a..1d234e910a7c 100644 --- a/sci-chemistry/gromacs/Manifest +++ b/sci-chemistry/gromacs/Manifest @@ -7,7 +7,7 @@ DIST gromacs-2022.5.tar.gz 40362776 BLAKE2B e77c96cd995fb6c8284bcf9728e2f95e2659 DIST gromacs-2022.6.tar.gz 40330705 BLAKE2B fdafbd5b2a92d6022dec3e79e961fef220f1eba42850916e7cb70ef459a8d9c6ebc8c1bbe3c105f5b23161dd5c552ec00505d7c0036649b782cf52c311498743 SHA512 91217394f534ca8f78f73189059712e1c2cd354b658722f23768b12748f7bfaf1a5e95227c5ed1b69c1a9b72c3174e9600a712c157ea2f27156387efb823dd67 DIST gromacs-2023.1.tar.gz 41934072 BLAKE2B 6d04642ba37a8563fafc10e0be83e33aab5ce25ef43ec2c9555e84328096bbe61426558a1433b086028f3c6637a5b3ae82241e67f206c0dd0b5254f5ec27ae4c SHA512 4bddbbc56f26487db9d35f371d65725289d1355dc4c295d32698499e05eb74e31d4db579fc1f665edb55a68b002bddacf37c0f05d3f970bc149990d434b1 DIST gromacs-2023.2.tar.gz 41930578 BLAKE2B ee115ba45711867ced4ad08cede0e87dffd7c4e7a45ff3ee0c06b2f46b0dec838e4b532e092ce3abd993e231ca7d517d9941b371fd6d9d64d581862dc67c449c SHA512 9bc17f310e6be6fd51b7c07bde0b58e8fa15085b2c073eb7bed0db917646586dee5d7cf9b4b178e9b4cedd40d4bcd967edcc4b26debaec6f4ca94399b13b9186 -DIST gromacs-2024-beta.tar.gz 43450821 BLAKE2B 76a88058bca3aa2e2d40a262c59016f006d8c1bf168564580f61fe94384c741d832892c07b57893b001ce5ac8dfc1f8b38a5608cf5b7c4e067d4d91c93fc14d8 SHA512 b96c18f44cff6941024e70b7b68a801272caf1fc8037668ac1d77dfbfc028e7ee0cf889a469a68a2e8440d810e4c55ef1de38164345ea393237af3f1b789fa7a +DIST gromacs-2024-rc.tar.gz 42467347 BLAKE2B ee9e8dd15f5fc4df267678689b2ee22beb1de0a16ed3c620063d25b3e9df2295415dccf03e9aac7b7834e0ccca4ca1aa9b6db68aacc63399f947ed6d40b0025d SHA512 fe2de756b5dfa4d64fd974e3ffd1af561edb6102e42f2443fe27d9c06e6c0ed3afcd31c38ecab4de253e531a1d8a546690e2231ba20a5bdd4bc204491dc1b4fc DIST manual-2018.8.pdf 10025023 BLAKE2B afb0a6e6a72d78df743fcb57e7c1716848589e571dd35167b957a9b407ca27978ccfb6cb9e0df9c9439b888f352501a00ba32281ed1e0b4193bd606f1d77152e SHA512 b1972f7ce965bfc9377542993c5943ea4868a8ed23a969d4203264746d6bea3a7a65c6379196ece37fd6d68ec7ec80f827bde87d1049284af7082759a124f1d5 DIST manual-2019.6.pdf 12702376 BLAKE2B c350127bc06a9eb3dee73da39037c84daeb89500e23cb131bd19a150bf60602d4dde7611e0c6f0f344af4093e96a899303dac71b4df56fd0c44c3a48a56606b7 SHA512 dfdff67c2c1c9ce1f1c236b7686c5331b0fe86951da6c98eddd6a3e748815e0be0a9653ae4318469fcdd913c4e7c355d64a997cc80b9d9fbe6282ef6d98e61eb DIST manual-2020.7.pdf 11850780 BLAKE2B 38594e87993badfbbcf47d6010a7f67d3c3426dab85e1462916b4d62be27b5764953f912cf2b71ee24877e0bfa27b3f74431da2da81b4977d58cb66b2cc795a3 SHA512 4f184f2c90e0bac01a48069cc546cd5b04fa5f543f90dd2d68c6d17be278152fd09456b6a6c5c8236f8fb85a174d6ec7a1c7b44d437b4e6fea5d0ada73cec0f6 @@ -17,7 +17,7 @@ DIST manual-2022.5.pdf 13081119 BLAKE2B 7a0ffd086d98527d42da4a22984d8351ad7861e3 DIST manual-2022.6.pdf 13081140 BLAKE2B e7ae3f23ddc076c295be2c464fe2177d6d6848d070ee5eba2b572e996ae08adead898ec6432b123802907f64983aa4d2e17426be8d540c48d12398a479519f9e SHA512 4724888b3c33c4fa4a035d5fb2f8c51496f67e1ee312676510d5ba74bc3cc1571e71e84464585b87ad0133e8e736343ae382bf8f7b556633f86a99560213d271 DIST manual-2023.1.pdf 13526498 BLAKE2B a9aabcb722954c9c83a8f5945c85e634b0b82ace8b9b077c3f2b9ff432ca71d3e2d5ca2dd52d6ce489d77d3d4ca7b41d75e5566205bb8855caa650fa2722e5ec SHA512 b6ca6c822ac5b3cbe3c84d8fd51d3ed465268c00bb5f96e2afa557d45f9c534b0de278f33a0fdf43080c9c619344b98cd71847e17b297a789eec4c8b42dea7b2 DIST manual-2023.2.pdf 13547562 BLAKE2B 17155c82d968003706f974e2fb513dced28987e4630c455674d4088dcb827136e2b7b66836a2bf7f9be472254c11ab4ec98cace1462e85a7a18b0f1eb1760781 SHA512 b8026422fb367bf58d6ddb727afe2f1b208c9abb4eb513d85d395a19a82a7fcf362390f4ae5718fa17b0aeb7bf2c90567f40913fdc3cfc51c63d3757ab5a4905 -DIST manual-2024-beta.pdf 13617069 BLAKE2B 143d934f9343c0ce30c1f3f7f34868c17993c167cf1360bf0e9491dbf0ad7d062a99c7c7c8284bb950169d36e5a182c7916fae0a0ea470ee94983a6da5cc3f33 SHA512 c1b924da57d15034d43f29db34efbd86ee1f12fe0d07f644e5e7e8bf80c7a1e687b955f84fb1c23cfbf6e21731cb0fe01ea9973ab8a873e193a0c8cfeba28d9d +DIST manual-2024-rc.pdf 13645392 BLAKE2B 06456a805b7e85924c34d6b940d32e6e9eae1a117e50a02cfe2dd909e79968a69a78eca95ec765671ea30cdc74a1c6c9314dfa2cd8da50ef378f6f7c685e
[gentoo-commits] repo/gentoo:master commit in: dev-embedded/platformio/
commit: 79cf27fdef3bbcf712263c11f8a0be2bd26ffddd Author: Alexey Shvetsov gentoo org> AuthorDate: Tue Jan 9 19:57:09 2024 + Commit: Alexey Shvetsov gentoo org> CommitDate: Tue Jan 9 19:57:09 2024 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=79cf27fd dev-embedded/platformio: add 6.1.11, drop 6.1.6-r2 Closes: https://bugs.gentoo.org/907336 Signed-off-by: Alexey Shvetsov gentoo.org> dev-embedded/platformio/Manifest | 2 +- .../{platformio-6.1.6-r2.ebuild => platformio-6.1.11.ebuild} | 10 +- 2 files changed, 6 insertions(+), 6 deletions(-) diff --git a/dev-embedded/platformio/Manifest b/dev-embedded/platformio/Manifest index f4ae6a7f0739..9434f03835b0 100644 --- a/dev-embedded/platformio/Manifest +++ b/dev-embedded/platformio/Manifest @@ -1 +1 @@ -DIST platformio-6.1.6.tar.gz 295288 BLAKE2B 4508f3eda25cbb2d2bad6881d7041a9bd8bb87b452564b3cabd58bec0506ca10e53b2552eee8ac1984cb429e5ea52c332d863f1c76a10b5106ab238e6506bb87 SHA512 879fbc759476118473d13375e4dcdbda901f48f5d0d9bb94bdd3ed09de2563603880b91d102e35eaf144e61cd457b132056e0a8293b762b3566a537f3b886078 +DIST platformio-6.1.11.gh.tar.gz 296333 BLAKE2B 17672b499eca9c828cd7c6ea6a4c8acea7287f42bb78d4fc5fbd11bb93175bb87d9c2d100270869bc99bc0db550b49c163555ddd8edb17b6b33ccc5f3623f768 SHA512 450e3d1dc3b9c8124b6254fbf0a05b207b834aa0661f083ee2915bde5064498b6d5af666ad851b737fa5627ed436db983e038f83ed0437a1e248749a0dcc99ba diff --git a/dev-embedded/platformio/platformio-6.1.6-r2.ebuild b/dev-embedded/platformio/platformio-6.1.11.ebuild similarity index 93% rename from dev-embedded/platformio/platformio-6.1.6-r2.ebuild rename to dev-embedded/platformio/platformio-6.1.11.ebuild index 5a870f66e445..98da137e5799 100644 --- a/dev-embedded/platformio/platformio-6.1.6-r2.ebuild +++ b/dev-embedded/platformio/platformio-6.1.11.ebuild @@ -1,17 +1,17 @@ -# Copyright 1999-2023 Gentoo Authors +# Copyright 1999-2024 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 EAPI=8 DISTUTILS_SINGLE_IMPL=1 DISTUTILS_USE_PEP517=setuptools -PYTHON_COMPAT=( python3_{9..11} ) +PYTHON_COMPAT=( python3_{10..12} ) inherit distutils-r1 udev DESCRIPTION="An open source ecosystem for IoT development" HOMEPAGE="https://platformio.org/"; -SRC_URI="https://github.com/platformio/platformio-core/archive/refs/tags/v${PV}.tar.gz -> ${P}.tar.gz" +SRC_URI="https://github.com/platformio/platformio-core/archive/refs/tags/v${PV}.tar.gz -> ${P}.gh.tar.gz" S="${WORKDIR}"/${PN}-core-${PV} LICENSE="BSD" @@ -29,11 +29,11 @@ RDEPEND=" =dev-python/zeroconf-0.37[${PYTHON_USEDEP}] =dev-python/requests-2*[${PYTHON_USEDEP}] - >=dev-python/semantic-version-2.9[${PYTHON_USEDEP}] + >=dev-python/semantic-version-2.10[${PYTHON_USEDEP}] =dev-python/pyelftools-0.27[${PYTHON_USEDEP}] + >=dev-python/pyelftools-0.30[${PYTHON_USEDEP}] =dev-python/starlette-0.21[${PYTHON_USEDEP}]
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gromacs/
commit: 53fa1e6acdefa7c210916e1405b3c4a10db80187 Author: Alexey Shvetsov gentoo org> AuthorDate: Fri Nov 24 21:38:49 2023 + Commit: Alexey Shvetsov gentoo org> CommitDate: Fri Nov 24 21:38:49 2023 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=53fa1e6a sci-chemistry/gromacs: add 2024_beta, 2024. Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/gromacs/Manifest | 3 + sci-chemistry/gromacs/gromacs-2024..ebuild | 335 + sci-chemistry/gromacs/gromacs-2024_beta.ebuild | 335 + 3 files changed, 673 insertions(+) diff --git a/sci-chemistry/gromacs/Manifest b/sci-chemistry/gromacs/Manifest index 807a9d5c7481..1601c97d1e2a 100644 --- a/sci-chemistry/gromacs/Manifest +++ b/sci-chemistry/gromacs/Manifest @@ -7,6 +7,7 @@ DIST gromacs-2022.5.tar.gz 40362776 BLAKE2B e77c96cd995fb6c8284bcf9728e2f95e2659 DIST gromacs-2022.6.tar.gz 40330705 BLAKE2B fdafbd5b2a92d6022dec3e79e961fef220f1eba42850916e7cb70ef459a8d9c6ebc8c1bbe3c105f5b23161dd5c552ec00505d7c0036649b782cf52c311498743 SHA512 91217394f534ca8f78f73189059712e1c2cd354b658722f23768b12748f7bfaf1a5e95227c5ed1b69c1a9b72c3174e9600a712c157ea2f27156387efb823dd67 DIST gromacs-2023.1.tar.gz 41934072 BLAKE2B 6d04642ba37a8563fafc10e0be83e33aab5ce25ef43ec2c9555e84328096bbe61426558a1433b086028f3c6637a5b3ae82241e67f206c0dd0b5254f5ec27ae4c SHA512 4bddbbc56f26487db9d35f371d65725289d1355dc4c295d32698499e05eb74e31d4db579fc1f665edb55a68b002bddacf37c0f05d3f970bc149990d434b1 DIST gromacs-2023.2.tar.gz 41930578 BLAKE2B ee115ba45711867ced4ad08cede0e87dffd7c4e7a45ff3ee0c06b2f46b0dec838e4b532e092ce3abd993e231ca7d517d9941b371fd6d9d64d581862dc67c449c SHA512 9bc17f310e6be6fd51b7c07bde0b58e8fa15085b2c073eb7bed0db917646586dee5d7cf9b4b178e9b4cedd40d4bcd967edcc4b26debaec6f4ca94399b13b9186 +DIST gromacs-2024-beta.tar.gz 43450821 BLAKE2B 76a88058bca3aa2e2d40a262c59016f006d8c1bf168564580f61fe94384c741d832892c07b57893b001ce5ac8dfc1f8b38a5608cf5b7c4e067d4d91c93fc14d8 SHA512 b96c18f44cff6941024e70b7b68a801272caf1fc8037668ac1d77dfbfc028e7ee0cf889a469a68a2e8440d810e4c55ef1de38164345ea393237af3f1b789fa7a DIST manual-2018.8.pdf 10025023 BLAKE2B afb0a6e6a72d78df743fcb57e7c1716848589e571dd35167b957a9b407ca27978ccfb6cb9e0df9c9439b888f352501a00ba32281ed1e0b4193bd606f1d77152e SHA512 b1972f7ce965bfc9377542993c5943ea4868a8ed23a969d4203264746d6bea3a7a65c6379196ece37fd6d68ec7ec80f827bde87d1049284af7082759a124f1d5 DIST manual-2019.6.pdf 12702376 BLAKE2B c350127bc06a9eb3dee73da39037c84daeb89500e23cb131bd19a150bf60602d4dde7611e0c6f0f344af4093e96a899303dac71b4df56fd0c44c3a48a56606b7 SHA512 dfdff67c2c1c9ce1f1c236b7686c5331b0fe86951da6c98eddd6a3e748815e0be0a9653ae4318469fcdd913c4e7c355d64a997cc80b9d9fbe6282ef6d98e61eb DIST manual-2020.7.pdf 11850780 BLAKE2B 38594e87993badfbbcf47d6010a7f67d3c3426dab85e1462916b4d62be27b5764953f912cf2b71ee24877e0bfa27b3f74431da2da81b4977d58cb66b2cc795a3 SHA512 4f184f2c90e0bac01a48069cc546cd5b04fa5f543f90dd2d68c6d17be278152fd09456b6a6c5c8236f8fb85a174d6ec7a1c7b44d437b4e6fea5d0ada73cec0f6 @@ -16,6 +17,7 @@ DIST manual-2022.5.pdf 13081119 BLAKE2B 7a0ffd086d98527d42da4a22984d8351ad7861e3 DIST manual-2022.6.pdf 13081140 BLAKE2B e7ae3f23ddc076c295be2c464fe2177d6d6848d070ee5eba2b572e996ae08adead898ec6432b123802907f64983aa4d2e17426be8d540c48d12398a479519f9e SHA512 4724888b3c33c4fa4a035d5fb2f8c51496f67e1ee312676510d5ba74bc3cc1571e71e84464585b87ad0133e8e736343ae382bf8f7b556633f86a99560213d271 DIST manual-2023.1.pdf 13526498 BLAKE2B a9aabcb722954c9c83a8f5945c85e634b0b82ace8b9b077c3f2b9ff432ca71d3e2d5ca2dd52d6ce489d77d3d4ca7b41d75e5566205bb8855caa650fa2722e5ec SHA512 b6ca6c822ac5b3cbe3c84d8fd51d3ed465268c00bb5f96e2afa557d45f9c534b0de278f33a0fdf43080c9c619344b98cd71847e17b297a789eec4c8b42dea7b2 DIST manual-2023.2.pdf 13547562 BLAKE2B 17155c82d968003706f974e2fb513dced28987e4630c455674d4088dcb827136e2b7b66836a2bf7f9be472254c11ab4ec98cace1462e85a7a18b0f1eb1760781 SHA512 b8026422fb367bf58d6ddb727afe2f1b208c9abb4eb513d85d395a19a82a7fcf362390f4ae5718fa17b0aeb7bf2c90567f40913fdc3cfc51c63d3757ab5a4905 +DIST manual-2024-beta.pdf 13617069 BLAKE2B 143d934f9343c0ce30c1f3f7f34868c17993c167cf1360bf0e9491dbf0ad7d062a99c7c7c8284bb950169d36e5a182c7916fae0a0ea470ee94983a6da5cc3f33 SHA512 c1b924da57d15034d43f29db34efbd86ee1f12fe0d07f644e5e7e8bf80c7a1e687b955f84fb1c23cfbf6e21731cb0fe01ea9973ab8a873e193a0c8cfeba28d9d DIST regressiontests-2018.8.tar.gz 67855469 BLAKE2B 34c9b339f6229f483afbb5192ee6ba8b8f72d5c26907a853af9c53dfece0d88739e48f6b44b78d1c010f988f9385d077285300522164f533a5861e9dda879275 SHA512 3642389d27bd1942cd0f091c940ae97b197b94856a387fe581dc516b0d4169480f16551d4ba357f9282b3337d605c286d51dd38112ac87c826dda634904836bb DIST regressiontests-2019.6.tar.gz 67643195 BLAKE2B 1e054e24b187946f7ea28090d4f20cf8e1d79a26253f57ba07d130e0773d8541b8a1552a38023d31a68ce8bc62d8e0af1d98609234bb3e7d3e6d567307ebb38
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gromacs/
commit: 6d101a5b09a91583109c2a6f6c2f90f6519987f5 Author: Alexey Shvetsov gentoo org> AuthorDate: Wed Nov 1 07:52:45 2023 + Commit: Alexey Shvetsov gentoo org> CommitDate: Wed Nov 1 07:52:45 2023 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=6d101a5b sci-chemistry/gromacs: enable py3.12 Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/gromacs/gromacs-2020.7-r1.ebuild | 2 +- sci-chemistry/gromacs/gromacs-2021.6.ebuild| 2 +- sci-chemistry/gromacs/gromacs-2021.7-r1.ebuild | 2 +- sci-chemistry/gromacs/gromacs-2022.5-r1.ebuild | 2 +- sci-chemistry/gromacs/gromacs-2022.6.ebuild| 2 +- sci-chemistry/gromacs/gromacs-2022..ebuild | 2 +- sci-chemistry/gromacs/gromacs-2023.1-r1.ebuild | 2 +- sci-chemistry/gromacs/gromacs-2023.2.ebuild| 2 +- sci-chemistry/gromacs/gromacs-2023..ebuild | 2 +- sci-chemistry/gromacs/gromacs-.ebuild | 2 +- 10 files changed, 10 insertions(+), 10 deletions(-) diff --git a/sci-chemistry/gromacs/gromacs-2020.7-r1.ebuild b/sci-chemistry/gromacs/gromacs-2020.7-r1.ebuild index 6d32f835a853..c82b858efd34 100644 --- a/sci-chemistry/gromacs/gromacs-2020.7-r1.ebuild +++ b/sci-chemistry/gromacs/gromacs-2020.7-r1.ebuild @@ -5,7 +5,7 @@ EAPI=8 CMAKE_MAKEFILE_GENERATOR="ninja" -PYTHON_COMPAT=( python3_{10..11} ) +PYTHON_COMPAT=( python3_{10..12} ) DISTUTILS_OPTIONAL=1 DISTUTILS_USE_PEP517=no diff --git a/sci-chemistry/gromacs/gromacs-2021.6.ebuild b/sci-chemistry/gromacs/gromacs-2021.6.ebuild index d2f4420183d2..ea9a704a03f6 100644 --- a/sci-chemistry/gromacs/gromacs-2021.6.ebuild +++ b/sci-chemistry/gromacs/gromacs-2021.6.ebuild @@ -5,7 +5,7 @@ EAPI=8 CMAKE_MAKEFILE_GENERATOR="ninja" -PYTHON_COMPAT=( python3_{10..11} ) +PYTHON_COMPAT=( python3_{10..12} ) DISTUTILS_OPTIONAL=1 DISTUTILS_USE_PEP517=no diff --git a/sci-chemistry/gromacs/gromacs-2021.7-r1.ebuild b/sci-chemistry/gromacs/gromacs-2021.7-r1.ebuild index 8d0e281a03be..8cdb0ae9c78e 100644 --- a/sci-chemistry/gromacs/gromacs-2021.7-r1.ebuild +++ b/sci-chemistry/gromacs/gromacs-2021.7-r1.ebuild @@ -5,7 +5,7 @@ EAPI=8 CMAKE_MAKEFILE_GENERATOR="ninja" -PYTHON_COMPAT=( python3_{10..11} ) +PYTHON_COMPAT=( python3_{10..12} ) DISTUTILS_OPTIONAL=1 DISTUTILS_USE_PEP517=no diff --git a/sci-chemistry/gromacs/gromacs-2022.5-r1.ebuild b/sci-chemistry/gromacs/gromacs-2022.5-r1.ebuild index ca6fbd98c22b..9a91a5cbac88 100644 --- a/sci-chemistry/gromacs/gromacs-2022.5-r1.ebuild +++ b/sci-chemistry/gromacs/gromacs-2022.5-r1.ebuild @@ -5,7 +5,7 @@ EAPI=8 CMAKE_MAKEFILE_GENERATOR="ninja" -PYTHON_COMPAT=( python3_{10..11} ) +PYTHON_COMPAT=( python3_{10..12} ) DISTUTILS_OPTIONAL=1 DISTUTILS_USE_PEP517=no diff --git a/sci-chemistry/gromacs/gromacs-2022.6.ebuild b/sci-chemistry/gromacs/gromacs-2022.6.ebuild index ca6fbd98c22b..9a91a5cbac88 100644 --- a/sci-chemistry/gromacs/gromacs-2022.6.ebuild +++ b/sci-chemistry/gromacs/gromacs-2022.6.ebuild @@ -5,7 +5,7 @@ EAPI=8 CMAKE_MAKEFILE_GENERATOR="ninja" -PYTHON_COMPAT=( python3_{10..11} ) +PYTHON_COMPAT=( python3_{10..12} ) DISTUTILS_OPTIONAL=1 DISTUTILS_USE_PEP517=no diff --git a/sci-chemistry/gromacs/gromacs-2022..ebuild b/sci-chemistry/gromacs/gromacs-2022..ebuild index ca6fbd98c22b..9a91a5cbac88 100644 --- a/sci-chemistry/gromacs/gromacs-2022..ebuild +++ b/sci-chemistry/gromacs/gromacs-2022..ebuild @@ -5,7 +5,7 @@ EAPI=8 CMAKE_MAKEFILE_GENERATOR="ninja" -PYTHON_COMPAT=( python3_{10..11} ) +PYTHON_COMPAT=( python3_{10..12} ) DISTUTILS_OPTIONAL=1 DISTUTILS_USE_PEP517=no diff --git a/sci-chemistry/gromacs/gromacs-2023.1-r1.ebuild b/sci-chemistry/gromacs/gromacs-2023.1-r1.ebuild index e052510b629f..92e8d1b21ec5 100644 --- a/sci-chemistry/gromacs/gromacs-2023.1-r1.ebuild +++ b/sci-chemistry/gromacs/gromacs-2023.1-r1.ebuild @@ -5,7 +5,7 @@ EAPI=8 CMAKE_MAKEFILE_GENERATOR="ninja" -PYTHON_COMPAT=( python3_{10..11} ) +PYTHON_COMPAT=( python3_{10..12} ) DISTUTILS_OPTIONAL=1 DISTUTILS_USE_PEP517=no diff --git a/sci-chemistry/gromacs/gromacs-2023.2.ebuild b/sci-chemistry/gromacs/gromacs-2023.2.ebuild index e052510b629f..92e8d1b21ec5 100644 --- a/sci-chemistry/gromacs/gromacs-2023.2.ebuild +++ b/sci-chemistry/gromacs/gromacs-2023.2.ebuild @@ -5,7 +5,7 @@ EAPI=8 CMAKE_MAKEFILE_GENERATOR="ninja" -PYTHON_COMPAT=( python3_{10..11} ) +PYTHON_COMPAT=( python3_{10..12} ) DISTUTILS_OPTIONAL=1 DISTUTILS_USE_PEP517=no diff --git a/sci-chemistry/gromacs/gromacs-2023..ebuild b/sci-chemistry/gromacs/gromacs-2023..ebuild index e052510b629f..92e8d1b21ec5 100644 --- a/sci-chemistry/gromacs/gromacs-2023..ebuild +++ b/sci-chemistry/gromacs/gromacs-2023..ebuild @@ -5,7 +5,7 @@ EAPI=8 CMAKE_MAKEFILE_GENERATOR="ninja" -PYTHON_COMPAT=( python3_{10..11} ) +PYTHON_COMPAT=( python3_{10..12} ) DISTUTILS_OPTIONAL=1 DISTUTILS_USE_PEP5
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gromacs/
commit: a976a11bf416436108dadba6b3ab7f50c069beeb Author: Alexey Shvetsov gentoo org> AuthorDate: Wed Nov 1 07:50:55 2023 + Commit: Alexey Shvetsov gentoo org> CommitDate: Wed Nov 1 07:50:55 2023 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=a976a11b sci-chemistry/gromacs: add quotes for ${HOME} Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/gromacs/gromacs-2020.7-r1.ebuild | 4 ++-- sci-chemistry/gromacs/gromacs-2021.6.ebuild| 4 ++-- sci-chemistry/gromacs/gromacs-2021.7-r1.ebuild | 4 ++-- sci-chemistry/gromacs/gromacs-2022.5-r1.ebuild | 4 ++-- sci-chemistry/gromacs/gromacs-2022.6.ebuild| 4 ++-- sci-chemistry/gromacs/gromacs-2022..ebuild | 4 ++-- sci-chemistry/gromacs/gromacs-2023.1-r1.ebuild | 4 ++-- sci-chemistry/gromacs/gromacs-2023.2.ebuild| 4 ++-- sci-chemistry/gromacs/gromacs-2023..ebuild | 4 ++-- sci-chemistry/gromacs/gromacs-.ebuild | 4 ++-- 10 files changed, 20 insertions(+), 20 deletions(-) diff --git a/sci-chemistry/gromacs/gromacs-2020.7-r1.ebuild b/sci-chemistry/gromacs/gromacs-2020.7-r1.ebuild index deddfa2607d8..6d32f835a853 100644 --- a/sci-chemistry/gromacs/gromacs-2020.7-r1.ebuild +++ b/sci-chemistry/gromacs/gromacs-2020.7-r1.ebuild @@ -138,8 +138,8 @@ src_prepare() { DOC_CONTENTS="Gromacs can use sci-chemistry/vmd to read additional file formats" if use build-manual; then # try to create policy for imagemagik - mkdir -p ${HOME}/.config/ImageMagick - cat >> ${HOME}/.config/ImageMagick/policy.xml <<- EOF + mkdir -p "${HOME}"/.config/ImageMagick + cat >> "${HOME}"/.config/ImageMagick/policy.xml <<- EOF diff --git a/sci-chemistry/gromacs/gromacs-2021.6.ebuild b/sci-chemistry/gromacs/gromacs-2021.6.ebuild index f22757c7a054..d2f4420183d2 100644 --- a/sci-chemistry/gromacs/gromacs-2021.6.ebuild +++ b/sci-chemistry/gromacs/gromacs-2021.6.ebuild @@ -138,8 +138,8 @@ src_prepare() { DOC_CONTENTS="Gromacs can use sci-chemistry/vmd to read additional file formats" if use build-manual; then # try to create policy for imagemagik - mkdir -p ${HOME}/.config/ImageMagick - cat >> ${HOME}/.config/ImageMagick/policy.xml <<- EOF + mkdir -p "${HOME}"/.config/ImageMagick + cat >> "${HOME}"/.config/ImageMagick/policy.xml <<- EOF diff --git a/sci-chemistry/gromacs/gromacs-2021.7-r1.ebuild b/sci-chemistry/gromacs/gromacs-2021.7-r1.ebuild index 63f1ff82b83b..8d0e281a03be 100644 --- a/sci-chemistry/gromacs/gromacs-2021.7-r1.ebuild +++ b/sci-chemistry/gromacs/gromacs-2021.7-r1.ebuild @@ -142,8 +142,8 @@ src_prepare() { DOC_CONTENTS="Gromacs can use sci-chemistry/vmd to read additional file formats" if use build-manual; then # try to create policy for imagemagik - mkdir -p ${HOME}/.config/ImageMagick - cat >> ${HOME}/.config/ImageMagick/policy.xml <<- EOF + mkdir -p "${HOME}"/.config/ImageMagick + cat >> "${HOME}"/.config/ImageMagick/policy.xml <<- EOF diff --git a/sci-chemistry/gromacs/gromacs-2022.5-r1.ebuild b/sci-chemistry/gromacs/gromacs-2022.5-r1.ebuild index 45b0137cb890..ca6fbd98c22b 100644 --- a/sci-chemistry/gromacs/gromacs-2022.5-r1.ebuild +++ b/sci-chemistry/gromacs/gromacs-2022.5-r1.ebuild @@ -149,8 +149,8 @@ src_prepare() { DOC_CONTENTS="Gromacs can use sci-chemistry/vmd to read additional file formats" if use build-manual; then # try to create policy for imagemagik - mkdir -p ${HOME}/.config/ImageMagick - cat >> ${HOME}/.config/ImageMagick/policy.xml <<- EOF + mkdir -p "${HOME}"/.config/ImageMagick + cat >> "${HOME}"/.config/ImageMagick/policy.xml <<- EOF diff --git a/sci-chemistry/gromacs/gromacs-2022.6.ebuild b/sci-chemistry/gromacs/gromacs-2022.6.ebuild index 45b0137cb890..ca6fbd98c22b 100644 --- a/sci-chemistry/gromacs/gromacs-2022.6.ebuild +++ b/sci-chemistry/gromacs/gromacs-2022.6.ebuild @@ -149,8 +149,8 @@ src_prepare() { DOC_CONTENTS="Gromacs can use sci-chemistry/vmd to read additional file formats" if use build-manual; then # try to create policy for imagemagik - mkdir -p ${HOME}/.config/ImageMagick - cat >> ${HOME}/.config/ImageMagick/policy.xml <<- EOF + mkdir -p "${HOME}"/.config/ImageMagick + cat >> "${HOME}"/.config/ImageMagick/policy.xml
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gromacs/
commit: 459d3befd5266a5a7d2c9ac2d38f18c2cc8041a9 Author: Alexey Shvetsov gentoo org> AuthorDate: Wed Nov 1 07:47:01 2023 + Commit: Alexey Shvetsov gentoo org> CommitDate: Wed Nov 1 07:47:01 2023 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=459d3bef sci-chemistry/gromacs: disable py3.9 Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/gromacs/gromacs-2020.7-r1.ebuild | 2 +- sci-chemistry/gromacs/gromacs-2021.6.ebuild| 2 +- sci-chemistry/gromacs/gromacs-2021.7-r1.ebuild | 2 +- sci-chemistry/gromacs/gromacs-2022.5-r1.ebuild | 2 +- sci-chemistry/gromacs/gromacs-2022.6.ebuild| 2 +- sci-chemistry/gromacs/gromacs-2022..ebuild | 2 +- sci-chemistry/gromacs/gromacs-2023.1-r1.ebuild | 2 +- sci-chemistry/gromacs/gromacs-2023.2.ebuild| 2 +- sci-chemistry/gromacs/gromacs-2023..ebuild | 2 +- sci-chemistry/gromacs/gromacs-.ebuild | 2 +- 10 files changed, 10 insertions(+), 10 deletions(-) diff --git a/sci-chemistry/gromacs/gromacs-2020.7-r1.ebuild b/sci-chemistry/gromacs/gromacs-2020.7-r1.ebuild index fa307d1e2a3a..deddfa2607d8 100644 --- a/sci-chemistry/gromacs/gromacs-2020.7-r1.ebuild +++ b/sci-chemistry/gromacs/gromacs-2020.7-r1.ebuild @@ -5,7 +5,7 @@ EAPI=8 CMAKE_MAKEFILE_GENERATOR="ninja" -PYTHON_COMPAT=( python3_{9..11} ) +PYTHON_COMPAT=( python3_{10..11} ) DISTUTILS_OPTIONAL=1 DISTUTILS_USE_PEP517=no diff --git a/sci-chemistry/gromacs/gromacs-2021.6.ebuild b/sci-chemistry/gromacs/gromacs-2021.6.ebuild index a81800552ba1..f22757c7a054 100644 --- a/sci-chemistry/gromacs/gromacs-2021.6.ebuild +++ b/sci-chemistry/gromacs/gromacs-2021.6.ebuild @@ -5,7 +5,7 @@ EAPI=8 CMAKE_MAKEFILE_GENERATOR="ninja" -PYTHON_COMPAT=( python3_{9..11} ) +PYTHON_COMPAT=( python3_{10..11} ) DISTUTILS_OPTIONAL=1 DISTUTILS_USE_PEP517=no diff --git a/sci-chemistry/gromacs/gromacs-2021.7-r1.ebuild b/sci-chemistry/gromacs/gromacs-2021.7-r1.ebuild index 54e14ae80f3a..63f1ff82b83b 100644 --- a/sci-chemistry/gromacs/gromacs-2021.7-r1.ebuild +++ b/sci-chemistry/gromacs/gromacs-2021.7-r1.ebuild @@ -5,7 +5,7 @@ EAPI=8 CMAKE_MAKEFILE_GENERATOR="ninja" -PYTHON_COMPAT=( python3_{9..11} ) +PYTHON_COMPAT=( python3_{10..11} ) DISTUTILS_OPTIONAL=1 DISTUTILS_USE_PEP517=no diff --git a/sci-chemistry/gromacs/gromacs-2022.5-r1.ebuild b/sci-chemistry/gromacs/gromacs-2022.5-r1.ebuild index 1f3dfd9ef14c..45b0137cb890 100644 --- a/sci-chemistry/gromacs/gromacs-2022.5-r1.ebuild +++ b/sci-chemistry/gromacs/gromacs-2022.5-r1.ebuild @@ -5,7 +5,7 @@ EAPI=8 CMAKE_MAKEFILE_GENERATOR="ninja" -PYTHON_COMPAT=( python3_{9..11} ) +PYTHON_COMPAT=( python3_{10..11} ) DISTUTILS_OPTIONAL=1 DISTUTILS_USE_PEP517=no diff --git a/sci-chemistry/gromacs/gromacs-2022.6.ebuild b/sci-chemistry/gromacs/gromacs-2022.6.ebuild index 1f3dfd9ef14c..45b0137cb890 100644 --- a/sci-chemistry/gromacs/gromacs-2022.6.ebuild +++ b/sci-chemistry/gromacs/gromacs-2022.6.ebuild @@ -5,7 +5,7 @@ EAPI=8 CMAKE_MAKEFILE_GENERATOR="ninja" -PYTHON_COMPAT=( python3_{9..11} ) +PYTHON_COMPAT=( python3_{10..11} ) DISTUTILS_OPTIONAL=1 DISTUTILS_USE_PEP517=no diff --git a/sci-chemistry/gromacs/gromacs-2022..ebuild b/sci-chemistry/gromacs/gromacs-2022..ebuild index 1f3dfd9ef14c..45b0137cb890 100644 --- a/sci-chemistry/gromacs/gromacs-2022..ebuild +++ b/sci-chemistry/gromacs/gromacs-2022..ebuild @@ -5,7 +5,7 @@ EAPI=8 CMAKE_MAKEFILE_GENERATOR="ninja" -PYTHON_COMPAT=( python3_{9..11} ) +PYTHON_COMPAT=( python3_{10..11} ) DISTUTILS_OPTIONAL=1 DISTUTILS_USE_PEP517=no diff --git a/sci-chemistry/gromacs/gromacs-2023.1-r1.ebuild b/sci-chemistry/gromacs/gromacs-2023.1-r1.ebuild index fa386437a224..6df45cd2e2cb 100644 --- a/sci-chemistry/gromacs/gromacs-2023.1-r1.ebuild +++ b/sci-chemistry/gromacs/gromacs-2023.1-r1.ebuild @@ -5,7 +5,7 @@ EAPI=8 CMAKE_MAKEFILE_GENERATOR="ninja" -PYTHON_COMPAT=( python3_{9..11} ) +PYTHON_COMPAT=( python3_{10..11} ) DISTUTILS_OPTIONAL=1 DISTUTILS_USE_PEP517=no diff --git a/sci-chemistry/gromacs/gromacs-2023.2.ebuild b/sci-chemistry/gromacs/gromacs-2023.2.ebuild index fa386437a224..6df45cd2e2cb 100644 --- a/sci-chemistry/gromacs/gromacs-2023.2.ebuild +++ b/sci-chemistry/gromacs/gromacs-2023.2.ebuild @@ -5,7 +5,7 @@ EAPI=8 CMAKE_MAKEFILE_GENERATOR="ninja" -PYTHON_COMPAT=( python3_{9..11} ) +PYTHON_COMPAT=( python3_{10..11} ) DISTUTILS_OPTIONAL=1 DISTUTILS_USE_PEP517=no diff --git a/sci-chemistry/gromacs/gromacs-2023..ebuild b/sci-chemistry/gromacs/gromacs-2023..ebuild index fa386437a224..6df45cd2e2cb 100644 --- a/sci-chemistry/gromacs/gromacs-2023..ebuild +++ b/sci-chemistry/gromacs/gromacs-2023..ebuild @@ -5,7 +5,7 @@ EAPI=8 CMAKE_MAKEFILE_GENERATOR="ninja" -PYTHON_COMPAT=( python3_{9..11} ) +PYTHON_COMPAT=( python3_{10..11} ) DISTUTILS_OPTIONAL=1 DISTUTILS_USE_PEP517=no diff -
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gromacs/
commit: 092428835790462155e3d9090a7d1103a59ca809 Author: Alexey Shvetsov gentoo org> AuthorDate: Wed Nov 1 07:38:49 2023 + Commit: Alexey Shvetsov gentoo org> CommitDate: Wed Nov 1 07:38:49 2023 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=09242883 sci-chemistry/gromacs: Fix urls Thanks to Andrey Alekseenko Closes: https://bugs.gentoo.org/910639 Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/gromacs/gromacs-2018.8-r2.ebuild | 2 +- sci-chemistry/gromacs/gromacs-2019.6-r3.ebuild | 2 +- sci-chemistry/gromacs/gromacs-2020.7-r1.ebuild | 6 +++--- sci-chemistry/gromacs/gromacs-2021.6.ebuild| 6 +++--- sci-chemistry/gromacs/gromacs-2021.7-r1.ebuild | 6 +++--- sci-chemistry/gromacs/gromacs-2022.5-r1.ebuild | 6 +++--- sci-chemistry/gromacs/gromacs-2022.6.ebuild| 6 +++--- sci-chemistry/gromacs/gromacs-2022..ebuild | 6 +++--- sci-chemistry/gromacs/gromacs-2023.1-r1.ebuild | 6 +++--- sci-chemistry/gromacs/gromacs-2023.2.ebuild| 6 +++--- sci-chemistry/gromacs/gromacs-2023..ebuild | 6 +++--- sci-chemistry/gromacs/gromacs-.ebuild | 6 +++--- 12 files changed, 32 insertions(+), 32 deletions(-) diff --git a/sci-chemistry/gromacs/gromacs-2018.8-r2.ebuild b/sci-chemistry/gromacs/gromacs-2018.8-r2.ebuild index 47be575cee41..47501a7b9111 100644 --- a/sci-chemistry/gromacs/gromacs-2018.8-r2.ebuild +++ b/sci-chemistry/gromacs/gromacs-2018.8-r2.ebuild @@ -231,7 +231,7 @@ src_install() { pkg_postinst() { einfo einfo "Please read and cite gromacs related papers from list:" - einfo "https://www.gromacs.org/Gromacs_papers"; + einfo "https://www.gromacs.org/articles.html"; einfo readme.gentoo_print_elog } diff --git a/sci-chemistry/gromacs/gromacs-2019.6-r3.ebuild b/sci-chemistry/gromacs/gromacs-2019.6-r3.ebuild index d984f873f939..23b83523b057 100644 --- a/sci-chemistry/gromacs/gromacs-2019.6-r3.ebuild +++ b/sci-chemistry/gromacs/gromacs-2019.6-r3.ebuild @@ -246,7 +246,7 @@ src_install() { pkg_postinst() { einfo einfo "Please read and cite gromacs related papers from list:" - einfo "https://www.gromacs.org/Gromacs_papers"; + einfo "https://www.gromacs.org/articles.html"; einfo readme.gentoo_print_elog } diff --git a/sci-chemistry/gromacs/gromacs-2020.7-r1.ebuild b/sci-chemistry/gromacs/gromacs-2020.7-r1.ebuild index 21bdf25bd343..fa307d1e2a3a 100644 --- a/sci-chemistry/gromacs/gromacs-2020.7-r1.ebuild +++ b/sci-chemistry/gromacs/gromacs-2020.7-r1.ebuild @@ -17,7 +17,7 @@ if [[ ${PV} = ** ]]; then EGIT_REPO_URI=" https://gitlab.com/gromacs/gromacs.git https://github.com/gromacs/gromacs.git - git://git.gromacs.org/gromacs.git" + " [[ ${PV} = ]] && EGIT_BRANCH="master" || EGIT_BRANCH="release-${PV:0:4}" inherit git-r3 else @@ -106,7 +106,7 @@ src_unpack() { else git-r3_src_unpack if use test; then - EGIT_REPO_URI="git://git.gromacs.org/regressiontests.git" \ + EGIT_REPO_URI="https://gitlab.com/gromacs/gromacs-regressiontests.git"; \ EGIT_BRANCH="${EGIT_BRANCH}" \ EGIT_CHECKOUT_DIR="${WORKDIR}/regressiontests"\ git-r3_src_unpack @@ -341,7 +341,7 @@ src_install() { pkg_postinst() { einfo einfo "Please read and cite gromacs related papers from list:" - einfo "https://www.gromacs.org/Gromacs_papers"; + einfo "https://www.gromacs.org/articles.html"; einfo readme.gentoo_print_elog } diff --git a/sci-chemistry/gromacs/gromacs-2021.6.ebuild b/sci-chemistry/gromacs/gromacs-2021.6.ebuild index b385c1a52f04..a81800552ba1 100644 --- a/sci-chemistry/gromacs/gromacs-2021.6.ebuild +++ b/sci-chemistry/gromacs/gromacs-2021.6.ebuild @@ -17,7 +17,7 @@ if [[ ${PV} = ** ]]; then EGIT_REPO_URI=" https://gitlab.com/gromacs/gromacs.git https://github.com/gromacs/gromacs.git - git://git.gromacs.org/gromacs.git" + " [[ ${PV} = ]] && EGIT_BRANCH="master" || EGIT_BRANCH="release-${PV:0:4}" inherit git-r3 else @@ -106,7 +106,7 @@ src_unpack() { else git-r3_src_unpack if use test; then - EGIT_REPO_URI="git://git.gromacs.org/regressiontests.git" \ + EGIT_REPO_URI="https://gitlab.com/gromacs/gromacs-regressiontests.git"; \ EGIT_BRANCH="${EGIT_BRANCH}" \ EGIT_CHECKOUT_DIR=&quo
[gentoo-commits] repo/gentoo:master commit in: media-gfx/prusaslicer/
commit: 864a3afe25cc83722526bd2cec62abe002c433af Author: Alexey Shvetsov gentoo org> AuthorDate: Tue Oct 24 20:58:23 2023 + Commit: Alexey Shvetsov gentoo org> CommitDate: Tue Oct 24 20:58:23 2023 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=864a3afe media-gfx/prusaslicer: add 2.6.1 Closes: https://bugs.gentoo.org/914756 Signed-off-by: Alexey Shvetsov gentoo.org> media-gfx/prusaslicer/Manifest | 1 + media-gfx/prusaslicer/prusaslicer-2.6.1.ebuild | 88 ++ 2 files changed, 89 insertions(+) diff --git a/media-gfx/prusaslicer/Manifest b/media-gfx/prusaslicer/Manifest index 967e72f1d40f..e0b6484d7d81 100644 --- a/media-gfx/prusaslicer/Manifest +++ b/media-gfx/prusaslicer/Manifest @@ -1,2 +1,3 @@ DIST prusaslicer-2.5.2.tar.gz 49039089 BLAKE2B f1489cac7f23977da30da130faab15336c0f31eee8f197804122e46e62e030a17baf97f744019673e3adc9aff7413380f5c0513fa3d9e3044d56c32d4c95e5b8 SHA512 7d17ce358f742ef44725b0b4160be3ddc522d2160d0b467589a1def82b2f478108e4934efb80feff043435b69fe7e81f18146277f67ec1819d9a0150fa9942a2 DIST prusaslicer-2.6.0.tar.gz 56430180 BLAKE2B 7d6a0344f558d5788676364262f9e2b878a01e199fa8c95cda87c801c84fd02d5fc9df5a16096d36ec2e02ea54c8189165d524d8e7f73f66526fba6e5c60e55b SHA512 c6133f09ccee5c3c6f1e6e3aebfee749fb0138e830d93ed42b19063b89738162095fa7c017695643b736099750bb56d6bd8174f8bf18a6f0703811703bfb508c +DIST prusaslicer-2.6.1.tar.gz 58479800 BLAKE2B d5bfe09a76c5e1e5d3f5fae350db27db61e1f90465db42b5573314c58d77c89d3c04e67b45c449374570b7c1a0ee13bf7984b011f751a71e3b1414759cc921e9 SHA512 2b04eeff4feca2afd560b2fb6a5bbdaae6cabed2180d1416f2e4c7c385a50f859ec334c864a737b7c09eb3fd88f80af68655a0ef25ce9216b16549b16b3020b0 diff --git a/media-gfx/prusaslicer/prusaslicer-2.6.1.ebuild b/media-gfx/prusaslicer/prusaslicer-2.6.1.ebuild new file mode 100644 index ..6661c356d72e --- /dev/null +++ b/media-gfx/prusaslicer/prusaslicer-2.6.1.ebuild @@ -0,0 +1,88 @@ +# Copyright 1999-2023 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +WX_GTK_VER="3.2-gtk3" +MY_PN="PrusaSlicer" +MY_PV="$(ver_rs 3 -)" + +inherit cmake wxwidgets xdg + +DESCRIPTION="A mesh slicer to generate G-code for fused-filament-fabrication (3D printers)" +HOMEPAGE="https://www.prusa3d.com/prusaslicer/"; +SRC_URI="https://github.com/prusa3d/PrusaSlicer/archive/refs/tags/version_${MY_PV}.tar.gz -> ${P}.tar.gz" + +LICENSE="AGPL-3 Boost-1.0 GPL-2 LGPL-3 MIT" +SLOT="0" +KEYWORDS="~amd64 ~arm64 ~x86" +IUSE="test" + +RESTRICT="test" + +RDEPEND=" + dev-cpp/eigen:3 + dev-cpp/tbb:= + dev-libs/boost:=[nls] + dev-libs/cereal + dev-libs/expat + dev-libs/glib:2 + dev-libs/gmp:= + dev-libs/mpfr:= + media-gfx/openvdb:= + net-misc/curl[adns] + media-libs/glew:0= + media-libs/libjpeg-turbo:= + media-libs/libpng:0= + media-libs/qhull:= + sci-libs/libigl + sci-libs/nlopt + sci-libs/opencascade:= + sci-mathematics/cgal:= + sys-apps/dbus + sys-libs/zlib:= + virtual/opengl + x11-libs/gtk+:3 + >=x11-libs/wxGTK-3.2.2.1-r3:${WX_GTK_VER}[X,opengl] + media-libs/nanosvg:= +" +DEPEND="${RDEPEND} + media-libs/qhull[static-libs] +" + +PATCHES=( + "${FILESDIR}/${PN}-2.6.0-libexpat-double-definition-fix.patch" + "${FILESDIR}/${PN}-2.6.0-disable-noisy-asserts.patch" + "${FILESDIR}/${PN}-2.6.0-dont-force-link-to-wayland-and-x11.patch" +) + +S="${WORKDIR}/${MY_PN}-version_${MY_PV}" + +src_prepare() { + sed -i -e 's/PrusaSlicer-${SLIC3R_VERSION}+UNKNOWN/PrusaSlicer-${SLIC3R_VERSION}+Gentoo/g' version.inc || die + + sed -i -e 's/find_package(OpenCASCADE 7.6.2 REQUIRED)/find_package(OpenCASCADE REQUIRED)/g' \ + src/occt_wrapper/CMakeLists.txt || die + cmake_src_prepare +} + +src_configure() { + CMAKE_BUILD_TYPE="Release" + + setup-wxwidgets + + local mycmakeargs=( + -DOPENVDB_FIND_MODULE_PATH="/usr/$(get_libdir)/cmake/OpenVDB" + + -DSLIC3R_BUILD_TESTS=$(usex test) + -DSLIC3R_FHS=ON + -DSLIC3R_GTK=3 + -DSLIC3R_GUI=ON + -DSLIC3R_PCH=OFF + -DSLIC3R_STATIC=OFF + -DSLIC3R_WX_STABLE=ON + -Wno-dev + ) + + cmake_src_configure +}
[gentoo-commits] repo/gentoo:master commit in: dev-python/pika/
commit: 699369ab69509a679fb48a682bcdba272dbae85c Author: Alexey Shvetsov gentoo org> AuthorDate: Sat Oct 14 06:24:33 2023 + Commit: Alexey Shvetsov gentoo org> CommitDate: Sat Oct 14 06:24:33 2023 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=699369ab dev-python/pika: add 1.3.2, drop 1.3.1 Closes: https://bugs.gentoo.org/906121 Signed-off-by: Alexey Shvetsov gentoo.org> dev-python/pika/Manifest | 2 +- dev-python/pika/{pika-1.3.1.ebuild => pika-1.3.2.ebuild} | 0 2 files changed, 1 insertion(+), 1 deletion(-) diff --git a/dev-python/pika/Manifest b/dev-python/pika/Manifest index b63cf1411ac3..257b429977e3 100644 --- a/dev-python/pika/Manifest +++ b/dev-python/pika/Manifest @@ -1 +1 @@ -DIST pika-1.3.1.gh.tar.gz 321628 BLAKE2B c473ec22dc20d0bdf87848b37dbca6d7c1a0581e23e89dbd6b7de382575133ae0c7db6ae505585297fd3253d948df35c74b801ff2a72c8e8cc5a53ddbfabcc48 SHA512 5b3b785f74cd11433198dfb9b423daae9f3acac6cee158638ac793d1bd575296d0d6425165f3f00338a65f89f48e1c2795725e7a4f791e815a5837b25c69ba46 +DIST pika-1.3.2.gh.tar.gz 323647 BLAKE2B 30cd1154bd35708a29a924d6f0f646ebdd3737745ba588e5d56fd2ae6b2a138005352475b346738b5eea66adadedb0c50fa9411f659c4f6c6b81bc9bf048c7fb SHA512 86c1c33db808274052cbe18af68bef685fafa260f692d16dcd3ce6259107c343ebdd3482713a7948583566581defa6037f3344d03b11c50458432d044d8b2057 diff --git a/dev-python/pika/pika-1.3.1.ebuild b/dev-python/pika/pika-1.3.2.ebuild similarity index 100% rename from dev-python/pika/pika-1.3.1.ebuild rename to dev-python/pika/pika-1.3.2.ebuild
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/MDAnalysis/
commit: 420e230bc8651f4c6dbc78a97fc9f6b9d26cf83c Author: Alexey Shvetsov gentoo org> AuthorDate: Sat Oct 14 06:17:11 2023 + Commit: Alexey Shvetsov gentoo org> CommitDate: Sat Oct 14 06:17:11 2023 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=420e230b sci-chemistry/MDAnalysis: add 2.6.1, drop 2.4.3 Signed-off-by: Alexey Shvetsov gentoo.org> .../MDAnalysis/{MDAnalysis-2.4.3.ebuild => MDAnalysis-2.6.1.ebuild} | 0 sci-chemistry/MDAnalysis/Manifest | 2 +- 2 files changed, 1 insertion(+), 1 deletion(-) diff --git a/sci-chemistry/MDAnalysis/MDAnalysis-2.4.3.ebuild b/sci-chemistry/MDAnalysis/MDAnalysis-2.6.1.ebuild similarity index 100% rename from sci-chemistry/MDAnalysis/MDAnalysis-2.4.3.ebuild rename to sci-chemistry/MDAnalysis/MDAnalysis-2.6.1.ebuild diff --git a/sci-chemistry/MDAnalysis/Manifest b/sci-chemistry/MDAnalysis/Manifest index b24016480d20..7a670797adfa 100644 --- a/sci-chemistry/MDAnalysis/Manifest +++ b/sci-chemistry/MDAnalysis/Manifest @@ -1 +1 @@ -DIST MDAnalysis-2.4.3.tar.gz 3747565 BLAKE2B 733be78aa3e57e8bbb9c291606a86d9100cb904cc587fa3e44c4205596b4da7eb5c2247388655dcd145b45ca6ecb47a3f95d7d659d029232d1febd2ebc99ab51 SHA512 0870bc392ef8b8fbae68cf60d1df2f5d413f4d1235ca795421061fd32a8fe97867d5bd610288237a59d1075f31cc43d281ab2f1e7e8bb0767dac7d278b8453d8 +DIST MDAnalysis-2.6.1.tar.gz 4173280 BLAKE2B 14aae62733ace3eff686f6ba6be8326f86ba24c55e3870aa2e5dd88a858ca0de8d89589a622687bec3aafd332d9ccb5d6e6166eb370f56eaf79af5081f3a003e SHA512 421a27e508bcf7845b0c91f40c01bba4a48bf8ba9a3d3ed50fe555336c96fb1f64bccc5cf3ee048130d2eef9b18b8550ed5f73d3459f8962343ba694d00655bb
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gromacs/
commit: ceb0349f3f4f0a40f6b279ffc6ffc3a6451d0398 Author: Alexey Shvetsov gentoo org> AuthorDate: Thu Jul 13 11:04:45 2023 + Commit: Alexey Shvetsov gentoo org> CommitDate: Thu Jul 13 11:04:45 2023 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=ceb0349f sci-chemistry/gromacs: add 2022.6 Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/gromacs/Manifest | 3 + sci-chemistry/gromacs/gromacs-2022.6.ebuild | 333 2 files changed, 336 insertions(+) diff --git a/sci-chemistry/gromacs/Manifest b/sci-chemistry/gromacs/Manifest index 978525436fff..2e715fb4bb10 100644 --- a/sci-chemistry/gromacs/Manifest +++ b/sci-chemistry/gromacs/Manifest @@ -4,6 +4,7 @@ DIST gromacs-2020.7.tar.gz 29175554 BLAKE2B 98f1aa415946f8eb113febc81105f0c1b091 DIST gromacs-2021.6.tar.gz 38012702 BLAKE2B 023ae37dc53643758afa050fd179cd66f3c6d6266f6afceee5eb35c890a3ae284956f2bc2409156d6e1fa03a7f23f7b04c27e1820547fd5f147b344d94da7d40 SHA512 65d7874e5cd838ce4f29d033c66304738ccc30f1987f9f8541725058b2fc4551302a399f6ce773e81ac9485963187c48feaf92c71789f4c345c82bd335f806a7 DIST gromacs-2021.7.tar.gz 38028032 BLAKE2B 2dc1b15ca8692ca5cf4ad1c7a266b9e2ced064d34a63cef61fea69e48231dd0310cfd8484d29c56cdb599f795d7655959f40038ac933b46ad2841d57bf2b3646 SHA512 ca478533da3bcb377fda30682660db8eb13beef6456fac6013a1a97ec3be60b5594567412e1e2a31392e484f9a40a22da1f12336f4738cf0422ff4f3e8814609 DIST gromacs-2022.5.tar.gz 40362776 BLAKE2B e77c96cd995fb6c8284bcf9728e2f95e265911f643c69d00cc5910c6d22ada41293a1cb74033e708957776551b253453f64dba46497d68b2f73c675e94f30ddd SHA512 79310d6fd39a160e7bbc661a04540c9bcb89f40c133d1031ca16998ef0a67fc4a023f57950b22793f0c91b5fe47fd78cb2e7afedb50fe9251b1c920c9267344d +DIST gromacs-2022.6.tar.gz 40330705 BLAKE2B fdafbd5b2a92d6022dec3e79e961fef220f1eba42850916e7cb70ef459a8d9c6ebc8c1bbe3c105f5b23161dd5c552ec00505d7c0036649b782cf52c311498743 SHA512 91217394f534ca8f78f73189059712e1c2cd354b658722f23768b12748f7bfaf1a5e95227c5ed1b69c1a9b72c3174e9600a712c157ea2f27156387efb823dd67 DIST gromacs-2023.1.tar.gz 41934072 BLAKE2B 6d04642ba37a8563fafc10e0be83e33aab5ce25ef43ec2c9555e84328096bbe61426558a1433b086028f3c6637a5b3ae82241e67f206c0dd0b5254f5ec27ae4c SHA512 4bddbbc56f26487db9d35f371d65725289d1355dc4c295d32698499e05eb74e31d4db579fc1f665edb55a68b002bddacf37c0f05d3f970bc149990d434b1 DIST manual-2018.8.pdf 10025023 BLAKE2B afb0a6e6a72d78df743fcb57e7c1716848589e571dd35167b957a9b407ca27978ccfb6cb9e0df9c9439b888f352501a00ba32281ed1e0b4193bd606f1d77152e SHA512 b1972f7ce965bfc9377542993c5943ea4868a8ed23a969d4203264746d6bea3a7a65c6379196ece37fd6d68ec7ec80f827bde87d1049284af7082759a124f1d5 DIST manual-2019.6.pdf 12702376 BLAKE2B c350127bc06a9eb3dee73da39037c84daeb89500e23cb131bd19a150bf60602d4dde7611e0c6f0f344af4093e96a899303dac71b4df56fd0c44c3a48a56606b7 SHA512 dfdff67c2c1c9ce1f1c236b7686c5331b0fe86951da6c98eddd6a3e748815e0be0a9653ae4318469fcdd913c4e7c355d64a997cc80b9d9fbe6282ef6d98e61eb @@ -11,6 +12,7 @@ DIST manual-2020.7.pdf 11850780 BLAKE2B 38594e87993badfbbcf47d6010a7f67d3c3426da DIST manual-2021.6.pdf 12256595 BLAKE2B 5d808e38571b38c1f6e0d115f6e604238206cc001f59d05ed855e80c324c0e6fd7767adb723b3d0edd1267ae5973a3b83b76bd04d2dc99769e6440600d8e2146 SHA512 64fe56422d7417f6f61b10346c99e24c3f423f0cedc3794e0809250282bc87ef692b47ae6c3f95ad7994aa3860ed82035cbacc76eb78a2f54a29052a05260af2 DIST manual-2021.7.pdf 12256526 BLAKE2B 6f298d7dac142f66914bbc2ea7d6ca70c4aeafaf33ccf12336d5cec64b1f1097b5332c767bb411ccef706ec6184479a84bcf59bda21c4249d45d8ce3dea08e79 SHA512 197765accb8ab6c5f1cc94b2697ff1817e157d85fa231dfe36a85036076e04da2a8035de66aba4f46c6dd7f553176357b94c92e1da5d1dabc574c627deee5279 DIST manual-2022.5.pdf 13081119 BLAKE2B 7a0ffd086d98527d42da4a22984d8351ad7861e32951e8b65c88e7d0df1559303750886ae31a7c158b4e22f616f6dd5deed9a63b0ed114bb1e0adfda9350a487 SHA512 707869ee6052f1b7f75376b0f78fcc4859035234957cc740bd770ea3bea3a591f7fc1fbc0b8526baab48eebfa506d03927df94ddc9c412c75dc2f2864574dd82 +DIST manual-2022.6.pdf 13081140 BLAKE2B e7ae3f23ddc076c295be2c464fe2177d6d6848d070ee5eba2b572e996ae08adead898ec6432b123802907f64983aa4d2e17426be8d540c48d12398a479519f9e SHA512 4724888b3c33c4fa4a035d5fb2f8c51496f67e1ee312676510d5ba74bc3cc1571e71e84464585b87ad0133e8e736343ae382bf8f7b556633f86a99560213d271 DIST manual-2023.1.pdf 13526498 BLAKE2B a9aabcb722954c9c83a8f5945c85e634b0b82ace8b9b077c3f2b9ff432ca71d3e2d5ca2dd52d6ce489d77d3d4ca7b41d75e5566205bb8855caa650fa2722e5ec SHA512 b6ca6c822ac5b3cbe3c84d8fd51d3ed465268c00bb5f96e2afa557d45f9c534b0de278f33a0fdf43080c9c619344b98cd71847e17b297a789eec4c8b42dea7b2 DIST regressiontests-2018.8.tar.gz 67855469 BLAKE2B 34c9b339f6229f483afbb5192ee6ba8b8f72d5c26907a853af9c53dfece0d88739e48f6b44b78d1c010f988f9385d077285300522164f533a5861e9dda879275 SHA512 3642389d27bd1942cd0f091c940ae97b197b94856a387fe581dc516b0d4169480f16551d4ba357f9282b3337d605c286d51dd38112ac87c826dda63490483
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gromacs/
commit: 271798ebe1576910d96885d1ffd981791d5f54f1 Author: Alexey Shvetsov gentoo org> AuthorDate: Thu Jul 13 11:05:18 2023 + Commit: Alexey Shvetsov gentoo org> CommitDate: Thu Jul 13 11:05:18 2023 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=271798eb sci-chemistry/gromacs: add 2023.2 Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/gromacs/Manifest | 3 + sci-chemistry/gromacs/gromacs-2023.2.ebuild | 335 2 files changed, 338 insertions(+) diff --git a/sci-chemistry/gromacs/Manifest b/sci-chemistry/gromacs/Manifest index 2e715fb4bb10..807a9d5c7481 100644 --- a/sci-chemistry/gromacs/Manifest +++ b/sci-chemistry/gromacs/Manifest @@ -6,6 +6,7 @@ DIST gromacs-2021.7.tar.gz 38028032 BLAKE2B 2dc1b15ca8692ca5cf4ad1c7a266b9e2ced0 DIST gromacs-2022.5.tar.gz 40362776 BLAKE2B e77c96cd995fb6c8284bcf9728e2f95e265911f643c69d00cc5910c6d22ada41293a1cb74033e708957776551b253453f64dba46497d68b2f73c675e94f30ddd SHA512 79310d6fd39a160e7bbc661a04540c9bcb89f40c133d1031ca16998ef0a67fc4a023f57950b22793f0c91b5fe47fd78cb2e7afedb50fe9251b1c920c9267344d DIST gromacs-2022.6.tar.gz 40330705 BLAKE2B fdafbd5b2a92d6022dec3e79e961fef220f1eba42850916e7cb70ef459a8d9c6ebc8c1bbe3c105f5b23161dd5c552ec00505d7c0036649b782cf52c311498743 SHA512 91217394f534ca8f78f73189059712e1c2cd354b658722f23768b12748f7bfaf1a5e95227c5ed1b69c1a9b72c3174e9600a712c157ea2f27156387efb823dd67 DIST gromacs-2023.1.tar.gz 41934072 BLAKE2B 6d04642ba37a8563fafc10e0be83e33aab5ce25ef43ec2c9555e84328096bbe61426558a1433b086028f3c6637a5b3ae82241e67f206c0dd0b5254f5ec27ae4c SHA512 4bddbbc56f26487db9d35f371d65725289d1355dc4c295d32698499e05eb74e31d4db579fc1f665edb55a68b002bddacf37c0f05d3f970bc149990d434b1 +DIST gromacs-2023.2.tar.gz 41930578 BLAKE2B ee115ba45711867ced4ad08cede0e87dffd7c4e7a45ff3ee0c06b2f46b0dec838e4b532e092ce3abd993e231ca7d517d9941b371fd6d9d64d581862dc67c449c SHA512 9bc17f310e6be6fd51b7c07bde0b58e8fa15085b2c073eb7bed0db917646586dee5d7cf9b4b178e9b4cedd40d4bcd967edcc4b26debaec6f4ca94399b13b9186 DIST manual-2018.8.pdf 10025023 BLAKE2B afb0a6e6a72d78df743fcb57e7c1716848589e571dd35167b957a9b407ca27978ccfb6cb9e0df9c9439b888f352501a00ba32281ed1e0b4193bd606f1d77152e SHA512 b1972f7ce965bfc9377542993c5943ea4868a8ed23a969d4203264746d6bea3a7a65c6379196ece37fd6d68ec7ec80f827bde87d1049284af7082759a124f1d5 DIST manual-2019.6.pdf 12702376 BLAKE2B c350127bc06a9eb3dee73da39037c84daeb89500e23cb131bd19a150bf60602d4dde7611e0c6f0f344af4093e96a899303dac71b4df56fd0c44c3a48a56606b7 SHA512 dfdff67c2c1c9ce1f1c236b7686c5331b0fe86951da6c98eddd6a3e748815e0be0a9653ae4318469fcdd913c4e7c355d64a997cc80b9d9fbe6282ef6d98e61eb DIST manual-2020.7.pdf 11850780 BLAKE2B 38594e87993badfbbcf47d6010a7f67d3c3426dab85e1462916b4d62be27b5764953f912cf2b71ee24877e0bfa27b3f74431da2da81b4977d58cb66b2cc795a3 SHA512 4f184f2c90e0bac01a48069cc546cd5b04fa5f543f90dd2d68c6d17be278152fd09456b6a6c5c8236f8fb85a174d6ec7a1c7b44d437b4e6fea5d0ada73cec0f6 @@ -14,6 +15,7 @@ DIST manual-2021.7.pdf 12256526 BLAKE2B 6f298d7dac142f66914bbc2ea7d6ca70c4aeafaf DIST manual-2022.5.pdf 13081119 BLAKE2B 7a0ffd086d98527d42da4a22984d8351ad7861e32951e8b65c88e7d0df1559303750886ae31a7c158b4e22f616f6dd5deed9a63b0ed114bb1e0adfda9350a487 SHA512 707869ee6052f1b7f75376b0f78fcc4859035234957cc740bd770ea3bea3a591f7fc1fbc0b8526baab48eebfa506d03927df94ddc9c412c75dc2f2864574dd82 DIST manual-2022.6.pdf 13081140 BLAKE2B e7ae3f23ddc076c295be2c464fe2177d6d6848d070ee5eba2b572e996ae08adead898ec6432b123802907f64983aa4d2e17426be8d540c48d12398a479519f9e SHA512 4724888b3c33c4fa4a035d5fb2f8c51496f67e1ee312676510d5ba74bc3cc1571e71e84464585b87ad0133e8e736343ae382bf8f7b556633f86a99560213d271 DIST manual-2023.1.pdf 13526498 BLAKE2B a9aabcb722954c9c83a8f5945c85e634b0b82ace8b9b077c3f2b9ff432ca71d3e2d5ca2dd52d6ce489d77d3d4ca7b41d75e5566205bb8855caa650fa2722e5ec SHA512 b6ca6c822ac5b3cbe3c84d8fd51d3ed465268c00bb5f96e2afa557d45f9c534b0de278f33a0fdf43080c9c619344b98cd71847e17b297a789eec4c8b42dea7b2 +DIST manual-2023.2.pdf 13547562 BLAKE2B 17155c82d968003706f974e2fb513dced28987e4630c455674d4088dcb827136e2b7b66836a2bf7f9be472254c11ab4ec98cace1462e85a7a18b0f1eb1760781 SHA512 b8026422fb367bf58d6ddb727afe2f1b208c9abb4eb513d85d395a19a82a7fcf362390f4ae5718fa17b0aeb7bf2c90567f40913fdc3cfc51c63d3757ab5a4905 DIST regressiontests-2018.8.tar.gz 67855469 BLAKE2B 34c9b339f6229f483afbb5192ee6ba8b8f72d5c26907a853af9c53dfece0d88739e48f6b44b78d1c010f988f9385d077285300522164f533a5861e9dda879275 SHA512 3642389d27bd1942cd0f091c940ae97b197b94856a387fe581dc516b0d4169480f16551d4ba357f9282b3337d605c286d51dd38112ac87c826dda634904836bb DIST regressiontests-2019.6.tar.gz 67643195 BLAKE2B 1e054e24b187946f7ea28090d4f20cf8e1d79a26253f57ba07d130e0773d8541b8a1552a38023d31a68ce8bc62d8e0af1d98609234bb3e7d3e6d567307ebb386 SHA512 eacf1c55b982515a305c29459fe80a7cd558a8481e5689962aa956148af542568b1d1ce59c6784ecb0afd4768c2b664afa21e12af2d89ae2b06b1ba
[gentoo-commits] repo/gentoo:master commit in: eclass/
commit: 0cfe2886deb604c98c24d541b1e468a1400b48de Author: Alexey Shvetsov gentoo org> AuthorDate: Mon Jul 3 11:34:27 2023 + Commit: Alexey Shvetsov gentoo org> CommitDate: Mon Jul 3 13:51:42 2023 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=0cfe2886 eclass/kernel-build.eclass: riscv also need dtbs Signed-off-by: Alexey Shvetsov gentoo.org> eclass/kernel-build.eclass | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/eclass/kernel-build.eclass b/eclass/kernel-build.eclass index 963e020b3746..2123f165846a 100644 --- a/eclass/kernel-build.eclass +++ b/eclass/kernel-build.eclass @@ -188,7 +188,7 @@ kernel-build_src_test() { debug-print-function ${FUNCNAME} "${@}" local targets=( modules_install ) # on arm or arm64 you also need dtb - if use arm || use arm64; then + if use arm || use arm64 || use riscv; then targets+=( dtbs_install ) fi @@ -216,7 +216,7 @@ kernel-build_src_install() { # on what kind of installkernel is installed local targets=( modules_install ) # on arm or arm64 you also need dtb - if use arm || use arm64; then + if use arm || use arm64 || use riscv; then targets+=( dtbs_install ) fi
[gentoo-commits] repo/gentoo:master commit in: eclass/
commit: 2a0dca499f38a1f9f6f16076231376dbb1be64aa Author: Alexey Shvetsov gentoo org> AuthorDate: Mon Jul 3 11:35:33 2023 + Commit: Alexey Shvetsov gentoo org> CommitDate: Mon Jul 3 13:51:48 2023 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=2a0dca49 eclass/kernel-build.eclass: should depend on dtc for arm* and riscv Signed-off-by: Alexey Shvetsov gentoo.org> eclass/kernel-build.eclass | 3 +++ 1 file changed, 3 insertions(+) diff --git a/eclass/kernel-build.eclass b/eclass/kernel-build.eclass index 2123f165846a..0c8eaf3c1cd5 100644 --- a/eclass/kernel-build.eclass +++ b/eclass/kernel-build.eclass @@ -39,6 +39,9 @@ BDEPEND=" sys-devel/flex virtual/libelf app-alternatives/yacc + arm? ( sys-apps/dtc ) + arm64? ( sys-apps/dtc ) + riscv? ( sys-apps/dtc ) " IUSE="+strip"
[gentoo-commits] repo/gentoo:master commit in: dev-python/sphinx-argparse/
commit: 8d3a79ce9688a74a4ca8b861212223794d213dff Author: Alexey Shvetsov gentoo org> AuthorDate: Wed Jun 28 14:30:56 2023 + Commit: Alexey Shvetsov gentoo org> CommitDate: Thu Jun 29 06:47:43 2023 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=8d3a79ce dev-python/sphinx-argparse: new package, add 0.4.0 Signed-off-by: Alexey Shvetsov gentoo.org> dev-python/sphinx-argparse/Manifest| 1 + dev-python/sphinx-argparse/metadata.xml| 12 .../sphinx-argparse/sphinx-argparse-0.4.0.ebuild | 22 ++ 3 files changed, 35 insertions(+) diff --git a/dev-python/sphinx-argparse/Manifest b/dev-python/sphinx-argparse/Manifest new file mode 100644 index ..78929c27d15f --- /dev/null +++ b/dev-python/sphinx-argparse/Manifest @@ -0,0 +1 @@ +DIST sphinx_argparse-0.4.0.tar.gz 15020 BLAKE2B 73118f56ff82d52f04066b9d500aebc77eb5a0fecd03fa69f382c0f2afc0cbffdd395da707cf37b59f039e93935f8d5c3fe0e0f7a2820d3b6509dd78b37b0d74 SHA512 b96050da6c02f87c54f9dc9146bed955e99258df740b467575a2b3e9919fa8c4c6d30a736dab24360086bfc0d7d09c4bc7a818700af2c7846eed3a3b99053d65 diff --git a/dev-python/sphinx-argparse/metadata.xml b/dev-python/sphinx-argparse/metadata.xml new file mode 100644 index ..34557e466493 --- /dev/null +++ b/dev-python/sphinx-argparse/metadata.xml @@ -0,0 +1,12 @@ + +http://www.gentoo.org/dtd/metadata.dtd";> + + + s...@gentoo.org + Gentoo Science Project + + + ashb/sphinx-argparse + sphinx-argparse + + diff --git a/dev-python/sphinx-argparse/sphinx-argparse-0.4.0.ebuild b/dev-python/sphinx-argparse/sphinx-argparse-0.4.0.ebuild new file mode 100644 index ..2b28e7ab59e5 --- /dev/null +++ b/dev-python/sphinx-argparse/sphinx-argparse-0.4.0.ebuild @@ -0,0 +1,22 @@ +# Copyright 2020-2023 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +PYTHON_COMPAT=( python3_{10..12} ) +DISTUTILS_USE_PEP517=poetry +inherit distutils-r1 pypi + +DESCRIPTION="Sphinx extension that automatically documents argparse commands and options" +HOMEPAGE="https://pypi.org/project/sphinx-argparse/"; + +LICENSE="MIT" +SLOT="0" +KEYWORDS="~amd64 ~arm64 ~x86" + +RDEPEND=" + dev-python/sphinx[${PYTHON_USEDEP}] + dev-python/commonmark[${PYTHON_USEDEP}] +" + +distutils_enable_tests pytest
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gromacs/
commit: ba63fa560b2a404744b3113ec03b9a4523ddf7a7 Author: Alexey Shvetsov gentoo org> AuthorDate: Wed Jun 28 14:32:03 2023 + Commit: Alexey Shvetsov gentoo org> CommitDate: Thu Jun 29 06:47:44 2023 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=ba63fa56 sci-chemistry/gromacs: Fix docs build for pdf manual Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/gromacs/gromacs-2023.1.ebuild| 4 sci-chemistry/gromacs/gromacs-2023..ebuild | 4 sci-chemistry/gromacs/gromacs-2023.ebuild | 4 sci-chemistry/gromacs/gromacs-.ebuild | 4 4 files changed, 16 insertions(+) diff --git a/sci-chemistry/gromacs/gromacs-2023.1.ebuild b/sci-chemistry/gromacs/gromacs-2023.1.ebuild index 98c909cdab48..f57ac5829eb7 100644 --- a/sci-chemistry/gromacs/gromacs-2023.1.ebuild +++ b/sci-chemistry/gromacs/gromacs-2023.1.ebuild @@ -61,6 +61,10 @@ BDEPEND="${CDEPEND} app-doc/doxygen $(python_gen_cond_dep ' dev-python/sphinx[${PYTHON_USEDEP}] + dev-python/sphinx-copybutton[${PYTHON_USEDEP}] + dev-python/sphinx-inline-tabs[${PYTHON_USEDEP}] + dev-python/sphinx-argparse[${PYTHON_USEDEP}] + dev-python/sphinxcontrib-autoprogram[${PYTHON_USEDEP}] ') media-gfx/mscgen media-gfx/graphviz diff --git a/sci-chemistry/gromacs/gromacs-2023..ebuild b/sci-chemistry/gromacs/gromacs-2023..ebuild index 98c909cdab48..f57ac5829eb7 100644 --- a/sci-chemistry/gromacs/gromacs-2023..ebuild +++ b/sci-chemistry/gromacs/gromacs-2023..ebuild @@ -61,6 +61,10 @@ BDEPEND="${CDEPEND} app-doc/doxygen $(python_gen_cond_dep ' dev-python/sphinx[${PYTHON_USEDEP}] + dev-python/sphinx-copybutton[${PYTHON_USEDEP}] + dev-python/sphinx-inline-tabs[${PYTHON_USEDEP}] + dev-python/sphinx-argparse[${PYTHON_USEDEP}] + dev-python/sphinxcontrib-autoprogram[${PYTHON_USEDEP}] ') media-gfx/mscgen media-gfx/graphviz diff --git a/sci-chemistry/gromacs/gromacs-2023.ebuild b/sci-chemistry/gromacs/gromacs-2023.ebuild index 98c909cdab48..f57ac5829eb7 100644 --- a/sci-chemistry/gromacs/gromacs-2023.ebuild +++ b/sci-chemistry/gromacs/gromacs-2023.ebuild @@ -61,6 +61,10 @@ BDEPEND="${CDEPEND} app-doc/doxygen $(python_gen_cond_dep ' dev-python/sphinx[${PYTHON_USEDEP}] + dev-python/sphinx-copybutton[${PYTHON_USEDEP}] + dev-python/sphinx-inline-tabs[${PYTHON_USEDEP}] + dev-python/sphinx-argparse[${PYTHON_USEDEP}] + dev-python/sphinxcontrib-autoprogram[${PYTHON_USEDEP}] ') media-gfx/mscgen media-gfx/graphviz diff --git a/sci-chemistry/gromacs/gromacs-.ebuild b/sci-chemistry/gromacs/gromacs-.ebuild index 98c909cdab48..f57ac5829eb7 100644 --- a/sci-chemistry/gromacs/gromacs-.ebuild +++ b/sci-chemistry/gromacs/gromacs-.ebuild @@ -61,6 +61,10 @@ BDEPEND="${CDEPEND} app-doc/doxygen $(python_gen_cond_dep ' dev-python/sphinx[${PYTHON_USEDEP}] + dev-python/sphinx-copybutton[${PYTHON_USEDEP}] + dev-python/sphinx-inline-tabs[${PYTHON_USEDEP}] + dev-python/sphinx-argparse[${PYTHON_USEDEP}] + dev-python/sphinxcontrib-autoprogram[${PYTHON_USEDEP}] ') media-gfx/mscgen media-gfx/graphviz
[gentoo-commits] repo/gentoo:master commit in: dev-python/sphinxcontrib-autoprogram/
commit: cedfe00e7ad394b149f2f5f9efb1b05f8e63228d Author: Alexey Shvetsov gentoo org> AuthorDate: Wed Jun 28 14:31:21 2023 + Commit: Alexey Shvetsov gentoo org> CommitDate: Thu Jun 29 06:47:44 2023 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=cedfe00e dev-python/sphinxcontrib-autoprogram: keyword 0.1.8 for ~arm64 Signed-off-by: Alexey Shvetsov gentoo.org> .../sphinxcontrib-autoprogram/sphinxcontrib-autoprogram-0.1.8.ebuild| 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/dev-python/sphinxcontrib-autoprogram/sphinxcontrib-autoprogram-0.1.8.ebuild b/dev-python/sphinxcontrib-autoprogram/sphinxcontrib-autoprogram-0.1.8.ebuild index db8164e96833..115a4f879a5d 100644 --- a/dev-python/sphinxcontrib-autoprogram/sphinxcontrib-autoprogram-0.1.8.ebuild +++ b/dev-python/sphinxcontrib-autoprogram/sphinxcontrib-autoprogram-0.1.8.ebuild @@ -17,7 +17,7 @@ HOMEPAGE=" LICENSE="BSD-2" SLOT="0" -KEYWORDS="~amd64 ~x86" +KEYWORDS="~amd64 ~arm64 ~x86" RDEPEND=" dev-python/sphinx[${PYTHON_USEDEP}]
[gentoo-commits] repo/gentoo:master commit in: dev-python/sphinx-copybutton/
commit: 752cf8b31a347959e9ad0d06e26fde7181f98c0c Author: Alexey Shvetsov gentoo org> AuthorDate: Wed Jun 28 14:29:16 2023 + Commit: Alexey Shvetsov gentoo org> CommitDate: Thu Jun 29 06:47:37 2023 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=752cf8b3 dev-python/sphinx-copybutton: new package, add 0.5.2 Signed-off-by: Alexey Shvetsov gentoo.org> dev-python/sphinx-copybutton/Manifest | 1 + dev-python/sphinx-copybutton/metadata.xml | 15 +++ .../sphinx-copybutton-0.5.2.ebuild | 22 ++ 3 files changed, 38 insertions(+) diff --git a/dev-python/sphinx-copybutton/Manifest b/dev-python/sphinx-copybutton/Manifest new file mode 100644 index ..2a1ecd3b7d6a --- /dev/null +++ b/dev-python/sphinx-copybutton/Manifest @@ -0,0 +1 @@ +DIST sphinx-copybutton-0.5.2.tar.gz 23039 BLAKE2B 5a440865610dbcfc8abc8a10c38832439d5f588a26a8641374cada3cc181a0ba2a19e62b287a296c1879f25342ce8aae1ade080126f837e5ad9291c152a30c6e SHA512 83f61526d8a20f70b0de63a5bad89ed4ae4f3cf5cd589f1a1e2e91f08f4d45a05acf780a4cf3703d4490ab93c9c9bb18c11d3170b8011c2254aab0334940ab2d diff --git a/dev-python/sphinx-copybutton/metadata.xml b/dev-python/sphinx-copybutton/metadata.xml new file mode 100644 index ..343dee9179fb --- /dev/null +++ b/dev-python/sphinx-copybutton/metadata.xml @@ -0,0 +1,15 @@ + +https://www.gentoo.org/dtd/metadata.dtd";> + + + ale...@gentoo.org + Alexey Shvetsov + + + + executablebooks/sphinx-copybutton + sphinx-copybutton + https://sphinx-copybutton.readthedocs.io + https://github.com/executablebooks/sphinx-copybutton/issues + + diff --git a/dev-python/sphinx-copybutton/sphinx-copybutton-0.5.2.ebuild b/dev-python/sphinx-copybutton/sphinx-copybutton-0.5.2.ebuild new file mode 100644 index ..297c59d28f0d --- /dev/null +++ b/dev-python/sphinx-copybutton/sphinx-copybutton-0.5.2.ebuild @@ -0,0 +1,22 @@ +# Copyright 2022-2023 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 +PYPI_NO_NORMALIZE=1 +DISTUTILS_USE_PEP517=setuptools +PYTHON_COMPAT=( python3_{10..12} ) + +inherit distutils-r1 pypi + +DESCRIPTION="A small sphinx extension to add a \"copy\" button to code blocks" +HOMEPAGE="https://pypi.org/project/sphinx-copybutton/"; + +LICENSE="MIT" +SLOT="0" +KEYWORDS="~amd64 ~arm64 ~x86" + +RDEPEND=" + >=dev-python/sphinx-6.0[${PYTHON_USEDEP}] +" + +distutils_enable_tests pytest
[gentoo-commits] repo/gentoo:master commit in: dev-python/sphinx-inline-tabs/
commit: a152a22d027b130282d8ab5efcd9baa046bf1d97 Author: Alexey Shvetsov gentoo org> AuthorDate: Wed Jun 28 14:30:31 2023 + Commit: Alexey Shvetsov gentoo org> CommitDate: Thu Jun 29 06:47:43 2023 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=a152a22d dev-python/sphinx-inline-tabs: new package, add 2023.4.21 Signed-off-by: Alexey Shvetsov gentoo.org> dev-python/sphinx-inline-tabs/Manifest | 1 + dev-python/sphinx-inline-tabs/metadata.xml | 15 +++ .../sphinx-inline-tabs-2023.4.21.ebuild | 21 + 3 files changed, 37 insertions(+) diff --git a/dev-python/sphinx-inline-tabs/Manifest b/dev-python/sphinx-inline-tabs/Manifest new file mode 100644 index ..d45863abca58 --- /dev/null +++ b/dev-python/sphinx-inline-tabs/Manifest @@ -0,0 +1 @@ +DIST sphinx_inline_tabs-2023.4.21.tar.gz 42664 BLAKE2B e7f00bb220a194d6aad2285af793b540233d3a4122c82c34c28d03e62fa463252dff7624470f3abf4e5cd9028c9abfabc0b663fc56acee809bcd10d1bc886038 SHA512 d5c856821ca3d2b251733fe200465679dc875d66719851f89b6e38fd1898e40a2bbc97975b6bbdb7bf769fb67038bbb8dd94282504adb0977c57e8d1cf3fde5c diff --git a/dev-python/sphinx-inline-tabs/metadata.xml b/dev-python/sphinx-inline-tabs/metadata.xml new file mode 100644 index ..aac31acf568d --- /dev/null +++ b/dev-python/sphinx-inline-tabs/metadata.xml @@ -0,0 +1,15 @@ + +https://www.gentoo.org/dtd/metadata.dtd";> + + + ale...@gentoo.org + Alexey Shvetsov + + + + pradyunsg/sphinx-inline-tabs + sphinx-inline-tabs + https://sphinx-inline-tabs.readthedocs.io + https://github.com/pradyunsg/sphinx-inline-tabs/issues + + diff --git a/dev-python/sphinx-inline-tabs/sphinx-inline-tabs-2023.4.21.ebuild b/dev-python/sphinx-inline-tabs/sphinx-inline-tabs-2023.4.21.ebuild new file mode 100644 index ..ad6169c8bad4 --- /dev/null +++ b/dev-python/sphinx-inline-tabs/sphinx-inline-tabs-2023.4.21.ebuild @@ -0,0 +1,21 @@ +# Copyright 2022-2023 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 +DISTUTILS_USE_PEP517=flit +PYTHON_COMPAT=( python3_{10..12} ) + +inherit distutils-r1 pypi + +DESCRIPTION="A sphinx extension for inline tabs" +HOMEPAGE="https://pypi.org/project/sphinx-inline-tabs/"; + +LICENSE="MIT" +SLOT="0" +KEYWORDS="~amd64 ~arm64 ~x86" + +RDEPEND=" + >=dev-python/sphinx-6.0[${PYTHON_USEDEP}] +" + +distutils_enable_tests pytest
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gromacs/files/, sci-chemistry/gromacs/
commit: dfb5e4969403efb9f58cfea999c35f09d613c1a3 Author: Alexey Shvetsov gentoo org> AuthorDate: Tue Apr 25 09:49:08 2023 + Commit: Alexey Shvetsov gentoo org> CommitDate: Tue Apr 25 09:50:01 2023 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=dfb5e496 sci-chemistry/gromacs: Fix build with cuda-12 Thanks to pacho gentoo.org for patch Closes: https://bugs.gentoo.org/900204 Signed-off-by: Alexey Shvetsov gentoo.org> .../files/gromacs-2021-cuda-detection.patch| 339 + sci-chemistry/gromacs/gromacs-2021.7.ebuild| 5 +- 2 files changed, 343 insertions(+), 1 deletion(-) diff --git a/sci-chemistry/gromacs/files/gromacs-2021-cuda-detection.patch b/sci-chemistry/gromacs/files/gromacs-2021-cuda-detection.patch new file mode 100644 index ..8b458e96cb53 --- /dev/null +++ b/sci-chemistry/gromacs/files/gromacs-2021-cuda-detection.patch @@ -0,0 +1,339 @@ +--- gromacs-2021.7/cmake/gmxManageNvccConfig.cmake 2023-01-31 12:45:45.0 +0100 gromacs-2022.5/cmake/gmxManageNvccConfig.cmake 2023-02-03 12:53:34.0 +0100 +@@ -1,11 +1,9 @@ + # + # This file is part of the GROMACS molecular simulation package. + # +-# Copyright (c) 2012,2013,2014,2015,2016 by the GROMACS development team. +-# Copyright (c) 2017,2018,2019,2020,2021, by the GROMACS development team, led by +-# Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl, +-# and including many others, as listed in the AUTHORS file in the +-# top-level source directory and at http://www.gromacs.org. ++# Copyright 2012- The GROMACS Authors ++# and the project initiators Erik Lindahl, Berk Hess and David van der Spoel. ++# Consult the AUTHORS/COPYING files and https://www.gromacs.org for details. + # + # GROMACS is free software; you can redistribute it and/or + # modify it under the terms of the GNU Lesser General Public License +@@ -19,7 +17,7 @@ + # + # You should have received a copy of the GNU Lesser General Public + # License along with GROMACS; if not, see +-# http://www.gnu.org/licenses, or write to the Free Software Foundation, ++# https://www.gnu.org/licenses, or write to the Free Software Foundation, + # Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. + # + # If you want to redistribute modifications to GROMACS, please +@@ -28,10 +26,10 @@ + # consider code for inclusion in the official distribution, but + # derived work must not be called official GROMACS. Details are found + # in the README & COPYING files - if they are missing, get the +-# official version at http://www.gromacs.org. ++# official version at https://www.gromacs.org. + # + # To help us fund GROMACS development, we humbly ask that you cite +-# the research papers on the package. Check out http://www.gromacs.org. ++# the research papers on the package. Check out https://www.gromacs.org. + + # Manage CUDA nvcc compilation configuration, try to be smart to ease the users' + # pain as much as possible: +@@ -51,7 +49,7 @@ + # glibc source shows that _FORCE_INLINES is only used in this string.h + # feature and performance of memcpy variants is unimportant for CUDA + # code in GROMACS. So this workaround is good enough to keep problems +-# away from users installing GROMACS. See Issue #1942. ++# away from users installing GROMACS. See Issue #1982. + function(work_around_glibc_2_23) + try_compile(IS_GLIBC_2_23_OR_HIGHER ${CMAKE_BINARY_DIR} ${CMAKE_SOURCE_DIR}/cmake/TestGlibcVersion.cpp) + if(IS_GLIBC_2_23_OR_HIGHER) +@@ -83,67 +81,158 @@ + mark_as_advanced(CUDA_HOST_COMPILER CUDA_HOST_COMPILER_OPTIONS) + endif() + ++# We would like to be helpful and reject the host compiler with a ++# clear error message at configure time, rather than let nvcc ++# later reject the host compiler as not supported when the first ++# CUDA source file is built. We've implemented that for current ++# nvcc running on Unix-like systems, but e.g. changes to nvcc ++# will further affect the limited portability of this checking ++# code. Set the CMake variable GMX_NVCC_WORKS on if you want to ++# bypass this check. ++if((_cuda_nvcc_executable_or_flags_changed OR CUDA_HOST_COMPILER_CHANGED OR NOT GMX_NVCC_WORKS) AND NOT WIN32) ++message(STATUS "Check for working NVCC/C++ compiler combination with nvcc '${CUDA_NVCC_EXECUTABLE}'") ++execute_process(COMMAND ${CUDA_NVCC_EXECUTABLE} --compiler-bindir=${CUDA_HOST_COMPILER} -c ${CUDA_NVCC_FLAGS} ${CUDA_NVCC_FLAGS_${_build_type}} ${CMAKE_SOURCE_DIR}/cmake/TestCUDA.cu ++RESULT_VARIABLE _cuda_test_res ++OUTPUT_VARIABLE _cuda_test_out ++ERROR_VARIABLE _cuda_test_err ++OUTPUT_STRIP_TRAILING_WHITESPACE) ++ ++if(${_cuda_test_res}) ++message(STATUS "Check for working NVCC/C compiler combination - broken") ++message(STATUS "${CUDA_NVCC_EXECUTABLE} standard output: '${_cuda_test_out}'
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gromacs/
commit: d3ecfd5fbefbd84f7a93df9bf87f68af38adee2f Author: Alexey Shvetsov gentoo org> AuthorDate: Tue Apr 25 09:39:59 2023 + Commit: Alexey Shvetsov gentoo org> CommitDate: Tue Apr 25 09:40:23 2023 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=d3ecfd5f sci-chemistry/gromacs: add 2023.1 Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/gromacs/Manifest | 3 + sci-chemistry/gromacs/gromacs-2023.1.ebuild | 331 2 files changed, 334 insertions(+) diff --git a/sci-chemistry/gromacs/Manifest b/sci-chemistry/gromacs/Manifest index c0a2d0f2ab58..6b7f7795 100644 --- a/sci-chemistry/gromacs/Manifest +++ b/sci-chemistry/gromacs/Manifest @@ -5,6 +5,7 @@ DIST gromacs-2021.6.tar.gz 38012702 BLAKE2B 023ae37dc53643758afa050fd179cd66f3c6 DIST gromacs-2021.7.tar.gz 38028032 BLAKE2B 2dc1b15ca8692ca5cf4ad1c7a266b9e2ced064d34a63cef61fea69e48231dd0310cfd8484d29c56cdb599f795d7655959f40038ac933b46ad2841d57bf2b3646 SHA512 ca478533da3bcb377fda30682660db8eb13beef6456fac6013a1a97ec3be60b5594567412e1e2a31392e484f9a40a22da1f12336f4738cf0422ff4f3e8814609 DIST gromacs-2022.4.tar.gz 40352282 BLAKE2B 616ba05a70a483d7d8fadefb383ac9fc8825ac09ea92f55a0222c57ac91e4a045fb55405ec963303d8dbabb04b3d1f8c73062785b3812b3c6b7582e002dc5538 SHA512 15c642f2b63c1731a01a3b58c13d454f57c29607554a6693c2e62f38da574c6d596c5cb6f361e0feb5e1069b3b19bb49ceaa432c030da91f48e41654e3e6a62f DIST gromacs-2022.5.tar.gz 40362776 BLAKE2B e77c96cd995fb6c8284bcf9728e2f95e265911f643c69d00cc5910c6d22ada41293a1cb74033e708957776551b253453f64dba46497d68b2f73c675e94f30ddd SHA512 79310d6fd39a160e7bbc661a04540c9bcb89f40c133d1031ca16998ef0a67fc4a023f57950b22793f0c91b5fe47fd78cb2e7afedb50fe9251b1c920c9267344d +DIST gromacs-2023.1.tar.gz 41934072 BLAKE2B 6d04642ba37a8563fafc10e0be83e33aab5ce25ef43ec2c9555e84328096bbe61426558a1433b086028f3c6637a5b3ae82241e67f206c0dd0b5254f5ec27ae4c SHA512 4bddbbc56f26487db9d35f371d65725289d1355dc4c295d32698499e05eb74e31d4db579fc1f665edb55a68b002bddacf37c0f05d3f970bc149990d434b1 DIST gromacs-2023.tar.gz 41863526 BLAKE2B 81669eaf176e48855e168da81f410f949851a5b7d1fde43ee367f4bbaeef4a61b963e7c936c8a07d0eb51ad0e412e2826c6dd194c1df6d3ba39490decdf9fb21 SHA512 4593a0802d809ea797c3d3ba157851c279e9569e96c3aefa2dbcf97b5a1a74cd9840f0fcf0f032f49024691458941efb43e59e4e05c7ee44ee46d6b3621e52d5 DIST manual-2018.8.pdf 10025023 BLAKE2B afb0a6e6a72d78df743fcb57e7c1716848589e571dd35167b957a9b407ca27978ccfb6cb9e0df9c9439b888f352501a00ba32281ed1e0b4193bd606f1d77152e SHA512 b1972f7ce965bfc9377542993c5943ea4868a8ed23a969d4203264746d6bea3a7a65c6379196ece37fd6d68ec7ec80f827bde87d1049284af7082759a124f1d5 DIST manual-2019.6.pdf 12702376 BLAKE2B c350127bc06a9eb3dee73da39037c84daeb89500e23cb131bd19a150bf60602d4dde7611e0c6f0f344af4093e96a899303dac71b4df56fd0c44c3a48a56606b7 SHA512 dfdff67c2c1c9ce1f1c236b7686c5331b0fe86951da6c98eddd6a3e748815e0be0a9653ae4318469fcdd913c4e7c355d64a997cc80b9d9fbe6282ef6d98e61eb @@ -13,6 +14,7 @@ DIST manual-2021.6.pdf 12256595 BLAKE2B 5d808e38571b38c1f6e0d115f6e604238206cc00 DIST manual-2021.7.pdf 12256526 BLAKE2B 6f298d7dac142f66914bbc2ea7d6ca70c4aeafaf33ccf12336d5cec64b1f1097b5332c767bb411ccef706ec6184479a84bcf59bda21c4249d45d8ce3dea08e79 SHA512 197765accb8ab6c5f1cc94b2697ff1817e157d85fa231dfe36a85036076e04da2a8035de66aba4f46c6dd7f553176357b94c92e1da5d1dabc574c627deee5279 DIST manual-2022.4.pdf 13080976 BLAKE2B 45685fa1d727aa30425e946ac72e0bd723528032e3fb45525d3c025316ee2682ea3c9cc2fd75b5cd4e900adbc6e7f577e3368d9e0681294fd1515df3d2e5d840 SHA512 a7ac3a80a90f14b6917e15633d77230d24cdcf19ade38d14b35c6451074848a7754b33c612e2a26a657f2edd3d6710e5a8130cacb107d4085d1bd934267ad623 DIST manual-2022.5.pdf 13081119 BLAKE2B 7a0ffd086d98527d42da4a22984d8351ad7861e32951e8b65c88e7d0df1559303750886ae31a7c158b4e22f616f6dd5deed9a63b0ed114bb1e0adfda9350a487 SHA512 707869ee6052f1b7f75376b0f78fcc4859035234957cc740bd770ea3bea3a591f7fc1fbc0b8526baab48eebfa506d03927df94ddc9c412c75dc2f2864574dd82 +DIST manual-2023.1.pdf 13526498 BLAKE2B a9aabcb722954c9c83a8f5945c85e634b0b82ace8b9b077c3f2b9ff432ca71d3e2d5ca2dd52d6ce489d77d3d4ca7b41d75e5566205bb8855caa650fa2722e5ec SHA512 b6ca6c822ac5b3cbe3c84d8fd51d3ed465268c00bb5f96e2afa557d45f9c534b0de278f33a0fdf43080c9c619344b98cd71847e17b297a789eec4c8b42dea7b2 DIST manual-2023.pdf 13516908 BLAKE2B 03a62190921c1a5ddf1ce6b0af5f8d83eaea26d31ac9b7e2f59f8b08e350d7147ee03ff8ec4e81e43777d04fa3d91c96d2a3dc8daa53a2565df02c39d6897d06 SHA512 2b16ca234941ede6415f89e0e31ee611ea1324454f5ddaf3cbcbdfbb5e864344faf012e5106131dcb9d3c1ffbbac358f1ea387166b1e45035e6427e344ff1964 DIST regressiontests-2018.8.tar.gz 67855469 BLAKE2B 34c9b339f6229f483afbb5192ee6ba8b8f72d5c26907a853af9c53dfece0d88739e48f6b44b78d1c010f988f9385d077285300522164f533a5861e9dda879275 SHA512 3642389d27bd1942cd0f091c940ae97b197b94856a387fe581dc516b0d4169480f16551d4ba357f9282b3337d605c286d51dd38112ac87c826dda63490483
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gromacs/
commit: 08ac5b379688b5e80a0d748fc1fb8f067d1610ba Author: Alexey Shvetsov gentoo org> AuthorDate: Tue Feb 14 07:32:59 2023 + Commit: Alexey Shvetsov gentoo org> CommitDate: Tue Feb 14 07:32:59 2023 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=08ac5b37 sci-chemistry/gromacs: add 2023, drop 2023_rc1 Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/gromacs/Manifest | 6 +++--- .../gromacs/{gromacs-2023_rc1.ebuild => gromacs-2023.ebuild}| 0 2 files changed, 3 insertions(+), 3 deletions(-) diff --git a/sci-chemistry/gromacs/Manifest b/sci-chemistry/gromacs/Manifest index 848758a7570d..c0a2d0f2ab58 100644 --- a/sci-chemistry/gromacs/Manifest +++ b/sci-chemistry/gromacs/Manifest @@ -5,7 +5,7 @@ DIST gromacs-2021.6.tar.gz 38012702 BLAKE2B 023ae37dc53643758afa050fd179cd66f3c6 DIST gromacs-2021.7.tar.gz 38028032 BLAKE2B 2dc1b15ca8692ca5cf4ad1c7a266b9e2ced064d34a63cef61fea69e48231dd0310cfd8484d29c56cdb599f795d7655959f40038ac933b46ad2841d57bf2b3646 SHA512 ca478533da3bcb377fda30682660db8eb13beef6456fac6013a1a97ec3be60b5594567412e1e2a31392e484f9a40a22da1f12336f4738cf0422ff4f3e8814609 DIST gromacs-2022.4.tar.gz 40352282 BLAKE2B 616ba05a70a483d7d8fadefb383ac9fc8825ac09ea92f55a0222c57ac91e4a045fb55405ec963303d8dbabb04b3d1f8c73062785b3812b3c6b7582e002dc5538 SHA512 15c642f2b63c1731a01a3b58c13d454f57c29607554a6693c2e62f38da574c6d596c5cb6f361e0feb5e1069b3b19bb49ceaa432c030da91f48e41654e3e6a62f DIST gromacs-2022.5.tar.gz 40362776 BLAKE2B e77c96cd995fb6c8284bcf9728e2f95e265911f643c69d00cc5910c6d22ada41293a1cb74033e708957776551b253453f64dba46497d68b2f73c675e94f30ddd SHA512 79310d6fd39a160e7bbc661a04540c9bcb89f40c133d1031ca16998ef0a67fc4a023f57950b22793f0c91b5fe47fd78cb2e7afedb50fe9251b1c920c9267344d -DIST gromacs-2023-rc1.tar.gz 41863824 BLAKE2B c365ccd83b8f271be8f1a515f4dc0ebd729ce43023e979a52046fc827e786f84f09de894af9b8da4f7ce6e06a1ae050e8ff387892f76787857327ce2bc397042 SHA512 7ab8158624e0c93c0f06bd7023b97012d80afa5e068cb4489e7e9700171a5a8f69ae042bf0256c78aaec527d9a1b88f5f2dce6c8c7d4f46a457b6a9568b70f45 +DIST gromacs-2023.tar.gz 41863526 BLAKE2B 81669eaf176e48855e168da81f410f949851a5b7d1fde43ee367f4bbaeef4a61b963e7c936c8a07d0eb51ad0e412e2826c6dd194c1df6d3ba39490decdf9fb21 SHA512 4593a0802d809ea797c3d3ba157851c279e9569e96c3aefa2dbcf97b5a1a74cd9840f0fcf0f032f49024691458941efb43e59e4e05c7ee44ee46d6b3621e52d5 DIST manual-2018.8.pdf 10025023 BLAKE2B afb0a6e6a72d78df743fcb57e7c1716848589e571dd35167b957a9b407ca27978ccfb6cb9e0df9c9439b888f352501a00ba32281ed1e0b4193bd606f1d77152e SHA512 b1972f7ce965bfc9377542993c5943ea4868a8ed23a969d4203264746d6bea3a7a65c6379196ece37fd6d68ec7ec80f827bde87d1049284af7082759a124f1d5 DIST manual-2019.6.pdf 12702376 BLAKE2B c350127bc06a9eb3dee73da39037c84daeb89500e23cb131bd19a150bf60602d4dde7611e0c6f0f344af4093e96a899303dac71b4df56fd0c44c3a48a56606b7 SHA512 dfdff67c2c1c9ce1f1c236b7686c5331b0fe86951da6c98eddd6a3e748815e0be0a9653ae4318469fcdd913c4e7c355d64a997cc80b9d9fbe6282ef6d98e61eb DIST manual-2020.7.pdf 11850780 BLAKE2B 38594e87993badfbbcf47d6010a7f67d3c3426dab85e1462916b4d62be27b5764953f912cf2b71ee24877e0bfa27b3f74431da2da81b4977d58cb66b2cc795a3 SHA512 4f184f2c90e0bac01a48069cc546cd5b04fa5f543f90dd2d68c6d17be278152fd09456b6a6c5c8236f8fb85a174d6ec7a1c7b44d437b4e6fea5d0ada73cec0f6 @@ -13,7 +13,7 @@ DIST manual-2021.6.pdf 12256595 BLAKE2B 5d808e38571b38c1f6e0d115f6e604238206cc00 DIST manual-2021.7.pdf 12256526 BLAKE2B 6f298d7dac142f66914bbc2ea7d6ca70c4aeafaf33ccf12336d5cec64b1f1097b5332c767bb411ccef706ec6184479a84bcf59bda21c4249d45d8ce3dea08e79 SHA512 197765accb8ab6c5f1cc94b2697ff1817e157d85fa231dfe36a85036076e04da2a8035de66aba4f46c6dd7f553176357b94c92e1da5d1dabc574c627deee5279 DIST manual-2022.4.pdf 13080976 BLAKE2B 45685fa1d727aa30425e946ac72e0bd723528032e3fb45525d3c025316ee2682ea3c9cc2fd75b5cd4e900adbc6e7f577e3368d9e0681294fd1515df3d2e5d840 SHA512 a7ac3a80a90f14b6917e15633d77230d24cdcf19ade38d14b35c6451074848a7754b33c612e2a26a657f2edd3d6710e5a8130cacb107d4085d1bd934267ad623 DIST manual-2022.5.pdf 13081119 BLAKE2B 7a0ffd086d98527d42da4a22984d8351ad7861e32951e8b65c88e7d0df1559303750886ae31a7c158b4e22f616f6dd5deed9a63b0ed114bb1e0adfda9350a487 SHA512 707869ee6052f1b7f75376b0f78fcc4859035234957cc740bd770ea3bea3a591f7fc1fbc0b8526baab48eebfa506d03927df94ddc9c412c75dc2f2864574dd82 -DIST manual-2023-rc1.pdf 13506754 BLAKE2B 9487753e788fa5b2d01255717769e0b01cf7adcb4ae99a1f37f4ad0f8acccfbf4eff0a4c76add63bc82bffdf844cf8dd1d858d15a6bacd6635ec3a3474e10f6f SHA512 f26df914402793c656a798847524c0b9207a4163bb36d6cb90740a699418719f7b124343b4886e50d92023c14f8c1e61e950c12b8e1e4702007e34677cd17ef2 +DIST manual-2023.pdf 13516908 BLAKE2B 03a62190921c1a5ddf1ce6b0af5f8d83eaea26d31ac9b7e2f59f8b08e350d7147ee03ff8ec4e81e43777d04fa3d91c96d2a3dc8daa53a2565df02c39d689
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gromacs/
commit: 70d6b78804802aebc1e50b6c16dfe3d0ba6aafe6 Author: Alexey Shvetsov gentoo org> AuthorDate: Tue Feb 14 07:32:16 2023 + Commit: Alexey Shvetsov gentoo org> CommitDate: Tue Feb 14 07:32:16 2023 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=70d6b788 sci-chemistry/gromacs: add 2022.5 Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/gromacs/Manifest | 3 + sci-chemistry/gromacs/gromacs-2022.5.ebuild | 333 2 files changed, 336 insertions(+) diff --git a/sci-chemistry/gromacs/Manifest b/sci-chemistry/gromacs/Manifest index 1e435c15c0f9..848758a7570d 100644 --- a/sci-chemistry/gromacs/Manifest +++ b/sci-chemistry/gromacs/Manifest @@ -4,6 +4,7 @@ DIST gromacs-2020.7.tar.gz 29175554 BLAKE2B 98f1aa415946f8eb113febc81105f0c1b091 DIST gromacs-2021.6.tar.gz 38012702 BLAKE2B 023ae37dc53643758afa050fd179cd66f3c6d6266f6afceee5eb35c890a3ae284956f2bc2409156d6e1fa03a7f23f7b04c27e1820547fd5f147b344d94da7d40 SHA512 65d7874e5cd838ce4f29d033c66304738ccc30f1987f9f8541725058b2fc4551302a399f6ce773e81ac9485963187c48feaf92c71789f4c345c82bd335f806a7 DIST gromacs-2021.7.tar.gz 38028032 BLAKE2B 2dc1b15ca8692ca5cf4ad1c7a266b9e2ced064d34a63cef61fea69e48231dd0310cfd8484d29c56cdb599f795d7655959f40038ac933b46ad2841d57bf2b3646 SHA512 ca478533da3bcb377fda30682660db8eb13beef6456fac6013a1a97ec3be60b5594567412e1e2a31392e484f9a40a22da1f12336f4738cf0422ff4f3e8814609 DIST gromacs-2022.4.tar.gz 40352282 BLAKE2B 616ba05a70a483d7d8fadefb383ac9fc8825ac09ea92f55a0222c57ac91e4a045fb55405ec963303d8dbabb04b3d1f8c73062785b3812b3c6b7582e002dc5538 SHA512 15c642f2b63c1731a01a3b58c13d454f57c29607554a6693c2e62f38da574c6d596c5cb6f361e0feb5e1069b3b19bb49ceaa432c030da91f48e41654e3e6a62f +DIST gromacs-2022.5.tar.gz 40362776 BLAKE2B e77c96cd995fb6c8284bcf9728e2f95e265911f643c69d00cc5910c6d22ada41293a1cb74033e708957776551b253453f64dba46497d68b2f73c675e94f30ddd SHA512 79310d6fd39a160e7bbc661a04540c9bcb89f40c133d1031ca16998ef0a67fc4a023f57950b22793f0c91b5fe47fd78cb2e7afedb50fe9251b1c920c9267344d DIST gromacs-2023-rc1.tar.gz 41863824 BLAKE2B c365ccd83b8f271be8f1a515f4dc0ebd729ce43023e979a52046fc827e786f84f09de894af9b8da4f7ce6e06a1ae050e8ff387892f76787857327ce2bc397042 SHA512 7ab8158624e0c93c0f06bd7023b97012d80afa5e068cb4489e7e9700171a5a8f69ae042bf0256c78aaec527d9a1b88f5f2dce6c8c7d4f46a457b6a9568b70f45 DIST manual-2018.8.pdf 10025023 BLAKE2B afb0a6e6a72d78df743fcb57e7c1716848589e571dd35167b957a9b407ca27978ccfb6cb9e0df9c9439b888f352501a00ba32281ed1e0b4193bd606f1d77152e SHA512 b1972f7ce965bfc9377542993c5943ea4868a8ed23a969d4203264746d6bea3a7a65c6379196ece37fd6d68ec7ec80f827bde87d1049284af7082759a124f1d5 DIST manual-2019.6.pdf 12702376 BLAKE2B c350127bc06a9eb3dee73da39037c84daeb89500e23cb131bd19a150bf60602d4dde7611e0c6f0f344af4093e96a899303dac71b4df56fd0c44c3a48a56606b7 SHA512 dfdff67c2c1c9ce1f1c236b7686c5331b0fe86951da6c98eddd6a3e748815e0be0a9653ae4318469fcdd913c4e7c355d64a997cc80b9d9fbe6282ef6d98e61eb @@ -11,6 +12,7 @@ DIST manual-2020.7.pdf 11850780 BLAKE2B 38594e87993badfbbcf47d6010a7f67d3c3426da DIST manual-2021.6.pdf 12256595 BLAKE2B 5d808e38571b38c1f6e0d115f6e604238206cc001f59d05ed855e80c324c0e6fd7767adb723b3d0edd1267ae5973a3b83b76bd04d2dc99769e6440600d8e2146 SHA512 64fe56422d7417f6f61b10346c99e24c3f423f0cedc3794e0809250282bc87ef692b47ae6c3f95ad7994aa3860ed82035cbacc76eb78a2f54a29052a05260af2 DIST manual-2021.7.pdf 12256526 BLAKE2B 6f298d7dac142f66914bbc2ea7d6ca70c4aeafaf33ccf12336d5cec64b1f1097b5332c767bb411ccef706ec6184479a84bcf59bda21c4249d45d8ce3dea08e79 SHA512 197765accb8ab6c5f1cc94b2697ff1817e157d85fa231dfe36a85036076e04da2a8035de66aba4f46c6dd7f553176357b94c92e1da5d1dabc574c627deee5279 DIST manual-2022.4.pdf 13080976 BLAKE2B 45685fa1d727aa30425e946ac72e0bd723528032e3fb45525d3c025316ee2682ea3c9cc2fd75b5cd4e900adbc6e7f577e3368d9e0681294fd1515df3d2e5d840 SHA512 a7ac3a80a90f14b6917e15633d77230d24cdcf19ade38d14b35c6451074848a7754b33c612e2a26a657f2edd3d6710e5a8130cacb107d4085d1bd934267ad623 +DIST manual-2022.5.pdf 13081119 BLAKE2B 7a0ffd086d98527d42da4a22984d8351ad7861e32951e8b65c88e7d0df1559303750886ae31a7c158b4e22f616f6dd5deed9a63b0ed114bb1e0adfda9350a487 SHA512 707869ee6052f1b7f75376b0f78fcc4859035234957cc740bd770ea3bea3a591f7fc1fbc0b8526baab48eebfa506d03927df94ddc9c412c75dc2f2864574dd82 DIST manual-2023-rc1.pdf 13506754 BLAKE2B 9487753e788fa5b2d01255717769e0b01cf7adcb4ae99a1f37f4ad0f8acccfbf4eff0a4c76add63bc82bffdf844cf8dd1d858d15a6bacd6635ec3a3474e10f6f SHA512 f26df914402793c656a798847524c0b9207a4163bb36d6cb90740a699418719f7b124343b4886e50d92023c14f8c1e61e950c12b8e1e4702007e34677cd17ef2 DIST regressiontests-2018.8.tar.gz 67855469 BLAKE2B 34c9b339f6229f483afbb5192ee6ba8b8f72d5c26907a853af9c53dfece0d88739e48f6b44b78d1c010f988f9385d077285300522164f533a5861e9dda879275 SHA512 3642389d27bd1942cd0f091c940ae97b197b94856a387fe581dc516b0d4169480f16551d4ba357f9282b3337d605c286d51dd38112ac87c826dda63490483
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gromacs/
commit: e2b04103178eaff510860c9261b786957b65bbf0 Author: Alexey Shvetsov gentoo org> AuthorDate: Thu Feb 2 08:47:00 2023 + Commit: Alexey Shvetsov gentoo org> CommitDate: Thu Feb 2 08:48:10 2023 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=e2b04103 sci-chemistry/gromacs: Revert changes related to wchar This reverts commit b26ca4509f03b1cbf969c0735fefc98e2da3f5aa. Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/gromacs/gromacs-2022.4.ebuild| 2 +- sci-chemistry/gromacs/gromacs-2022..ebuild | 2 +- sci-chemistry/gromacs/gromacs-2023..ebuild | 2 +- sci-chemistry/gromacs/gromacs-2023_rc1.ebuild | 2 +- sci-chemistry/gromacs/gromacs-.ebuild | 2 +- 5 files changed, 5 insertions(+), 5 deletions(-) diff --git a/sci-chemistry/gromacs/gromacs-2022.4.ebuild b/sci-chemistry/gromacs/gromacs-2022.4.ebuild index 57c7253f3cc6..ca908310a723 100644 --- a/sci-chemistry/gromacs/gromacs-2022.4.ebuild +++ b/sci-chemistry/gromacs/gromacs-2022.4.ebuild @@ -51,7 +51,7 @@ CDEPEND=" mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi[cxx] ) sci-libs/lmfit:= - >=dev-cpp/muParser-2.3.4:=[-wchar] + >=dev-cpp/muParser-2.3:= ${PYTHON_DEPS} " BDEPEND="${CDEPEND} diff --git a/sci-chemistry/gromacs/gromacs-2022..ebuild b/sci-chemistry/gromacs/gromacs-2022..ebuild index 57c7253f3cc6..ca908310a723 100644 --- a/sci-chemistry/gromacs/gromacs-2022..ebuild +++ b/sci-chemistry/gromacs/gromacs-2022..ebuild @@ -51,7 +51,7 @@ CDEPEND=" mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi[cxx] ) sci-libs/lmfit:= - >=dev-cpp/muParser-2.3.4:=[-wchar] + >=dev-cpp/muParser-2.3:= ${PYTHON_DEPS} " BDEPEND="${CDEPEND} diff --git a/sci-chemistry/gromacs/gromacs-2023..ebuild b/sci-chemistry/gromacs/gromacs-2023..ebuild index 168151504751..98c909cdab48 100644 --- a/sci-chemistry/gromacs/gromacs-2023..ebuild +++ b/sci-chemistry/gromacs/gromacs-2023..ebuild @@ -51,7 +51,7 @@ CDEPEND=" mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi[cxx] ) sci-libs/lmfit:= - >=dev-cpp/muParser-2.3.4:=[-wchar] + >=dev-cpp/muParser-2.3:= ${PYTHON_DEPS} " BDEPEND="${CDEPEND} diff --git a/sci-chemistry/gromacs/gromacs-2023_rc1.ebuild b/sci-chemistry/gromacs/gromacs-2023_rc1.ebuild index 168151504751..98c909cdab48 100644 --- a/sci-chemistry/gromacs/gromacs-2023_rc1.ebuild +++ b/sci-chemistry/gromacs/gromacs-2023_rc1.ebuild @@ -51,7 +51,7 @@ CDEPEND=" mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi[cxx] ) sci-libs/lmfit:= - >=dev-cpp/muParser-2.3.4:=[-wchar] + >=dev-cpp/muParser-2.3:= ${PYTHON_DEPS} " BDEPEND="${CDEPEND} diff --git a/sci-chemistry/gromacs/gromacs-.ebuild b/sci-chemistry/gromacs/gromacs-.ebuild index 168151504751..98c909cdab48 100644 --- a/sci-chemistry/gromacs/gromacs-.ebuild +++ b/sci-chemistry/gromacs/gromacs-.ebuild @@ -51,7 +51,7 @@ CDEPEND=" mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi[cxx] ) sci-libs/lmfit:= - >=dev-cpp/muParser-2.3.4:=[-wchar] + >=dev-cpp/muParser-2.3:= ${PYTHON_DEPS} " BDEPEND="${CDEPEND}
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gromacs/
commit: 5682bd8f736d4405383717b48c7b3630925fbc12 Author: Alexey Shvetsov gentoo org> AuthorDate: Thu Feb 2 08:45:21 2023 + Commit: Alexey Shvetsov gentoo org> CommitDate: Thu Feb 2 08:45:36 2023 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=5682bd8f sci-chemistry/gromacs: add 2021.7 Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/gromacs/Manifest | 3 + sci-chemistry/gromacs/gromacs-2021.7.ebuild | 352 2 files changed, 355 insertions(+) diff --git a/sci-chemistry/gromacs/Manifest b/sci-chemistry/gromacs/Manifest index 6166ff22c51f..1e435c15c0f9 100644 --- a/sci-chemistry/gromacs/Manifest +++ b/sci-chemistry/gromacs/Manifest @@ -2,17 +2,20 @@ DIST gromacs-2018.8.tar.gz 29913703 BLAKE2B 8780032305928067fbfe1559efe9eedc4d47 DIST gromacs-2019.6.tar.gz 33446147 BLAKE2B adc21fb6b841b06d499607f8c0166a673645ef5af0b40bd823d0fff5ea24397e6301c5e1e0070986ae1ce1deba8a42052b66da148b071c1e21f2fe3908fee275 SHA512 7c227a9539e5775d5d128ae9e872a24181d79cdcd2852b86453597987e8d7332ecec371da65d089f6e610c54aafbccc8824ce298743383dd6240719ebee692a8 DIST gromacs-2020.7.tar.gz 29175554 BLAKE2B 98f1aa415946f8eb113febc81105f0c1b0919b96fc3c55a0ab83bf3950ff509b81eade92e645adb0bc2b407df239e20cf3f19828b6e08616437c8693c1fddcc8 SHA512 1d375c44cec38445e56cea252623b5b6c565680268999d4b6c14d6dc38759a27227655b2d29efaab9f9115d3677b446cb555e11cddafa0dc10c4827caaa2477b DIST gromacs-2021.6.tar.gz 38012702 BLAKE2B 023ae37dc53643758afa050fd179cd66f3c6d6266f6afceee5eb35c890a3ae284956f2bc2409156d6e1fa03a7f23f7b04c27e1820547fd5f147b344d94da7d40 SHA512 65d7874e5cd838ce4f29d033c66304738ccc30f1987f9f8541725058b2fc4551302a399f6ce773e81ac9485963187c48feaf92c71789f4c345c82bd335f806a7 +DIST gromacs-2021.7.tar.gz 38028032 BLAKE2B 2dc1b15ca8692ca5cf4ad1c7a266b9e2ced064d34a63cef61fea69e48231dd0310cfd8484d29c56cdb599f795d7655959f40038ac933b46ad2841d57bf2b3646 SHA512 ca478533da3bcb377fda30682660db8eb13beef6456fac6013a1a97ec3be60b5594567412e1e2a31392e484f9a40a22da1f12336f4738cf0422ff4f3e8814609 DIST gromacs-2022.4.tar.gz 40352282 BLAKE2B 616ba05a70a483d7d8fadefb383ac9fc8825ac09ea92f55a0222c57ac91e4a045fb55405ec963303d8dbabb04b3d1f8c73062785b3812b3c6b7582e002dc5538 SHA512 15c642f2b63c1731a01a3b58c13d454f57c29607554a6693c2e62f38da574c6d596c5cb6f361e0feb5e1069b3b19bb49ceaa432c030da91f48e41654e3e6a62f DIST gromacs-2023-rc1.tar.gz 41863824 BLAKE2B c365ccd83b8f271be8f1a515f4dc0ebd729ce43023e979a52046fc827e786f84f09de894af9b8da4f7ce6e06a1ae050e8ff387892f76787857327ce2bc397042 SHA512 7ab8158624e0c93c0f06bd7023b97012d80afa5e068cb4489e7e9700171a5a8f69ae042bf0256c78aaec527d9a1b88f5f2dce6c8c7d4f46a457b6a9568b70f45 DIST manual-2018.8.pdf 10025023 BLAKE2B afb0a6e6a72d78df743fcb57e7c1716848589e571dd35167b957a9b407ca27978ccfb6cb9e0df9c9439b888f352501a00ba32281ed1e0b4193bd606f1d77152e SHA512 b1972f7ce965bfc9377542993c5943ea4868a8ed23a969d4203264746d6bea3a7a65c6379196ece37fd6d68ec7ec80f827bde87d1049284af7082759a124f1d5 DIST manual-2019.6.pdf 12702376 BLAKE2B c350127bc06a9eb3dee73da39037c84daeb89500e23cb131bd19a150bf60602d4dde7611e0c6f0f344af4093e96a899303dac71b4df56fd0c44c3a48a56606b7 SHA512 dfdff67c2c1c9ce1f1c236b7686c5331b0fe86951da6c98eddd6a3e748815e0be0a9653ae4318469fcdd913c4e7c355d64a997cc80b9d9fbe6282ef6d98e61eb DIST manual-2020.7.pdf 11850780 BLAKE2B 38594e87993badfbbcf47d6010a7f67d3c3426dab85e1462916b4d62be27b5764953f912cf2b71ee24877e0bfa27b3f74431da2da81b4977d58cb66b2cc795a3 SHA512 4f184f2c90e0bac01a48069cc546cd5b04fa5f543f90dd2d68c6d17be278152fd09456b6a6c5c8236f8fb85a174d6ec7a1c7b44d437b4e6fea5d0ada73cec0f6 DIST manual-2021.6.pdf 12256595 BLAKE2B 5d808e38571b38c1f6e0d115f6e604238206cc001f59d05ed855e80c324c0e6fd7767adb723b3d0edd1267ae5973a3b83b76bd04d2dc99769e6440600d8e2146 SHA512 64fe56422d7417f6f61b10346c99e24c3f423f0cedc3794e0809250282bc87ef692b47ae6c3f95ad7994aa3860ed82035cbacc76eb78a2f54a29052a05260af2 +DIST manual-2021.7.pdf 12256526 BLAKE2B 6f298d7dac142f66914bbc2ea7d6ca70c4aeafaf33ccf12336d5cec64b1f1097b5332c767bb411ccef706ec6184479a84bcf59bda21c4249d45d8ce3dea08e79 SHA512 197765accb8ab6c5f1cc94b2697ff1817e157d85fa231dfe36a85036076e04da2a8035de66aba4f46c6dd7f553176357b94c92e1da5d1dabc574c627deee5279 DIST manual-2022.4.pdf 13080976 BLAKE2B 45685fa1d727aa30425e946ac72e0bd723528032e3fb45525d3c025316ee2682ea3c9cc2fd75b5cd4e900adbc6e7f577e3368d9e0681294fd1515df3d2e5d840 SHA512 a7ac3a80a90f14b6917e15633d77230d24cdcf19ade38d14b35c6451074848a7754b33c612e2a26a657f2edd3d6710e5a8130cacb107d4085d1bd934267ad623 DIST manual-2023-rc1.pdf 13506754 BLAKE2B 9487753e788fa5b2d01255717769e0b01cf7adcb4ae99a1f37f4ad0f8acccfbf4eff0a4c76add63bc82bffdf844cf8dd1d858d15a6bacd6635ec3a3474e10f6f SHA512 f26df914402793c656a798847524c0b9207a4163bb36d6cb90740a699418719f7b124343b4886e50d92023c14f8c1e61e950c12b8e1e4702007e34677cd17ef2 DIST regressiontests-2018.8.tar.gz 6785546
[gentoo-commits] proj/sci:master commit in: sci-chemistry/relion/
commit: c2861a35cb4f890544347dc141403e8dc32c8ff5 Author: Alexey Shvetsov gentoo org> AuthorDate: Wed Feb 1 12:03:34 2023 + Commit: Alexey Shvetsov gentoo org> CommitDate: Wed Feb 1 12:03:34 2023 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=c2861a35 sci-chemistry/relion: Update relion ebuilds Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/relion/metadata.xml| 1 + sci-chemistry/relion/relion-4.0.0.ebuild | 30 +- sci-chemistry/relion/relion-.ebuild | 69 3 files changed, 98 insertions(+), 2 deletions(-) diff --git a/sci-chemistry/relion/metadata.xml b/sci-chemistry/relion/metadata.xml index 33e6e7e5d..101a056b9 100644 --- a/sci-chemistry/relion/metadata.xml +++ b/sci-chemistry/relion/metadata.xml @@ -11,6 +11,7 @@ Enable relion gui + Enable CUDA support 3dem/relion diff --git a/sci-chemistry/relion/relion-4.0.0.ebuild b/sci-chemistry/relion/relion-4.0.0.ebuild index a40375f64..c6d7d90db 100644 --- a/sci-chemistry/relion/relion-4.0.0.ebuild +++ b/sci-chemistry/relion/relion-4.0.0.ebuild @@ -7,11 +7,22 @@ inherit cmake DESCRIPTION="Image-processing software for cryo-electron microscopy" HOMEPAGE="https://www3.mrc-lmb.cam.ac.uk/relion/index.php/Main_Page"; -SRC_URI="https://github.com/3dem/relion/archive/${PV}.tar.gz -> ${P}.tar.gz" + +if [[ ${PV} = ** ]]; then + EGIT_REPO_URI="https://github.com/3dem/relion.git"; + [[ ${PV} = ]] && EGIT_BRANCH="master" || EGIT_BRANCH="ver${PV:0:4}" + inherit git-r3 + SRC_URI="ftp://ftp.mrc-lmb.cam.ac.uk/pub/dari/class_ranker_0.1.3_torch_1.0.1.pt.tar.gz"; +else + SRC_URI=" + https://github.com/3dem/relion/archive/${PV}.tar.gz -> ${P}.tar.gz + ftp://ftp.mrc-lmb.cam.ac.uk/pub/dari/class_ranker_0.1.3_torch_1.0.1.pt.tar.gz + " + KEYWORDS="~amd64" +fi LICENSE="GPL-2" SLOT="0" -KEYWORDS="~amd64" IUSE="+gui cuda" DEPEND=" @@ -30,6 +41,21 @@ BDEPEND="${DEPEND}" PATCHES=( "${FILESDIR}/${PN}-4.0.0-build.patch" ) +src_unpack() { + git-r3_src_unpack + default +} + +src_prepare() { + cmake_src_prepare + mkdir -p "${S}/external/torch_models/" + cp "${DISTDIR}/class_ranker_0.1.3_torch_1.0.1.pt.tar.gz" "${S}/external/torch_models/" + mkdir -p "${S}/external/torch_models/class_ranker/" + cp "${WORKDIR}/class_ranker_0.1.3_torch_1.0.1.pt" "${S}/external/torch_models/class_ranker/" + sed -e "s:{CMAKE_INSTALL_PREFIX}/lib:{CMAKE_INSTALL_PREFIX}/$(get_libdir):g" -i CMakeLists.txt || die + sed -e "s:LIBRARY DESTINATION lib:LIBRARY DESTINATION $(get_libdir):g" -i src/apps/CMakeLists.txt || die +} + src_configure() { CMAKE_BUILD_TYPE=Release mycmakeargs=( diff --git a/sci-chemistry/relion/relion-.ebuild b/sci-chemistry/relion/relion-.ebuild new file mode 100644 index 0..12e09d2fe --- /dev/null +++ b/sci-chemistry/relion/relion-.ebuild @@ -0,0 +1,69 @@ +# Copyright 2019-2021 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +inherit cmake + +DESCRIPTION="Image-processing software for cryo-electron microscopy" +HOMEPAGE="https://www3.mrc-lmb.cam.ac.uk/relion/index.php/Main_Page"; + +if [[ ${PV} = ** ]]; then + EGIT_REPO_URI="https://github.com/3dem/relion.git"; + [[ ${PV} = ]] && EGIT_BRANCH="master" || EGIT_BRANCH="ver${PV:0:4}" + inherit git-r3 + SRC_URI="ftp://ftp.mrc-lmb.cam.ac.uk/pub/dari/class_ranker_0.1.3_torch_1.0.1.pt.tar.gz"; +else + SRC_URI=" + https://github.com/3dem/relion/archive/${PV}.tar.gz -> ${P}.tar.gz + ftp://ftp.mrc-lmb.cam.ac.uk/pub/dari/class_ranker_0.1.3_torch_1.0.1.pt.tar.gz + " + KEYWORDS="~amd64" +fi + +LICENSE="GPL-2" +SLOT="0" +IUSE="+gui cuda" + +DEPEND=" + gui? ( x11-libs/fltk ) + cuda? ( dev-util/nvidia-cuda-toolkit ) + dev-cpp/tbb + sci-libs/fftw:3.0 + media-libs/tiff + virtual/mpi +" +RDEPEND=" + ${DEPEND} + sci-chemistry/ctffind +" +BDEPEND="${DEPEND}" + +src_unpack() { + git-r3_src_unpack + default +} + +src_prepare() { + cmake_src_prepare + mkdir -p "${S}/external/torch_models/" + cp "${DISTDIR}/class_ranker_0.1.3_torch_1.0.1.pt.tar.gz" "${S}/external/torch_models/" + mkdir -p "${S}/external/torch_models/class_ranker/" + cp "${WORKDIR}/class_
[gentoo-commits] proj/sci:master commit in: sci-chemistry/ctffind/
commit: e4b26afe8e26547c7696cc6969cf494801ea5935 Author: Alexey Shvetsov gentoo org> AuthorDate: Wed Feb 1 11:58:06 2023 + Commit: Alexey Shvetsov gentoo org> CommitDate: Wed Feb 1 11:58:06 2023 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=e4b26afe sci-chemistry/ctffind: add 4.1.10, 4.1.13 Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/ctffind/ctffind-4.1.10.ebuild | 37 + sci-chemistry/ctffind/ctffind-4.1.13.ebuild | 37 + 2 files changed, 74 insertions(+) diff --git a/sci-chemistry/ctffind/ctffind-4.1.10.ebuild b/sci-chemistry/ctffind/ctffind-4.1.10.ebuild new file mode 100644 index 0..a69a36308 --- /dev/null +++ b/sci-chemistry/ctffind/ctffind-4.1.10.ebuild @@ -0,0 +1,37 @@ +# Copyright 2019-2021 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=7 + +WX_GTK_VER="3.0-gtk3" +inherit wxwidgets + +DESCRIPTION="CTF estimation (ctffind, ctftilt)" +HOMEPAGE="https://grigoriefflab.umassmed.edu/"; +SRC_URI="https://grigoriefflab.umassmed.edu/system/tdf?path=ctffind-${PV}.tar.gz&file=1&type=node&id=26 -> ${P}.tar.gz" + +LICENSE="Janelia-1.2" +SLOT="0" +KEYWORDS="~amd64 ~x86" + +DEPEND=" + sci-libs/fftw:3.0 + media-libs/libjpeg-turbo + media-libs/tiff + x11-libs/wxGTK:* +" +RDEPEND="${DEPEND}" +BDEPEND=" + ${DEPEND} + virtual/pkgconfig" + +src_prepare() { + default + sed /pdb/d -i src/core/core_headers.h || die "removing pdb.h failed" + sed /water/d -i src/core/core_headers.h || die "removing water.h failed" +} + +src_configure() { + setup-wxwidgets + default +} diff --git a/sci-chemistry/ctffind/ctffind-4.1.13.ebuild b/sci-chemistry/ctffind/ctffind-4.1.13.ebuild new file mode 100644 index 0..a69a36308 --- /dev/null +++ b/sci-chemistry/ctffind/ctffind-4.1.13.ebuild @@ -0,0 +1,37 @@ +# Copyright 2019-2021 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=7 + +WX_GTK_VER="3.0-gtk3" +inherit wxwidgets + +DESCRIPTION="CTF estimation (ctffind, ctftilt)" +HOMEPAGE="https://grigoriefflab.umassmed.edu/"; +SRC_URI="https://grigoriefflab.umassmed.edu/system/tdf?path=ctffind-${PV}.tar.gz&file=1&type=node&id=26 -> ${P}.tar.gz" + +LICENSE="Janelia-1.2" +SLOT="0" +KEYWORDS="~amd64 ~x86" + +DEPEND=" + sci-libs/fftw:3.0 + media-libs/libjpeg-turbo + media-libs/tiff + x11-libs/wxGTK:* +" +RDEPEND="${DEPEND}" +BDEPEND=" + ${DEPEND} + virtual/pkgconfig" + +src_prepare() { + default + sed /pdb/d -i src/core/core_headers.h || die "removing pdb.h failed" + sed /water/d -i src/core/core_headers.h || die "removing water.h failed" +} + +src_configure() { + setup-wxwidgets + default +}
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gromacs/
commit: 87dffbbeea8f54dc3fadce38abb094609eaa Author: Alexey Shvetsov gentoo org> AuthorDate: Mon Jan 30 06:42:02 2023 + Commit: Alexey Shvetsov gentoo org> CommitDate: Mon Jan 30 06:42:27 2023 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=87dffbbe sci-chemistry/gromacs: drop versions Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/gromacs/Manifest | 12 - sci-chemistry/gromacs/gromacs-2019.6-r1.ebuild | 250 -- sci-chemistry/gromacs/gromacs-2020.4-r1.ebuild | 347 sci-chemistry/gromacs/gromacs-2021.3-r1.ebuild | 352 - sci-chemistry/gromacs/gromacs-2021.5.ebuild| 352 - sci-chemistry/gromacs/gromacs-2022.3.ebuild| 333 --- 6 files changed, 1646 deletions(-) diff --git a/sci-chemistry/gromacs/Manifest b/sci-chemistry/gromacs/Manifest index 48bb6ecb5abb..6166ff22c51f 100644 --- a/sci-chemistry/gromacs/Manifest +++ b/sci-chemistry/gromacs/Manifest @@ -1,30 +1,18 @@ DIST gromacs-2018.8.tar.gz 29913703 BLAKE2B 8780032305928067fbfe1559efe9eedc4d47e27ab2f6ab54d6dba39edfcbeefbee4673d8910009048a850620b5a08ba8feb622db652c439cfa50a149ec5f0015 SHA512 6717895942f2ab7b54019511ed2aebadadde8e96d3c4b7414bb9168ffe418432d2dee330192e199f7b9d2f665c71f5d4f1ef0911aa7243d525a2ca182ef5b122 DIST gromacs-2019.6.tar.gz 33446147 BLAKE2B adc21fb6b841b06d499607f8c0166a673645ef5af0b40bd823d0fff5ea24397e6301c5e1e0070986ae1ce1deba8a42052b66da148b071c1e21f2fe3908fee275 SHA512 7c227a9539e5775d5d128ae9e872a24181d79cdcd2852b86453597987e8d7332ecec371da65d089f6e610c54aafbccc8824ce298743383dd6240719ebee692a8 -DIST gromacs-2020.4.tar.gz 29149899 BLAKE2B a07c8efd96137d58c1edf4ac9b5aafeb16d9e65234b9459b71471827032654acacb58ed6ae87ec6e0e593a0acd799683cc4461b06cc883b089d740708619345e SHA512 0c56f058741af70660baf0177724ec940dd984c05ea141ede91ee51ce3744f76d00e31bdb5db907e46fa1639de5dca637b3ace26e89f908c2e74c69f0c21ed3a DIST gromacs-2020.7.tar.gz 29175554 BLAKE2B 98f1aa415946f8eb113febc81105f0c1b0919b96fc3c55a0ab83bf3950ff509b81eade92e645adb0bc2b407df239e20cf3f19828b6e08616437c8693c1fddcc8 SHA512 1d375c44cec38445e56cea252623b5b6c565680268999d4b6c14d6dc38759a27227655b2d29efaab9f9115d3677b446cb555e11cddafa0dc10c4827caaa2477b -DIST gromacs-2021.3.tar.gz 37987972 BLAKE2B d71995c7d5a34978246e33dc637ac3d273e547afcf72d1a107026650f03286ecdf27e4b9a70113b3c3a01af59ad49ac5c813aa6e5d2e8eb29fd05582a7a28d34 SHA512 da420917d06de2e192dfbb4e1b9f46989ed05b5c7e641c657104ed8f2bd8b22509bffd1ecfd7c965c80544eafa6af12d6d0aba7e1e7d9d14a4a88fb3fbf394a5 -DIST gromacs-2021.5.tar.gz 38023772 BLAKE2B 45e1f080b86626423e471f06b48b615db1913048f9f6998da8ce45408339b32f829d33dd2af57297a7d307fcffd556c333a58c309ee0f2adb021ca3755619b05 SHA512 56c1b312fc8e52ec6f86e445d2fa2d07107c461b35d4dc8cdf95580f05fd8e6c5fd671d0e72b2b9e74e3232bc8c41db496fe4bcaf2b9a3ae3c2cfa93489a31c5 DIST gromacs-2021.6.tar.gz 38012702 BLAKE2B 023ae37dc53643758afa050fd179cd66f3c6d6266f6afceee5eb35c890a3ae284956f2bc2409156d6e1fa03a7f23f7b04c27e1820547fd5f147b344d94da7d40 SHA512 65d7874e5cd838ce4f29d033c66304738ccc30f1987f9f8541725058b2fc4551302a399f6ce773e81ac9485963187c48feaf92c71789f4c345c82bd335f806a7 -DIST gromacs-2022.3.tar.gz 40359623 BLAKE2B 23beacf7208df89aea6c3effe483361451a9ff20428fe79ec163a5eee4dc0db0bb00a2bee84bc9377ad272f216fd372eab1b77e8542ce231ac785b41b582fa15 SHA512 1a6a1674ed17dfd93dcd51537cd13c9df5bb9bd91c3a26601032f83b788a93689bac8070eb8e495a786d41cc9d474885538cbaffa4229da70dfa640ee42b7c60 DIST gromacs-2022.4.tar.gz 40352282 BLAKE2B 616ba05a70a483d7d8fadefb383ac9fc8825ac09ea92f55a0222c57ac91e4a045fb55405ec963303d8dbabb04b3d1f8c73062785b3812b3c6b7582e002dc5538 SHA512 15c642f2b63c1731a01a3b58c13d454f57c29607554a6693c2e62f38da574c6d596c5cb6f361e0feb5e1069b3b19bb49ceaa432c030da91f48e41654e3e6a62f DIST gromacs-2023-rc1.tar.gz 41863824 BLAKE2B c365ccd83b8f271be8f1a515f4dc0ebd729ce43023e979a52046fc827e786f84f09de894af9b8da4f7ce6e06a1ae050e8ff387892f76787857327ce2bc397042 SHA512 7ab8158624e0c93c0f06bd7023b97012d80afa5e068cb4489e7e9700171a5a8f69ae042bf0256c78aaec527d9a1b88f5f2dce6c8c7d4f46a457b6a9568b70f45 DIST manual-2018.8.pdf 10025023 BLAKE2B afb0a6e6a72d78df743fcb57e7c1716848589e571dd35167b957a9b407ca27978ccfb6cb9e0df9c9439b888f352501a00ba32281ed1e0b4193bd606f1d77152e SHA512 b1972f7ce965bfc9377542993c5943ea4868a8ed23a969d4203264746d6bea3a7a65c6379196ece37fd6d68ec7ec80f827bde87d1049284af7082759a124f1d5 DIST manual-2019.6.pdf 12702376 BLAKE2B c350127bc06a9eb3dee73da39037c84daeb89500e23cb131bd19a150bf60602d4dde7611e0c6f0f344af4093e96a899303dac71b4df56fd0c44c3a48a56606b7 SHA512 dfdff67c2c1c9ce1f1c236b7686c5331b0fe86951da6c98eddd6a3e748815e0be0a9653ae4318469fcdd913c4e7c355d64a997cc80b9d9fbe6282ef6d98e61eb -DIST manual-2020.4.pdf 11851608 BLAKE2B 7b7bdf08e8946fcc448543b08391b94a67fee60a8c810597c1f09f70443f9d7db817c99622dd0c21c6317f5fdcd6c4a88589ecac57055cb0cd8597d
[gentoo-commits] proj/sci:master commit in: sci-chemistry/relion/files/, sci-chemistry/relion/
commit: 088d793bd7acfaefde2894b5654763daeb31b34c Author: Alexey Shvetsov gentoo org> AuthorDate: Tue Dec 27 22:23:09 2022 + Commit: Alexey Shvetsov gentoo org> CommitDate: Tue Dec 27 22:23:09 2022 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=088d793b sci-chemistry/relion: add 4.0.0, drop 3.1.1 Signed-off-by: Alexey Shvetsov gentoo.org> .../relion/files/relion-4.0.0-build.patch | 39 ++ .../{relion-3.1.1.ebuild => relion-4.0.0.ebuild} | 9 +++-- 2 files changed, 45 insertions(+), 3 deletions(-) diff --git a/sci-chemistry/relion/files/relion-4.0.0-build.patch b/sci-chemistry/relion/files/relion-4.0.0-build.patch new file mode 100644 index 0..d7cb7bf2e --- /dev/null +++ b/sci-chemistry/relion/files/relion-4.0.0-build.patch @@ -0,0 +1,39 @@ +From 138b9c71b41a3c8782c991053a28bfe074bffdd9 Mon Sep 17 00:00:00 2001 +From: Takanori Nakane +Date: Fri, 28 Oct 2022 19:51:29 +0900 +Subject: [PATCH] Repaired the build failure reported in #826 (by + @prehensilecode and @acaprez) + +--- + src/apps/CMakeLists.txt | 16 + 1 file changed, 8 insertions(+), 8 deletions(-) + +diff --git a/src/apps/CMakeLists.txt b/src/apps/CMakeLists.txt +index 9870b735..30985aa7 100644 +--- a/src/apps/CMakeLists.txt b/src/apps/CMakeLists.txt +@@ -273,16 +273,16 @@ if (CUDA_FOUND) + + + +- file(GLOB REL_JAZ_CUDA_SRC "${CMAKE_SOURCE_DIR}/src/jaz/cuda/*.cu" "${CMAKE_SOURCE_DIR}/src/jaz/cuda/kernels/*.cu" ) ++ file(GLOB REL_JAZ_CUDA_SRC "${CMAKE_SOURCE_DIR}/src/jaz/cuda/*.cu") + cuda_add_library(relion_jaz_gpu_util ${REL_JAZ_CUDA_SRC}) + +- #list(APPEND EXTRA_LIBS "${CUDA_CUFFT_LIBRARIES}") +- #if(BUILD_SHARED_LIBS) +- # install (TARGETS relion_jaz_gpu_util LIBRARY DESTINATION lib) +- #else() +- # target_link_libraries(relion_jaz_gpu_util relion_lib) +- # target_link_libraries(relion_jaz_gpu_util ${CUDA_CUFFT_LIBRARIES}) +- #endif() ++ list(APPEND EXTRA_LIBS "${CUDA_CUFFT_LIBRARIES}") ++ if(BUILD_SHARED_LIBS) ++ install (TARGETS relion_jaz_gpu_util LIBRARY DESTINATION lib) ++ else() ++ target_link_libraries(relion_jaz_gpu_util relion_lib) ++ target_link_libraries(relion_jaz_gpu_util ${CUDA_CUFFT_LIBRARIES}) ++ endif() + + target_link_libraries(relion_lib relion_jaz_gpu_util ${CUDA_CUFFT_LIBRARIES}) + target_link_libraries(relion_lib relion_jaz_gpu_util ${CUDA_CUFFT_LIBRARIES} ${CUDA_curand_LIBRARY}) diff --git a/sci-chemistry/relion/relion-3.1.1.ebuild b/sci-chemistry/relion/relion-4.0.0.ebuild similarity index 84% rename from sci-chemistry/relion/relion-3.1.1.ebuild rename to sci-chemistry/relion/relion-4.0.0.ebuild index 39e4ab229..a40375f64 100644 --- a/sci-chemistry/relion/relion-3.1.1.ebuild +++ b/sci-chemistry/relion/relion-4.0.0.ebuild @@ -1,7 +1,7 @@ # Copyright 2019-2021 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 -EAPI=7 +EAPI=8 inherit cmake @@ -12,10 +12,11 @@ SRC_URI="https://github.com/3dem/relion/archive/${PV}.tar.gz -> ${P}.tar.gz" LICENSE="GPL-2" SLOT="0" KEYWORDS="~amd64" -IUSE="+gui" +IUSE="+gui cuda" DEPEND=" gui? ( x11-libs/fltk ) + cuda? ( dev-util/nvidia-cuda-toolkit ) dev-cpp/tbb sci-libs/fftw:3.0 media-libs/tiff @@ -27,6 +28,8 @@ RDEPEND=" " BDEPEND="${DEPEND}" +PATCHES=( "${FILESDIR}/${PN}-4.0.0-build.patch" ) + src_configure() { CMAKE_BUILD_TYPE=Release mycmakeargs=( @@ -35,7 +38,7 @@ src_configure() { -DFORCE_OWN_FFTW=OFF -DFORCE_OWN_FLTK=OFF -DFORCE_OWN_TBB=OFF - -DCUDA=OFF + -DCUDA=$(usex cuda) -DGUI=$(usex gui) ) cmake_src_configure
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/MDAnalysis/
commit: 1b327b9680ee5a6b83e2f600aa177da6796152a5 Author: Alexey Shvetsov gentoo org> AuthorDate: Sun Dec 25 22:13:18 2022 + Commit: Alexey Shvetsov gentoo org> CommitDate: Sun Dec 25 22:14:59 2022 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=1b327b96 sci-chemistry/MDAnalysis: Version bump. No longer depend on nose Closes: https://bugs.gentoo.org/765160 Closes: https://bugs.gentoo.org/878723 Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/MDAnalysis/MDAnalysis-1.0.0.ebuild | 37 -- ...alysis-2.0.0.ebuild => MDAnalysis-2.4.1.ebuild} | 6 ++-- sci-chemistry/MDAnalysis/Manifest | 3 +- 3 files changed, 5 insertions(+), 41 deletions(-) diff --git a/sci-chemistry/MDAnalysis/MDAnalysis-1.0.0.ebuild b/sci-chemistry/MDAnalysis/MDAnalysis-1.0.0.ebuild deleted file mode 100644 index 1f9c2ac3aa5e.. --- a/sci-chemistry/MDAnalysis/MDAnalysis-1.0.0.ebuild +++ /dev/null @@ -1,37 +0,0 @@ -# Copyright 1999-2022 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -PYTHON_COMPAT=( python3_{7..10} ) - -inherit distutils-r1 - -DESCRIPTION="A python library to analyze and manipulate molecular dynamics trajectories" -HOMEPAGE="https://www.mdanalysis.org"; -SRC_URI="mirror://pypi/M/${PN}/${P}.tar.gz" - -SLOT="0" -LICENSE="GPL-2" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="test" - -RDEPEND=" - >=dev-python/numpy-1.13.3[${PYTHON_USEDEP}] - >=dev-python/scipy-1.0.0[${PYTHON_USEDEP}] - >=sci-biology/biopython-1.71[${PYTHON_USEDEP}] - >=dev-python/networkx-1.0[${PYTHON_USEDEP}] - >=dev-python/GridDataFormats-0.4.0[${PYTHON_USEDEP}] - >=dev-python/joblib-0.12[${PYTHON_USEDEP}] - >=dev-python/matplotlib-1.5.1[${PYTHON_USEDEP}] - dev-python/netcdf4-python[${PYTHON_USEDEP}] - >=dev-python/mmtf-python-1.0.0[${PYTHON_USEDEP}] - >=dev-python/gsd-1.9.3[${PYTHON_USEDEP}] - dev-python/mock[${PYTHON_USEDEP}] - dev-python/duecredit[${PYTHON_USEDEP}] - >=dev-python/six-1.4.0[${PYTHON_USEDEP}] - >=dev-python/tqdm-4.43.0[${PYTHON_USEDEP}] -" -BDEPEND="${RDEPEND}" - -distutils_enable_tests nose diff --git a/sci-chemistry/MDAnalysis/MDAnalysis-2.0.0.ebuild b/sci-chemistry/MDAnalysis/MDAnalysis-2.4.1.ebuild similarity index 91% rename from sci-chemistry/MDAnalysis/MDAnalysis-2.0.0.ebuild rename to sci-chemistry/MDAnalysis/MDAnalysis-2.4.1.ebuild index aee4e82b683e..5d561772ca51 100644 --- a/sci-chemistry/MDAnalysis/MDAnalysis-2.0.0.ebuild +++ b/sci-chemistry/MDAnalysis/MDAnalysis-2.4.1.ebuild @@ -1,10 +1,12 @@ -# Copyright 1999-2021 Gentoo Authors +# Copyright 1999-2022 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 EAPI=8 PYTHON_COMPAT=( python3_{8..10} ) +DISTUTILS_USE_PEP517=setuptools + inherit distutils-r1 DESCRIPTION="A python library to analyze and manipulate molecular dynamics trajectories" @@ -34,4 +36,4 @@ RDEPEND=" " BDEPEND="${RDEPEND}" -distutils_enable_tests nose +distutils_enable_tests pytest diff --git a/sci-chemistry/MDAnalysis/Manifest b/sci-chemistry/MDAnalysis/Manifest index 721870b0e526..81a4e8053d86 100644 --- a/sci-chemistry/MDAnalysis/Manifest +++ b/sci-chemistry/MDAnalysis/Manifest @@ -1,2 +1 @@ -DIST MDAnalysis-1.0.0.tar.gz 19552874 BLAKE2B dab625a898d71a67a37ac5b58eb23ded9487f475e3c76f6c335a0ed5b32a43785d0473d089fcfc56c07263d82248bf5ee7b50c513441b10fc97f97b49411cc5f SHA512 4a001f45695308dd5f296bd2850d5d585c065e6b0f55efca65d91e452d78c85f13fd614eca0176a8d330e14a1c9e8ccbb919c3d4ae995b1945d09dc3ad687195 -DIST MDAnalysis-2.0.0.tar.gz 3436654 BLAKE2B b29734dd61bfa1e4e1d6ead0eb9a2d00869d1adce18edf95b9368bdcc16b0d71d0d6536a7df48787034a623bf52585e1636842dcaaa9dde08a69576868c1657b SHA512 037eb3c709b9ddbdb2ba9b26a6632ff99a95331c3968176573076e4e208c8644c3ea262e1e9880f185eb080ff90180d887444cab0dfbfad04fc254d87f1ff986 +DIST MDAnalysis-2.4.1.tar.gz 3746899 BLAKE2B af63f74a31dcde8a68cbffe5158f2f955d5eda1345bcff6a19e8df3284101b1e85006de3326d29d4fe1867dc6b0c5f55467b9e3242704f97440c6a43b52f47b8 SHA512 796dad98c26bd36f30db166bea5ff782aa5e3ac5cddb1675b628fb753a4f645fb27e06d3986047e2ba21a22cd91f96d0ba8e529256ed960a2b7cf95204076927
[gentoo-commits] repo/gentoo:master commit in: dev-python/pika/
commit: cfc593b8785018633817295319ee9db0bc85b74f Author: Alexey Shvetsov gentoo org> AuthorDate: Sat Dec 24 21:51:28 2022 + Commit: Alexey Shvetsov gentoo org> CommitDate: Sat Dec 24 21:51:45 2022 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=cfc593b8 dev-python/pika: add 1.3.1, drop 1.3.0 No longer depends on nose (but depends on nose2) Closes: https://bugs.gentoo.org/877613 Signed-off-by: Alexey Shvetsov gentoo.org> dev-python/pika/Manifest | 2 +- dev-python/pika/{pika-1.3.0.ebuild => pika-1.3.1.ebuild} | 3 +-- 2 files changed, 2 insertions(+), 3 deletions(-) diff --git a/dev-python/pika/Manifest b/dev-python/pika/Manifest index 513ab2001d12..b63cf1411ac3 100644 --- a/dev-python/pika/Manifest +++ b/dev-python/pika/Manifest @@ -1 +1 @@ -DIST pika-1.3.0.gh.tar.gz 316588 BLAKE2B 0d808b45aa72d7d01fde41d85fbe07c44f7c87dac0b5e6bd40f09264370eaec55bb8d003cae36b0b9835615ab6a94c6f227c499866db63f8fc1c8a4e9592d324 SHA512 ebc12faf2d180dbc226afa34a37492f121d3a01f8884b90bfb0f31972bfb14d8cbff3fa00c2350314f7da4471b34e261328e50f878cd9df67ab896478f28e731 +DIST pika-1.3.1.gh.tar.gz 321628 BLAKE2B c473ec22dc20d0bdf87848b37dbca6d7c1a0581e23e89dbd6b7de382575133ae0c7db6ae505585297fd3253d948df35c74b801ff2a72c8e8cc5a53ddbfabcc48 SHA512 5b3b785f74cd11433198dfb9b423daae9f3acac6cee158638ac793d1bd575296d0d6425165f3f00338a65f89f48e1c2795725e7a4f791e815a5837b25c69ba46 diff --git a/dev-python/pika/pika-1.3.0.ebuild b/dev-python/pika/pika-1.3.1.ebuild similarity index 95% rename from dev-python/pika/pika-1.3.0.ebuild rename to dev-python/pika/pika-1.3.1.ebuild index 39213c7d8bd3..dfa2af433a30 100644 --- a/dev-python/pika/pika-1.3.0.ebuild +++ b/dev-python/pika/pika-1.3.1.ebuild @@ -4,7 +4,7 @@ EAPI=8 DISTUTILS_USE_PEP517=setuptools -PYTHON_COMPAT=( python3_{8..10} ) +PYTHON_COMPAT=( python3_{8..11} ) inherit distutils-r1 DESCRIPTION="Pure-Python implementation of the AMQP" @@ -24,7 +24,6 @@ PROPERTIES="test_network" BDEPEND=" test? ( - dev-python/nose[${PYTHON_USEDEP}] dev-python/nose2[${PYTHON_USEDEP}] dev-python/twisted[${PYTHON_USEDEP}] dev-python/tornado[${PYTHON_USEDEP}]
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gromacs/
commit: e8387da1f4d652ed6404a48d7dca5c4bae9f8e32 Author: Alexey Shvetsov gentoo org> AuthorDate: Thu Dec 22 16:53:15 2022 + Commit: Alexey Shvetsov gentoo org> CommitDate: Thu Dec 22 16:53:15 2022 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=e8387da1 sci-chemistry/gromacs: Fix manual build Closes: https://bugs.gentoo.org/887611 Closes: https://bugs.gentoo.org/887683 Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/gromacs/gromacs-2023..ebuild | 2 +- sci-chemistry/gromacs/gromacs-2023_rc1.ebuild | 2 +- sci-chemistry/gromacs/gromacs-.ebuild | 2 +- 3 files changed, 3 insertions(+), 3 deletions(-) diff --git a/sci-chemistry/gromacs/gromacs-2023..ebuild b/sci-chemistry/gromacs/gromacs-2023..ebuild index c69ff70b99d3..36a9fd3ae771 100644 --- a/sci-chemistry/gromacs/gromacs-2023..ebuild +++ b/sci-chemistry/gromacs/gromacs-2023..ebuild @@ -301,7 +301,7 @@ src_install() { if use doc; then if [[ ${PV} != ** ]]; then - newdoc "${DISTDIR}/manual-${PV}.pdf" "${PN}-manual-${PV}.pdf" + newdoc "${DISTDIR}/manual-${PV/_/-}.pdf" "${PN}-manual-${PV}.pdf" fi fi done diff --git a/sci-chemistry/gromacs/gromacs-2023_rc1.ebuild b/sci-chemistry/gromacs/gromacs-2023_rc1.ebuild index c69ff70b99d3..36a9fd3ae771 100644 --- a/sci-chemistry/gromacs/gromacs-2023_rc1.ebuild +++ b/sci-chemistry/gromacs/gromacs-2023_rc1.ebuild @@ -301,7 +301,7 @@ src_install() { if use doc; then if [[ ${PV} != ** ]]; then - newdoc "${DISTDIR}/manual-${PV}.pdf" "${PN}-manual-${PV}.pdf" + newdoc "${DISTDIR}/manual-${PV/_/-}.pdf" "${PN}-manual-${PV}.pdf" fi fi done diff --git a/sci-chemistry/gromacs/gromacs-.ebuild b/sci-chemistry/gromacs/gromacs-.ebuild index c69ff70b99d3..36a9fd3ae771 100644 --- a/sci-chemistry/gromacs/gromacs-.ebuild +++ b/sci-chemistry/gromacs/gromacs-.ebuild @@ -301,7 +301,7 @@ src_install() { if use doc; then if [[ ${PV} != ** ]]; then - newdoc "${DISTDIR}/manual-${PV}.pdf" "${PN}-manual-${PV}.pdf" + newdoc "${DISTDIR}/manual-${PV/_/-}.pdf" "${PN}-manual-${PV}.pdf" fi fi done
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gromacs/
commit: ade65a5307e693745065ae30af5eb4b90c4dbf06 Author: Alexey Shvetsov gentoo org> AuthorDate: Tue Dec 20 21:15:19 2022 + Commit: Alexey Shvetsov gentoo org> CommitDate: Tue Dec 20 21:16:20 2022 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=ade65a53 sci-chemistry/gromacs: Refuse to build with double + opencl enabled Closes: https://bugs.gentoo.org/873166 Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/gromacs/gromacs-2018.8-r1.ebuild | 1 + sci-chemistry/gromacs/gromacs-2019.6-r1.ebuild | 1 + sci-chemistry/gromacs/gromacs-2019.6-r2.ebuild | 1 + sci-chemistry/gromacs/gromacs-2020.4-r1.ebuild | 1 + sci-chemistry/gromacs/gromacs-2020.7.ebuild| 1 + sci-chemistry/gromacs/gromacs-2021.3-r1.ebuild | 1 + sci-chemistry/gromacs/gromacs-2021.5.ebuild| 1 + sci-chemistry/gromacs/gromacs-2021.6.ebuild| 1 + sci-chemistry/gromacs/gromacs-2021..ebuild | 1 + sci-chemistry/gromacs/gromacs-2022.3.ebuild| 1 + sci-chemistry/gromacs/gromacs-2022.4.ebuild| 1 + sci-chemistry/gromacs/gromacs-2022..ebuild | 1 + sci-chemistry/gromacs/gromacs-2023..ebuild | 1 + sci-chemistry/gromacs/gromacs-2023_rc1.ebuild | 1 + sci-chemistry/gromacs/gromacs-.ebuild | 1 + 15 files changed, 15 insertions(+) diff --git a/sci-chemistry/gromacs/gromacs-2018.8-r1.ebuild b/sci-chemistry/gromacs/gromacs-2018.8-r1.ebuild index 8933f1086eac..255810902b42 100644 --- a/sci-chemistry/gromacs/gromacs-2018.8-r1.ebuild +++ b/sci-chemistry/gromacs/gromacs-2018.8-r1.ebuild @@ -48,6 +48,7 @@ RDEPEND="${CDEPEND}" REQUIRED_USE=" || ( single-precision double-precision ) cuda? ( single-precision ) + opencl? ( single-precision ) cuda? ( !opencl ) mkl? ( !blas !fftw !lapack )" diff --git a/sci-chemistry/gromacs/gromacs-2019.6-r1.ebuild b/sci-chemistry/gromacs/gromacs-2019.6-r1.ebuild index 7999d7a192fd..bf9f493d1163 100644 --- a/sci-chemistry/gromacs/gromacs-2019.6-r1.ebuild +++ b/sci-chemistry/gromacs/gromacs-2019.6-r1.ebuild @@ -50,6 +50,7 @@ RDEPEND="${CDEPEND}" REQUIRED_USE=" || ( single-precision double-precision ) cuda? ( single-precision ) + opencl? ( single-precision ) cuda? ( !opencl ) mkl? ( !blas !fftw !lapack ) ${PYTHON_REQUIRED_USE}" diff --git a/sci-chemistry/gromacs/gromacs-2019.6-r2.ebuild b/sci-chemistry/gromacs/gromacs-2019.6-r2.ebuild index 991c92890086..ea9f998593a4 100644 --- a/sci-chemistry/gromacs/gromacs-2019.6-r2.ebuild +++ b/sci-chemistry/gromacs/gromacs-2019.6-r2.ebuild @@ -50,6 +50,7 @@ RDEPEND="${CDEPEND}" REQUIRED_USE=" || ( single-precision double-precision ) cuda? ( single-precision ) + opencl? ( single-precision ) cuda? ( !opencl ) mkl? ( !blas !fftw !lapack ) ${PYTHON_REQUIRED_USE}" diff --git a/sci-chemistry/gromacs/gromacs-2020.4-r1.ebuild b/sci-chemistry/gromacs/gromacs-2020.4-r1.ebuild index 78df12fce7b2..a1a975ee8107 100644 --- a/sci-chemistry/gromacs/gromacs-2020.4-r1.ebuild +++ b/sci-chemistry/gromacs/gromacs-2020.4-r1.ebuild @@ -76,6 +76,7 @@ REQUIRED_USE=" || ( single-precision double-precision ) doc? ( !build-manual ) cuda? ( single-precision ) + opencl? ( single-precision ) cuda? ( !opencl ) mkl? ( !blas !fftw !lapack ) ${PYTHON_REQUIRED_USE}" diff --git a/sci-chemistry/gromacs/gromacs-2020.7.ebuild b/sci-chemistry/gromacs/gromacs-2020.7.ebuild index 30ae2a339b00..afbf991e279f 100644 --- a/sci-chemistry/gromacs/gromacs-2020.7.ebuild +++ b/sci-chemistry/gromacs/gromacs-2020.7.ebuild @@ -76,6 +76,7 @@ REQUIRED_USE=" || ( single-precision double-precision ) doc? ( !build-manual ) cuda? ( single-precision ) + opencl? ( single-precision ) cuda? ( !opencl ) mkl? ( !blas !fftw !lapack ) ${PYTHON_REQUIRED_USE}" diff --git a/sci-chemistry/gromacs/gromacs-2021.3-r1.ebuild b/sci-chemistry/gromacs/gromacs-2021.3-r1.ebuild index af9a28c8f506..f55212f3bdc7 100644 --- a/sci-chemistry/gromacs/gromacs-2021.3-r1.ebuild +++ b/sci-chemistry/gromacs/gromacs-2021.3-r1.ebuild @@ -76,6 +76,7 @@ REQUIRED_USE=" || ( single-precision double-precision ) doc? ( !build-manual ) cuda? ( single-precision ) + opencl? ( single-precision ) cuda? ( !opencl ) mkl? ( !blas !fftw !lapack ) ${PYTHON_REQUIRED_USE}" diff --git a/sci-chemistry/gromacs/gromacs-2021.5.ebuild b/sci-chemistry/gromacs/gromacs-2021.5.ebuild index 81c13a98d102..0a8e8fdc1642 100644 --- a/sci-chemistry/gromacs/gromacs-2021.5.ebuild +++ b/sci-chemistry/gromacs/gromacs-2021.5.ebuild @@ -76,6 +76,7 @@ REQUIRED_USE=" || ( single-precision double-precision ) doc? ( !build-manual ) cuda? ( single-precision ) + opencl? ( single-precision )
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gromacs/
commit: 478021fb91ad87a334fe29a1fc584bef7e7e6566 Author: Alexey Shvetsov gentoo org> AuthorDate: Tue Dec 20 21:05:40 2022 + Commit: Alexey Shvetsov gentoo org> CommitDate: Tue Dec 20 21:06:08 2022 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=478021fb sci-chemistry/gromacs: remove mkl-10 hack Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/gromacs/gromacs-2018.8-r1.ebuild | 5 - sci-chemistry/gromacs/gromacs-2019.6-r1.ebuild | 5 - sci-chemistry/gromacs/gromacs-2019.6-r2.ebuild | 5 - sci-chemistry/gromacs/gromacs-2020.4-r1.ebuild | 5 - sci-chemistry/gromacs/gromacs-2020.7.ebuild| 5 - sci-chemistry/gromacs/gromacs-2021.3-r1.ebuild | 5 - sci-chemistry/gromacs/gromacs-2021.5.ebuild| 5 - sci-chemistry/gromacs/gromacs-2021.6.ebuild| 5 - sci-chemistry/gromacs/gromacs-2021..ebuild | 5 - sci-chemistry/gromacs/gromacs-2022.3.ebuild| 5 - sci-chemistry/gromacs/gromacs-2022.4.ebuild| 5 - sci-chemistry/gromacs/gromacs-2022..ebuild | 5 - sci-chemistry/gromacs/gromacs-2023..ebuild | 5 - sci-chemistry/gromacs/gromacs-2023_rc1.ebuild | 5 - sci-chemistry/gromacs/gromacs-.ebuild | 5 - 15 files changed, 75 deletions(-) diff --git a/sci-chemistry/gromacs/gromacs-2018.8-r1.ebuild b/sci-chemistry/gromacs/gromacs-2018.8-r1.ebuild index a26f3ea46d56..8933f1086eac 100644 --- a/sci-chemistry/gromacs/gromacs-2018.8-r1.ebuild +++ b/sci-chemistry/gromacs/gromacs-2018.8-r1.ebuild @@ -106,11 +106,6 @@ src_configure() { if use fftw; then fft_opts=( -DGMX_FFT_LIBRARY=fftw3 ) - elif use mkl && has_version "=sci-libs/mkl-10*"; then - fft_opts=( -DGMX_FFT_LIBRARY=mkl - -DMKL_INCLUDE_DIR="${MKLROOT}/include" - -DMKL_LIBRARIES="$(echo /opt/intel/mkl/10.0.5.025/lib/*/libmkl.so);$(echo /opt/intel/mkl/10.0.5.025/lib/*/libiomp*.so)" - ) elif use mkl; then local bits=$(get_libdir) fft_opts=( -DGMX_FFT_LIBRARY=mkl diff --git a/sci-chemistry/gromacs/gromacs-2019.6-r1.ebuild b/sci-chemistry/gromacs/gromacs-2019.6-r1.ebuild index 1a1a44ea6d18..7999d7a192fd 100644 --- a/sci-chemistry/gromacs/gromacs-2019.6-r1.ebuild +++ b/sci-chemistry/gromacs/gromacs-2019.6-r1.ebuild @@ -109,11 +109,6 @@ src_configure() { if use fftw; then fft_opts=( -DGMX_FFT_LIBRARY=fftw3 ) - elif use mkl && has_version "=sci-libs/mkl-10*"; then - fft_opts=( -DGMX_FFT_LIBRARY=mkl - -DMKL_INCLUDE_DIR="${MKLROOT}/include" - -DMKL_LIBRARIES="$(echo /opt/intel/mkl/10.0.5.025/lib/*/libmkl.so);$(echo /opt/intel/mkl/10.0.5.025/lib/*/libiomp*.so)" - ) elif use mkl; then local bits=$(get_libdir) fft_opts=( -DGMX_FFT_LIBRARY=mkl diff --git a/sci-chemistry/gromacs/gromacs-2019.6-r2.ebuild b/sci-chemistry/gromacs/gromacs-2019.6-r2.ebuild index a81288076d3a..991c92890086 100644 --- a/sci-chemistry/gromacs/gromacs-2019.6-r2.ebuild +++ b/sci-chemistry/gromacs/gromacs-2019.6-r2.ebuild @@ -111,11 +111,6 @@ src_configure() { if use fftw; then fft_opts=( -DGMX_FFT_LIBRARY=fftw3 ) - elif use mkl && has_version "=sci-libs/mkl-10*"; then - fft_opts=( -DGMX_FFT_LIBRARY=mkl - -DMKL_INCLUDE_DIR="${MKLROOT}/include" - -DMKL_LIBRARIES="$(echo /opt/intel/mkl/10.0.5.025/lib/*/libmkl.so);$(echo /opt/intel/mkl/10.0.5.025/lib/*/libiomp*.so)" - ) elif use mkl; then local bits=$(get_libdir) fft_opts=( -DGMX_FFT_LIBRARY=mkl diff --git a/sci-chemistry/gromacs/gromacs-2020.4-r1.ebuild b/sci-chemistry/gromacs/gromacs-2020.4-r1.ebuild index 1b2e86c8a65f..78df12fce7b2 100644 --- a/sci-chemistry/gromacs/gromacs-2020.4-r1.ebuild +++ b/sci-chemistry/gromacs/gromacs-2020.4-r1.ebuild @@ -181,11 +181,6 @@ src_configure() { if use fftw; then fft_opts=( -DGMX_FFT_LIBRARY=fftw3 ) - elif use mkl && has_version "=sci-libs/mkl-10*"; then - fft_opts=( -DGMX_FFT_LIBRARY=mkl - -DMKL_INCLUDE_DIR="${MKLROOT}/include" - -DMKL_LIBRARIES="$(echo /opt/intel/mkl/10.0.5.025/lib/*/libmkl.so);$(echo /opt/intel/mkl/10.0.5.025/lib/*/libiomp*.so)" - ) elif use mkl; then local bits=$(get_libdir) fft_opts=( -DGMX_FFT_LIBRARY=mkl diff --git a/sci-chemistry/gromacs/gromacs-2020.7.ebuild b/sci-chemistry/gromacs/gromacs-2020.7.ebuild index 9af3d2969914..30ae2a339b00 100644 --- a/sci-chemistry/gromacs/gromacs-2020.7.ebuild +++ b/sci-chemistry/g
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gromacs/
commit: 7b6d46ff9ff7cc9ea88b1033c7a17be52cd2dbce Author: Alexey Shvetsov gentoo org> AuthorDate: Tue Dec 20 20:50:46 2022 + Commit: Alexey Shvetsov gentoo org> CommitDate: Tue Dec 20 20:51:23 2022 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=7b6d46ff sci-chemistry/gromacs: Make all uris https Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/gromacs/Manifest | 2 +- sci-chemistry/gromacs/gromacs-2018.8-r1.ebuild | 6 +++--- sci-chemistry/gromacs/gromacs-2019.6-r1.ebuild | 8 +++ sci-chemistry/gromacs/gromacs-2019.6-r2.ebuild | 8 +++ sci-chemistry/gromacs/gromacs-2020.4-r1.ebuild | 6 +++--- sci-chemistry/gromacs/gromacs-2020.7.ebuild| 6 +++--- sci-chemistry/gromacs/gromacs-2021.3-r1.ebuild | 6 +++--- sci-chemistry/gromacs/gromacs-2021.5.ebuild| 6 +++--- sci-chemistry/gromacs/gromacs-2021.6.ebuild| 6 +++--- sci-chemistry/gromacs/gromacs-2021..ebuild | 6 +++--- sci-chemistry/gromacs/gromacs-2022.3.ebuild| 6 +++--- sci-chemistry/gromacs/gromacs-2022.4.ebuild| 6 +++--- sci-chemistry/gromacs/gromacs-2022..ebuild | 28 ++-- sci-chemistry/gromacs/gromacs-2023..ebuild | 30 -- sci-chemistry/gromacs/gromacs-2023_rc1.ebuild | 30 -- sci-chemistry/gromacs/gromacs-.ebuild | 30 -- 16 files changed, 127 insertions(+), 63 deletions(-) diff --git a/sci-chemistry/gromacs/Manifest b/sci-chemistry/gromacs/Manifest index af8f062468c0..48bb6ecb5abb 100644 --- a/sci-chemistry/gromacs/Manifest +++ b/sci-chemistry/gromacs/Manifest @@ -17,7 +17,7 @@ DIST manual-2021.5.pdf 12253641 BLAKE2B 8850715a2bb21345e1c9735aca1a5dd2ad916e5a DIST manual-2021.6.pdf 12256595 BLAKE2B 5d808e38571b38c1f6e0d115f6e604238206cc001f59d05ed855e80c324c0e6fd7767adb723b3d0edd1267ae5973a3b83b76bd04d2dc99769e6440600d8e2146 SHA512 64fe56422d7417f6f61b10346c99e24c3f423f0cedc3794e0809250282bc87ef692b47ae6c3f95ad7994aa3860ed82035cbacc76eb78a2f54a29052a05260af2 DIST manual-2022.3.pdf 13080874 BLAKE2B 3e70da8f70281c78084f5f9af86cdcda187c7b3085f08d95487992a65e31b7dae0b3e66d914dc0bccaf1bfe4c672d2018f38d0bde679759545aca55d1df1f554 SHA512 f634eac722d4a6f77820ef46024d9209de97fb6afb52333f200c2717049d8d09e31f0ef7bac8f154d79ae43fa31541ed6c3d839dd088433222ebdace298b5fae DIST manual-2022.4.pdf 13080976 BLAKE2B 45685fa1d727aa30425e946ac72e0bd723528032e3fb45525d3c025316ee2682ea3c9cc2fd75b5cd4e900adbc6e7f577e3368d9e0681294fd1515df3d2e5d840 SHA512 a7ac3a80a90f14b6917e15633d77230d24cdcf19ade38d14b35c6451074848a7754b33c612e2a26a657f2edd3d6710e5a8130cacb107d4085d1bd934267ad623 -DIST manual-2023_rc1.pdf 13506754 BLAKE2B 9487753e788fa5b2d01255717769e0b01cf7adcb4ae99a1f37f4ad0f8acccfbf4eff0a4c76add63bc82bffdf844cf8dd1d858d15a6bacd6635ec3a3474e10f6f SHA512 f26df914402793c656a798847524c0b9207a4163bb36d6cb90740a699418719f7b124343b4886e50d92023c14f8c1e61e950c12b8e1e4702007e34677cd17ef2 +DIST manual-2023-rc1.pdf 13506754 BLAKE2B 9487753e788fa5b2d01255717769e0b01cf7adcb4ae99a1f37f4ad0f8acccfbf4eff0a4c76add63bc82bffdf844cf8dd1d858d15a6bacd6635ec3a3474e10f6f SHA512 f26df914402793c656a798847524c0b9207a4163bb36d6cb90740a699418719f7b124343b4886e50d92023c14f8c1e61e950c12b8e1e4702007e34677cd17ef2 DIST regressiontests-2018.8.tar.gz 67855469 BLAKE2B 34c9b339f6229f483afbb5192ee6ba8b8f72d5c26907a853af9c53dfece0d88739e48f6b44b78d1c010f988f9385d077285300522164f533a5861e9dda879275 SHA512 3642389d27bd1942cd0f091c940ae97b197b94856a387fe581dc516b0d4169480f16551d4ba357f9282b3337d605c286d51dd38112ac87c826dda634904836bb DIST regressiontests-2019.6.tar.gz 67643195 BLAKE2B 1e054e24b187946f7ea28090d4f20cf8e1d79a26253f57ba07d130e0773d8541b8a1552a38023d31a68ce8bc62d8e0af1d98609234bb3e7d3e6d567307ebb386 SHA512 eacf1c55b982515a305c29459fe80a7cd558a8481e5689962aa956148af542568b1d1ce59c6784ecb0afd4768c2b664afa21e12af2d89ae2b06b1ba61ad72036 DIST regressiontests-2020.4.tar.gz 48542144 BLAKE2B 1dcde67525d40ababa74d9e8ba2dd3fdef1de7d1018491e102edd71d3a622925f213b5a0812e5448882b4cb5fb578317e8e5029bdc4bd53008aa8441a3d9dea1 SHA512 7c71f36a1cef22562f14dcd233e90ad2fe370ae1a7d3b5268727259b374e12d4754253735ac8745d3738bdbc1cc2067780fda5e393be2ff264f632fe4e0c1978 diff --git a/sci-chemistry/gromacs/gromacs-2018.8-r1.ebuild b/sci-chemistry/gromacs/gromacs-2018.8-r1.ebuild index fb79ed729b5a..a26f3ea46d56 100644 --- a/sci-chemistry/gromacs/gromacs-2018.8-r1.ebuild +++ b/sci-chemistry/gromacs/gromacs-2018.8-r1.ebuild @@ -8,15 +8,15 @@ CMAKE_MAKEFILE_GENERATOR="ninja" inherit bash-completion-r1 cmake cuda readme.gentoo-r1 toolchain-funcs xdg-utils SRC_URI=" - http://ftp.gromacs.org/gromacs/${PN}-${PV/_/-}.tar.gz - doc? ( http://ftp.gromacs.org/manual/manual-${PV/_/-}.pdf ) + https://ftp.gromacs.org/gromacs/${PN}-${PV/_/-}.tar.gz + doc? ( https://ftp.gromacs.org/manual/manual-${PV/_/-}.pdf ) test? (
[gentoo-commits] repo/gentoo:master commit in: dev-cpp/muParser/
commit: 71112de50094452f8454ace5619db6e471a56398 Author: Alexey Shvetsov gentoo org> AuthorDate: Tue Dec 20 18:38:37 2022 + Commit: Alexey Shvetsov gentoo org> CommitDate: Tue Dec 20 18:38:37 2022 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=71112de5 dev-cpp/muParser: add 2.3.4 Signed-off-by: Alexey Shvetsov gentoo.org> dev-cpp/muParser/Manifest | 1 + dev-cpp/muParser/muParser-2.3.4.ebuild | 36 ++ 2 files changed, 37 insertions(+) diff --git a/dev-cpp/muParser/Manifest b/dev-cpp/muParser/Manifest index 2a400643c4b5..71a9a28a4c96 100644 --- a/dev-cpp/muParser/Manifest +++ b/dev-cpp/muParser/Manifest @@ -1,2 +1,3 @@ DIST muParser-2.3.2.tar.gz 103979 BLAKE2B f892b4d440a1b7326be27aa0a2b703ccafc02de5e881ef4780e8907688cf7905284f3e5f5855ad2596683f1dad309d287ebae527d917ebf5e0dad045551df7de SHA512 8ef5c8b3834da3995a782b7364a4eb4197fb706bee4cadabe5511d2a9cf2912c3db6de422a91eff7f9690f8c9c355b9900335e940749d5c243cb732ac1992aef DIST muParser-2.3.3.tar.gz 112100 BLAKE2B 79a0a29781596f114aeea9756a5a2141eed19857c08d0a32093353eb049f8b179af577cbd07747d2b8093e448714397b47f36c68e54bbce22386f5ec06365bda SHA512 f7e01c83f6ffe71e240653c47fdb8f3152d7fdf61b5997a3c717dec50d0175065c4fc4241ec95fb35b60b968c5c965a820009163ebe84f0fa57d64b3a23226b4 +DIST muParser-2.3.4.tar.gz 112693 BLAKE2B 860c24d45140ad4339efcd5f5c221454c051565a1362907fd01499cfda0ef3c304333507c4d9c43644dac63e5fb4963fef6e3a2e565febf1a80807e0a0242c87 SHA512 5226fd666eaf3ff7e661bbf72e60114d0ceed10491ffa4ed2dd34cd669c6c21c037eff0388402d6b9d60b0a5a27b03ca35153e0c048328abc75dfd1eaf38ceca diff --git a/dev-cpp/muParser/muParser-2.3.4.ebuild b/dev-cpp/muParser/muParser-2.3.4.ebuild new file mode 100644 index ..4dd7dfcdf406 --- /dev/null +++ b/dev-cpp/muParser/muParser-2.3.4.ebuild @@ -0,0 +1,36 @@ +# Copyright 1999-2022 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +inherit cmake + +DESCRIPTION="Library for parsing mathematical expressions" +HOMEPAGE="https://beltoforion.de/en/muparser/"; +SRC_URI="https://github.com/beltoforion/muparser/archive/refs/tags/v${PV}.tar.gz -> ${P}.tar.gz" +S="${WORKDIR}"/muparser-${PV} + +LICENSE="MIT" +SLOT="0" +KEYWORDS="~amd64 ~arm ~arm64 ~loong ~ppc ~ppc64 ~riscv ~x86 ~amd64-linux ~x86-linux ~ppc-macos" +IUSE="doc openmp test wchar" +RESTRICT="!test? ( test )" + +PATCHES=( +) + +src_configure() { + mycmakeargs=( + -DENABLE_OPENMP=$(usex openmp) + -DENABLE_WIDE_CHAR=$(usex wchar) + ) + cmake_src_configure +} + +src_test() { + cmake_src_compile test +} + +src_install() { + cmake_src_install +}
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gromacs/
commit: 258d48996c52975fa030245594900377718aded6 Author: Alexey Shvetsov gentoo org> AuthorDate: Tue Dec 20 18:40:08 2022 + Commit: Alexey Shvetsov gentoo org> CommitDate: Tue Dec 20 18:40:08 2022 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=258d4899 sci-chemistry/gromacs: Add 2023.x release series Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/gromacs/Manifest | 3 +++ .../gromacs/{gromacs-.ebuild => gromacs-2023..ebuild} | 6 ++ .../gromacs/{gromacs-.ebuild => gromacs-2023_rc1.ebuild}| 6 ++ sci-chemistry/gromacs/gromacs-.ebuild | 6 ++ 4 files changed, 9 insertions(+), 12 deletions(-) diff --git a/sci-chemistry/gromacs/Manifest b/sci-chemistry/gromacs/Manifest index dfce80d8c894..af8f062468c0 100644 --- a/sci-chemistry/gromacs/Manifest +++ b/sci-chemistry/gromacs/Manifest @@ -7,6 +7,7 @@ DIST gromacs-2021.5.tar.gz 38023772 BLAKE2B 45e1f080b86626423e471f06b48b615db191 DIST gromacs-2021.6.tar.gz 38012702 BLAKE2B 023ae37dc53643758afa050fd179cd66f3c6d6266f6afceee5eb35c890a3ae284956f2bc2409156d6e1fa03a7f23f7b04c27e1820547fd5f147b344d94da7d40 SHA512 65d7874e5cd838ce4f29d033c66304738ccc30f1987f9f8541725058b2fc4551302a399f6ce773e81ac9485963187c48feaf92c71789f4c345c82bd335f806a7 DIST gromacs-2022.3.tar.gz 40359623 BLAKE2B 23beacf7208df89aea6c3effe483361451a9ff20428fe79ec163a5eee4dc0db0bb00a2bee84bc9377ad272f216fd372eab1b77e8542ce231ac785b41b582fa15 SHA512 1a6a1674ed17dfd93dcd51537cd13c9df5bb9bd91c3a26601032f83b788a93689bac8070eb8e495a786d41cc9d474885538cbaffa4229da70dfa640ee42b7c60 DIST gromacs-2022.4.tar.gz 40352282 BLAKE2B 616ba05a70a483d7d8fadefb383ac9fc8825ac09ea92f55a0222c57ac91e4a045fb55405ec963303d8dbabb04b3d1f8c73062785b3812b3c6b7582e002dc5538 SHA512 15c642f2b63c1731a01a3b58c13d454f57c29607554a6693c2e62f38da574c6d596c5cb6f361e0feb5e1069b3b19bb49ceaa432c030da91f48e41654e3e6a62f +DIST gromacs-2023-rc1.tar.gz 41863824 BLAKE2B c365ccd83b8f271be8f1a515f4dc0ebd729ce43023e979a52046fc827e786f84f09de894af9b8da4f7ce6e06a1ae050e8ff387892f76787857327ce2bc397042 SHA512 7ab8158624e0c93c0f06bd7023b97012d80afa5e068cb4489e7e9700171a5a8f69ae042bf0256c78aaec527d9a1b88f5f2dce6c8c7d4f46a457b6a9568b70f45 DIST manual-2018.8.pdf 10025023 BLAKE2B afb0a6e6a72d78df743fcb57e7c1716848589e571dd35167b957a9b407ca27978ccfb6cb9e0df9c9439b888f352501a00ba32281ed1e0b4193bd606f1d77152e SHA512 b1972f7ce965bfc9377542993c5943ea4868a8ed23a969d4203264746d6bea3a7a65c6379196ece37fd6d68ec7ec80f827bde87d1049284af7082759a124f1d5 DIST manual-2019.6.pdf 12702376 BLAKE2B c350127bc06a9eb3dee73da39037c84daeb89500e23cb131bd19a150bf60602d4dde7611e0c6f0f344af4093e96a899303dac71b4df56fd0c44c3a48a56606b7 SHA512 dfdff67c2c1c9ce1f1c236b7686c5331b0fe86951da6c98eddd6a3e748815e0be0a9653ae4318469fcdd913c4e7c355d64a997cc80b9d9fbe6282ef6d98e61eb DIST manual-2020.4.pdf 11851608 BLAKE2B 7b7bdf08e8946fcc448543b08391b94a67fee60a8c810597c1f09f70443f9d7db817c99622dd0c21c6317f5fdcd6c4a88589ecac57055cb0cd8597d6021026e7 SHA512 928555663c77de36393e625c29d388d4e1c8c1298e7a993d871839e0d4d8d18d190221ad8f1d975bd072bdd6a061e9ea5b9295f2ecf45f24b6523ea5ea290fed @@ -16,6 +17,7 @@ DIST manual-2021.5.pdf 12253641 BLAKE2B 8850715a2bb21345e1c9735aca1a5dd2ad916e5a DIST manual-2021.6.pdf 12256595 BLAKE2B 5d808e38571b38c1f6e0d115f6e604238206cc001f59d05ed855e80c324c0e6fd7767adb723b3d0edd1267ae5973a3b83b76bd04d2dc99769e6440600d8e2146 SHA512 64fe56422d7417f6f61b10346c99e24c3f423f0cedc3794e0809250282bc87ef692b47ae6c3f95ad7994aa3860ed82035cbacc76eb78a2f54a29052a05260af2 DIST manual-2022.3.pdf 13080874 BLAKE2B 3e70da8f70281c78084f5f9af86cdcda187c7b3085f08d95487992a65e31b7dae0b3e66d914dc0bccaf1bfe4c672d2018f38d0bde679759545aca55d1df1f554 SHA512 f634eac722d4a6f77820ef46024d9209de97fb6afb52333f200c2717049d8d09e31f0ef7bac8f154d79ae43fa31541ed6c3d839dd088433222ebdace298b5fae DIST manual-2022.4.pdf 13080976 BLAKE2B 45685fa1d727aa30425e946ac72e0bd723528032e3fb45525d3c025316ee2682ea3c9cc2fd75b5cd4e900adbc6e7f577e3368d9e0681294fd1515df3d2e5d840 SHA512 a7ac3a80a90f14b6917e15633d77230d24cdcf19ade38d14b35c6451074848a7754b33c612e2a26a657f2edd3d6710e5a8130cacb107d4085d1bd934267ad623 +DIST manual-2023_rc1.pdf 13506754 BLAKE2B 9487753e788fa5b2d01255717769e0b01cf7adcb4ae99a1f37f4ad0f8acccfbf4eff0a4c76add63bc82bffdf844cf8dd1d858d15a6bacd6635ec3a3474e10f6f SHA512 f26df914402793c656a798847524c0b9207a4163bb36d6cb90740a699418719f7b124343b4886e50d92023c14f8c1e61e950c12b8e1e4702007e34677cd17ef2 DIST regressiontests-2018.8.tar.gz 67855469 BLAKE2B 34c9b339f6229f483afbb5192ee6ba8b8f72d5c26907a853af9c53dfece0d88739e48f6b44b78d1c010f988f9385d077285300522164f533a5861e9dda879275 SHA512 3642389d27bd1942cd0f091c940ae97b197b94856a387fe581dc516b0d4169480f16551d4ba357f9282b3337d605c286d51dd38112ac87c826dda634904836bb DIST regressiontests-2019.6.tar.gz 6
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gromacs/
commit: 47b82f89a877ec68759c5a488473875e8184cc1a Author: Alexey Shvetsov gentoo org> AuthorDate: Tue Dec 20 18:23:24 2022 + Commit: Alexey Shvetsov gentoo org> CommitDate: Tue Dec 20 18:24:57 2022 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=47b82f89 sci-chemistry/gromacs: Fix pep517 Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/gromacs/gromacs-2020.4-r1.ebuild | 3 ++- sci-chemistry/gromacs/gromacs-2020.7.ebuild| 3 ++- sci-chemistry/gromacs/gromacs-2021.3-r1.ebuild | 3 ++- sci-chemistry/gromacs/gromacs-2021.5.ebuild| 3 ++- sci-chemistry/gromacs/gromacs-2021.6.ebuild| 3 ++- sci-chemistry/gromacs/gromacs-2021..ebuild | 3 ++- sci-chemistry/gromacs/gromacs-.ebuild | 3 ++- 7 files changed, 14 insertions(+), 7 deletions(-) diff --git a/sci-chemistry/gromacs/gromacs-2020.4-r1.ebuild b/sci-chemistry/gromacs/gromacs-2020.4-r1.ebuild index 178926f0014d..90ca3b46ae0a 100644 --- a/sci-chemistry/gromacs/gromacs-2020.4-r1.ebuild +++ b/sci-chemistry/gromacs/gromacs-2020.4-r1.ebuild @@ -7,7 +7,8 @@ CMAKE_MAKEFILE_GENERATOR="ninja" PYTHON_COMPAT=( python3_{8..11} ) -DISTUTILS_USE_SETUPTOOLS=no +DISTUTILS_OPTIONAL=1 +DISTUTILS_USE_PEP517=no DISTUTILS_SINGLE_IMPL=1 inherit bash-completion-r1 cmake cuda distutils-r1 flag-o-matic readme.gentoo-r1 toolchain-funcs xdg-utils diff --git a/sci-chemistry/gromacs/gromacs-2020.7.ebuild b/sci-chemistry/gromacs/gromacs-2020.7.ebuild index de3335b0e75c..ef73982121ff 100644 --- a/sci-chemistry/gromacs/gromacs-2020.7.ebuild +++ b/sci-chemistry/gromacs/gromacs-2020.7.ebuild @@ -7,7 +7,8 @@ CMAKE_MAKEFILE_GENERATOR="ninja" PYTHON_COMPAT=( python3_{8..11} ) -DISTUTILS_USE_SETUPTOOLS=no +DISTUTILS_OPTIONAL=1 +DISTUTILS_USE_PEP517=no DISTUTILS_SINGLE_IMPL=1 inherit bash-completion-r1 cmake cuda distutils-r1 flag-o-matic readme.gentoo-r1 toolchain-funcs xdg-utils diff --git a/sci-chemistry/gromacs/gromacs-2021.3-r1.ebuild b/sci-chemistry/gromacs/gromacs-2021.3-r1.ebuild index 68d9a92c288d..c8f88acab2c3 100644 --- a/sci-chemistry/gromacs/gromacs-2021.3-r1.ebuild +++ b/sci-chemistry/gromacs/gromacs-2021.3-r1.ebuild @@ -7,7 +7,8 @@ CMAKE_MAKEFILE_GENERATOR="ninja" PYTHON_COMPAT=( python3_{8..11} ) -DISTUTILS_USE_SETUPTOOLS=no +DISTUTILS_OPTIONAL=1 +DISTUTILS_USE_PEP517=no DISTUTILS_SINGLE_IMPL=1 inherit bash-completion-r1 cmake cuda distutils-r1 flag-o-matic readme.gentoo-r1 toolchain-funcs xdg-utils diff --git a/sci-chemistry/gromacs/gromacs-2021.5.ebuild b/sci-chemistry/gromacs/gromacs-2021.5.ebuild index 2f7f4f77115a..c3df9c15d1d4 100644 --- a/sci-chemistry/gromacs/gromacs-2021.5.ebuild +++ b/sci-chemistry/gromacs/gromacs-2021.5.ebuild @@ -7,7 +7,8 @@ CMAKE_MAKEFILE_GENERATOR="ninja" PYTHON_COMPAT=( python3_{8..11} ) -DISTUTILS_USE_SETUPTOOLS=no +DISTUTILS_OPTIONAL=1 +DISTUTILS_USE_PEP517=no DISTUTILS_SINGLE_IMPL=1 inherit bash-completion-r1 cmake cuda distutils-r1 flag-o-matic readme.gentoo-r1 toolchain-funcs xdg-utils diff --git a/sci-chemistry/gromacs/gromacs-2021.6.ebuild b/sci-chemistry/gromacs/gromacs-2021.6.ebuild index 2f7f4f77115a..c3df9c15d1d4 100644 --- a/sci-chemistry/gromacs/gromacs-2021.6.ebuild +++ b/sci-chemistry/gromacs/gromacs-2021.6.ebuild @@ -7,7 +7,8 @@ CMAKE_MAKEFILE_GENERATOR="ninja" PYTHON_COMPAT=( python3_{8..11} ) -DISTUTILS_USE_SETUPTOOLS=no +DISTUTILS_OPTIONAL=1 +DISTUTILS_USE_PEP517=no DISTUTILS_SINGLE_IMPL=1 inherit bash-completion-r1 cmake cuda distutils-r1 flag-o-matic readme.gentoo-r1 toolchain-funcs xdg-utils diff --git a/sci-chemistry/gromacs/gromacs-2021..ebuild b/sci-chemistry/gromacs/gromacs-2021..ebuild index af0fa65d05eb..44a39087816b 100644 --- a/sci-chemistry/gromacs/gromacs-2021..ebuild +++ b/sci-chemistry/gromacs/gromacs-2021..ebuild @@ -7,7 +7,8 @@ CMAKE_MAKEFILE_GENERATOR="ninja" PYTHON_COMPAT=( python3_{8..11} ) -DISTUTILS_USE_SETUPTOOLS=no +DISTUTILS_OPTIONAL=1 +DISTUTILS_USE_PEP517=no DISTUTILS_SINGLE_IMPL=1 inherit bash-completion-r1 cmake cuda distutils-r1 flag-o-matic readme.gentoo-r1 toolchain-funcs xdg-utils diff --git a/sci-chemistry/gromacs/gromacs-.ebuild b/sci-chemistry/gromacs/gromacs-.ebuild index 2b70114b7ade..f8165b39b590 100644 --- a/sci-chemistry/gromacs/gromacs-.ebuild +++ b/sci-chemistry/gromacs/gromacs-.ebuild @@ -7,7 +7,8 @@ CMAKE_MAKEFILE_GENERATOR="ninja" PYTHON_COMPAT=( python3_{8..11} ) -DISTUTILS_USE_SETUPTOOLS=no +DISTUTILS_OPTIONAL=1 +DISTUTILS_USE_PEP517=no DISTUTILS_SINGLE_IMPL=1 inherit bash-completion-r1 cmake cuda distutils-r1 flag-o-matic readme.gentoo-r1 toolchain-funcs xdg-utils
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gromacs/
commit: 8c604a370a315f2fe7ba2c9d128c21b760773c35 Author: Alexey Shvetsov gentoo org> AuthorDate: Tue Dec 20 18:17:10 2022 + Commit: Alexey Shvetsov gentoo org> CommitDate: Tue Dec 20 18:24:30 2022 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=8c604a37 sci-chemistry/gromacs: Add 2022.4 and fix pep517 Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/gromacs/Manifest | 6 +++--- sci-chemistry/gromacs/gromacs-2022.3.ebuild | 3 ++- .../gromacs/{gromacs-2022.2.ebuild => gromacs-2022.4.ebuild}| 3 ++- sci-chemistry/gromacs/gromacs-2022..ebuild | 3 ++- 4 files changed, 9 insertions(+), 6 deletions(-) diff --git a/sci-chemistry/gromacs/Manifest b/sci-chemistry/gromacs/Manifest index f999c8f5def4..dfce80d8c894 100644 --- a/sci-chemistry/gromacs/Manifest +++ b/sci-chemistry/gromacs/Manifest @@ -5,8 +5,8 @@ DIST gromacs-2020.7.tar.gz 29175554 BLAKE2B 98f1aa415946f8eb113febc81105f0c1b091 DIST gromacs-2021.3.tar.gz 37987972 BLAKE2B d71995c7d5a34978246e33dc637ac3d273e547afcf72d1a107026650f03286ecdf27e4b9a70113b3c3a01af59ad49ac5c813aa6e5d2e8eb29fd05582a7a28d34 SHA512 da420917d06de2e192dfbb4e1b9f46989ed05b5c7e641c657104ed8f2bd8b22509bffd1ecfd7c965c80544eafa6af12d6d0aba7e1e7d9d14a4a88fb3fbf394a5 DIST gromacs-2021.5.tar.gz 38023772 BLAKE2B 45e1f080b86626423e471f06b48b615db1913048f9f6998da8ce45408339b32f829d33dd2af57297a7d307fcffd556c333a58c309ee0f2adb021ca3755619b05 SHA512 56c1b312fc8e52ec6f86e445d2fa2d07107c461b35d4dc8cdf95580f05fd8e6c5fd671d0e72b2b9e74e3232bc8c41db496fe4bcaf2b9a3ae3c2cfa93489a31c5 DIST gromacs-2021.6.tar.gz 38012702 BLAKE2B 023ae37dc53643758afa050fd179cd66f3c6d6266f6afceee5eb35c890a3ae284956f2bc2409156d6e1fa03a7f23f7b04c27e1820547fd5f147b344d94da7d40 SHA512 65d7874e5cd838ce4f29d033c66304738ccc30f1987f9f8541725058b2fc4551302a399f6ce773e81ac9485963187c48feaf92c71789f4c345c82bd335f806a7 -DIST gromacs-2022.2.tar.gz 40350604 BLAKE2B 789c8abc13b5c64af6b9d66efcf70449330b7e6a4bc127ba299e36eea925e9485809c11480ffd857805d9b453df363ce9bb05bc54b439801334767651defc0ef SHA512 9f33518d2035afb37fc40377e575d497ff32bef2adb702669b35b1b51b1694b1113c5634fa6febd41955b6dfbfd055e7d523e1919bda1bf169a6d0c25700cef7 DIST gromacs-2022.3.tar.gz 40359623 BLAKE2B 23beacf7208df89aea6c3effe483361451a9ff20428fe79ec163a5eee4dc0db0bb00a2bee84bc9377ad272f216fd372eab1b77e8542ce231ac785b41b582fa15 SHA512 1a6a1674ed17dfd93dcd51537cd13c9df5bb9bd91c3a26601032f83b788a93689bac8070eb8e495a786d41cc9d474885538cbaffa4229da70dfa640ee42b7c60 +DIST gromacs-2022.4.tar.gz 40352282 BLAKE2B 616ba05a70a483d7d8fadefb383ac9fc8825ac09ea92f55a0222c57ac91e4a045fb55405ec963303d8dbabb04b3d1f8c73062785b3812b3c6b7582e002dc5538 SHA512 15c642f2b63c1731a01a3b58c13d454f57c29607554a6693c2e62f38da574c6d596c5cb6f361e0feb5e1069b3b19bb49ceaa432c030da91f48e41654e3e6a62f DIST manual-2018.8.pdf 10025023 BLAKE2B afb0a6e6a72d78df743fcb57e7c1716848589e571dd35167b957a9b407ca27978ccfb6cb9e0df9c9439b888f352501a00ba32281ed1e0b4193bd606f1d77152e SHA512 b1972f7ce965bfc9377542993c5943ea4868a8ed23a969d4203264746d6bea3a7a65c6379196ece37fd6d68ec7ec80f827bde87d1049284af7082759a124f1d5 DIST manual-2019.6.pdf 12702376 BLAKE2B c350127bc06a9eb3dee73da39037c84daeb89500e23cb131bd19a150bf60602d4dde7611e0c6f0f344af4093e96a899303dac71b4df56fd0c44c3a48a56606b7 SHA512 dfdff67c2c1c9ce1f1c236b7686c5331b0fe86951da6c98eddd6a3e748815e0be0a9653ae4318469fcdd913c4e7c355d64a997cc80b9d9fbe6282ef6d98e61eb DIST manual-2020.4.pdf 11851608 BLAKE2B 7b7bdf08e8946fcc448543b08391b94a67fee60a8c810597c1f09f70443f9d7db817c99622dd0c21c6317f5fdcd6c4a88589ecac57055cb0cd8597d6021026e7 SHA512 928555663c77de36393e625c29d388d4e1c8c1298e7a993d871839e0d4d8d18d190221ad8f1d975bd072bdd6a061e9ea5b9295f2ecf45f24b6523ea5ea290fed @@ -14,8 +14,8 @@ DIST manual-2020.7.pdf 11850780 BLAKE2B 38594e87993badfbbcf47d6010a7f67d3c3426da DIST manual-2021.3.pdf 12255076 BLAKE2B 6ca516b6832507c9d4100679d1f9bc9e3ab17d226849b050764b0d0626247dc57ce49985f9a7fc0061f3df278923a83faa367ca8ab91c37e5624dc584a51a822 SHA512 5d53798f30ea00fcb4e1b35f7eaa4bebfc05dafa4f2d0c197dcf2b57a624ad3a98b74fd90722e40d0ac13a6fff4ca231f9d6340f52ba94659c827c53c2f1cb16 DIST manual-2021.5.pdf 12253641 BLAKE2B 8850715a2bb21345e1c9735aca1a5dd2ad916e5a18881e7c9f3dda6f055ca12d9d379b74218138999ce50769efd8b9dd6447afbf70bbbefa2564dfb9fb276b91 SHA512 7635108c935e4953d722df6a16ee43edf97eef7e49f047218728f68f61f8f185192ff1d8b13a573b643b040955af211355a7b560c8a894c858d7f71249d41296 DIST manual-2021.6.pdf 12256595 BLAKE2B 5d808e38571b38c1f6e0d115f6e604238206cc001f59d05ed855e80c324c0e6fd7767adb723b3d0edd1267ae5973a3b83b76bd04d2dc99769e6440600d8e2146 SHA512 64fe56422d7417f6f61b10346c99e24c3f423f0cedc3794e0809250282bc87ef692b47ae6c3f95ad7994aa3860ed82035cbacc76eb78a2f54a29052a05260af2 -DIST manual-2022.2.pdf 1307
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/GromacsWrapper/
commit: 535b60e5c35c65b15ddcd66739871003be0cb837 Author: Alexey Shvetsov gentoo org> AuthorDate: Sat Oct 29 15:03:32 2022 + Commit: Alexey Shvetsov gentoo org> CommitDate: Sat Oct 29 15:03:56 2022 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=535b60e5 sci-chemistry/GromacsWrapper: add 0.8.2, drop 0.8.0-r1 Signed-off-by: Alexey Shvetsov gentoo.org> ...GromacsWrapper-0.8.0-r1.ebuild => GromacsWrapper-0.8.2.ebuild} | 8 ++-- sci-chemistry/GromacsWrapper/Manifest | 2 +- 2 files changed, 3 insertions(+), 7 deletions(-) diff --git a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0-r1.ebuild b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.2.ebuild similarity index 85% rename from sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0-r1.ebuild rename to sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.2.ebuild index e6354fb05f92..e1c1cccae2b8 100644 --- a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0-r1.ebuild +++ b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.2.ebuild @@ -3,7 +3,8 @@ EAPI=7 -PYTHON_COMPAT=( python3_{7..10} ) +PYTHON_COMPAT=( python3_{8..10} ) +DISTUTILS_USE_PEP517=setuptools if [[ ${PV} = ** ]]; then scm_eclass=git-r3 @@ -37,8 +38,3 @@ BDEPEND=" " distutils_enable_tests pytest - -PATCHES=( - # https://github.com/Becksteinlab/GromacsWrapper/issues/182 - "${FILESDIR}"/${P}-tests-package.patch -) diff --git a/sci-chemistry/GromacsWrapper/Manifest b/sci-chemistry/GromacsWrapper/Manifest index 693953f072e3..38f5f6269fbc 100644 --- a/sci-chemistry/GromacsWrapper/Manifest +++ b/sci-chemistry/GromacsWrapper/Manifest @@ -1 +1 @@ -DIST GromacsWrapper-0.8.0.tar.gz 1205837 BLAKE2B 3627e56df0dc6ba86caac67795416c7c8c187aaa4fac545600d17dcd799cb153feaab61a0f0632e051c4e9c0b4cd74f8e165156873e36bc53571bec78e5fca61 SHA512 da7215216c9a2b52094bb7e43e04f1b429c4893ba67b4bd850fe68e99f338813392fd9d0aa1b19d3398c694be964bc2badbf1b3623420da929ee4abcef18026f +DIST GromacsWrapper-0.8.2.tar.gz 1954926 BLAKE2B c05995667f925a7519e07e59519e985693effa2fd511d228d236bff978d05430d422003e1360f9fda26564e40bb69183ae8e9b7334e0427c2b177f019df38a6a SHA512 b8a3e7da43eaabaf0fe12f4c06ff80f018847f9386c16eb66c96b3840c66b79d02ee47e675c08ed81df0ef495261c3b557d64c62caac0e484f661ef6b3a5be73
[gentoo-commits] repo/gentoo:master commit in: dev-perl/Net-AMQP-RabbitMQ/
commit: 0c40cfcf4461b8fcbb4c2d039b9418b5d1e63554 Author: Alexey Shvetsov gentoo org> AuthorDate: Tue Oct 25 22:20:36 2022 + Commit: Alexey Shvetsov gentoo org> CommitDate: Tue Oct 25 22:20:36 2022 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=0c40cfcf dev-perl/Net-AMQP-RabbitMQ: add 2.40010 Signed-off-by: Alexey Shvetsov gentoo.org> dev-perl/Net-AMQP-RabbitMQ/Manifest| 1 + .../Net-AMQP-RabbitMQ-2.40010.ebuild | 48 ++ 2 files changed, 49 insertions(+) diff --git a/dev-perl/Net-AMQP-RabbitMQ/Manifest b/dev-perl/Net-AMQP-RabbitMQ/Manifest index c38c9defff69..64c40a0efaaf 100644 --- a/dev-perl/Net-AMQP-RabbitMQ/Manifest +++ b/dev-perl/Net-AMQP-RabbitMQ/Manifest @@ -1 +1,2 @@ DIST Net-AMQP-RabbitMQ-2.40009.tar.gz 198363 BLAKE2B 35aea3ba96b6b9cfaf8b8fa14d2a00326e4d64cc74d438ab59b6773f7ce67fd2ea7ded91a487eb20cdbe174c68825434839a8d7afb8e764e4a228e7088bba875 SHA512 2c0f53d59858e777fbc712c3bd06e3464783559dd9424c58a8fe586747e1d43aa4a607268484ec8bf4f10e979788ed5ea9558208096187c6e0c12a473e465459 +DIST Net-AMQP-RabbitMQ-2.40010.tar.gz 206449 BLAKE2B c7b3e8b9841fb10519da063088dd1f8b2aa9791d459ce88198610394d284c182147f22bf260c7291e36a9b56903499bc43991d029e02ff009709b38557b43bff SHA512 1e0256a3903379031059723ca0d11182ed4ef5a4ae4053d47f57ae1d4c5f42b3a9c48b7fd3dceb057c492c179bc01484651bb063fb5bca4542185fdca7471b06 diff --git a/dev-perl/Net-AMQP-RabbitMQ/Net-AMQP-RabbitMQ-2.40010.ebuild b/dev-perl/Net-AMQP-RabbitMQ/Net-AMQP-RabbitMQ-2.40010.ebuild new file mode 100644 index ..dc9f888eecc1 --- /dev/null +++ b/dev-perl/Net-AMQP-RabbitMQ/Net-AMQP-RabbitMQ-2.40010.ebuild @@ -0,0 +1,48 @@ +# Copyright 1999-2022 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +DIST_AUTHOR="MSTEMLE" + +inherit perl-module + +DESCRIPTION="interact with RabbitMQ over AMQP using librabbitmq" + +LICENSE="|| ( Artistic GPL-1 GPL-2 GPL-3 )" +SLOT="0" +KEYWORDS="~amd64 ~arm64" +IUSE="test" + +RESTRICT="!test? ( test )" + +RDEPEND=" + >=dev-perl/Math-Int64-0.540.0" + +BDEPEND="${RDEPEND} + >=virtual/perl-ExtUtils-MakeMaker-6.660.0 + test? ( + net-misc/rabbitmq-server + ) +" + +src_test() { + einfo "Starting rabbitmq" + local -x RABBITMQ_LOG_BASE="${T}/rabbitmq/log" + local -x RABBITMQ_MNESIA_BASE="${T}/rabbitmq/mnesia" + local -x RABBITMQ_LOGS="${T}/rabbitmq.log" + local -x RABBITMQ_PID_FILE="${T}/rabbitmq.pid" + local -x RABBITMQ_ENABLED_PLUGINS_FILE="${T}/rabbitmq/enabled_plugins" + /usr/libexec/rabbitmq/rabbitmq-server -p 5672:5672 & + + einfo "Waiting for rabbitmq to fully load" + while ! { echo >/dev/tcp/localhost/5672 ; } &> /dev/null; do + sleep 1 + done + einfo "rabbitmq is ready" + + perl-module_src_test + + einfo "Stopping rabbitmq" + kill "$(<"${RABBITMQ_PID_FILE}")" || die +}
[gentoo-commits] repo/gentoo:master commit in: dev-libs/mmtf-cpp/
commit: 53300d5df05a7e4ef3f80ad7144747e723b84c77 Author: Alexey Shvetsov gentoo org> AuthorDate: Tue Oct 25 22:19:14 2022 + Commit: Alexey Shvetsov gentoo org> CommitDate: Tue Oct 25 22:19:14 2022 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=53300d5d dev-libs/mmtf-cpp: add 1.1.0 Signed-off-by: Alexey Shvetsov gentoo.org> dev-libs/mmtf-cpp/Manifest | 1 + dev-libs/mmtf-cpp/mmtf-cpp-1.1.0.ebuild | 19 +++ 2 files changed, 20 insertions(+) diff --git a/dev-libs/mmtf-cpp/Manifest b/dev-libs/mmtf-cpp/Manifest index db5da6c78af2..4e1801551969 100644 --- a/dev-libs/mmtf-cpp/Manifest +++ b/dev-libs/mmtf-cpp/Manifest @@ -1 +1,2 @@ DIST mmtf-cpp-1.0.0.tar.gz 59363 BLAKE2B afcb03ce1f83e10348b148bd6218e5e10ab3e425b0f8105d292f9e265800ea6ca4562dc11fa4453df05d8a698576fba9dfe982aa91a8dcc1983480c0c52dbcf7 SHA512 0e502ae76e31689d440bff2fbc90fdab7ff62d5369e26f7ab2836966a30bda72625d6d5da33bc0770cf471a1549a02f7478ea16a01dd6be2809568d8daecb073 +DIST mmtf-cpp-1.1.0.tar.gz 106527 BLAKE2B 46f7b44ca6d9096b1f6c7911121d54ab50889c884156724229912bb125492682435d05d93b55b0c8c8025f293eb23f537da4f01a42fe65f4f89270e49429fce7 SHA512 91f30ac1031d71a5358fd83bf864afdac1d1ea758d775811b94a2609be286fcbb7dcfece097c6959afb4f8f9d237b7372183424d4ef211364cc69c08f2cd6e52 diff --git a/dev-libs/mmtf-cpp/mmtf-cpp-1.1.0.ebuild b/dev-libs/mmtf-cpp/mmtf-cpp-1.1.0.ebuild new file mode 100644 index ..c31d0595eb2f --- /dev/null +++ b/dev-libs/mmtf-cpp/mmtf-cpp-1.1.0.ebuild @@ -0,0 +1,19 @@ +# Copyright 2019-2022 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +inherit cmake + +DESCRIPTION="The pure C++ implementation of the MMTF API, decoder and encoder" +HOMEPAGE="https://github.com/rcsb/mmtf-cpp"; +SRC_URI="https://github.com/rcsb/${PN}/archive/v${PV}.tar.gz -> ${P}.tar.gz" + +LICENSE="MIT" +SLOT="0" +KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos" +IUSE="" + +DEPEND="dev-libs/msgpack" +RDEPEND="${DEPEND}" +BDEPEND=""
[gentoo-commits] repo/gentoo:master commit in: dev-cpp/argparse/
commit: b8a373cc0afe6fda5331e3c20118bd89c3e899e7 Author: Alexey Shvetsov gentoo org> AuthorDate: Tue Oct 25 22:17:27 2022 + Commit: Alexey Shvetsov gentoo org> CommitDate: Tue Oct 25 22:17:27 2022 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=b8a373cc dev-cpp/argparse: add 2.9 Signed-off-by: Alexey Shvetsov gentoo.org> dev-cpp/argparse/Manifest| 1 + dev-cpp/argparse/argparse-2.9.ebuild | 29 + 2 files changed, 30 insertions(+) diff --git a/dev-cpp/argparse/Manifest b/dev-cpp/argparse/Manifest index ba65ae60a21d..c043894820ca 100644 --- a/dev-cpp/argparse/Manifest +++ b/dev-cpp/argparse/Manifest @@ -1,2 +1,3 @@ DIST argparse-2.1.tar.gz 72452 BLAKE2B eece3f1cf6a2e58f5bec99f0223b31ba92147964053d98122099dd806a0ab62c6039ee8741281d1eca28b9d0e3aa02d7d076e8bcc64bbd5dd03c777f8e460531 SHA512 35746e0b526bd4406c954ab315f191abc57b08b48a047f108ddacc7baace406d3b1af23d41caff565afecfeb41dfedd27a08cdba8d11b59dbe7c78b7e9b0 DIST argparse-2.6.tar.gz 93865 BLAKE2B 5ab49a1e9d85e1252b4066fb3278b6c34c0e813f6b49063196cb294544a3adaf45930295834786d41ebbe483b4704be45e90e3a1d53e5085529e78e0b07fad0d SHA512 778e405b7790906794506a2175279465c7d7efa905d0848807fcbddf5ff827e9556a3f2660ee0207a70195a8e9e652ba37ba4df2a038d8646339525cec0f1784 +DIST argparse-2.9.tar.gz 103147 BLAKE2B 2862acd7dc43dea0f7a7a1e6c9541ec8e7b7ecc70ce72ad327b34f72a330799475490e7da4e3a07c9ab28ddec4f88911514690c8b438f36d7c02704fe26b0f08 SHA512 fa471e7d8c448510376e79927496f62775e6ed37e1dffefd607839e6005dfbc61125d0e18bfc1ff20f86cef7efd75339d7bb143dc6574d988f83c7c96896fa5f diff --git a/dev-cpp/argparse/argparse-2.9.ebuild b/dev-cpp/argparse/argparse-2.9.ebuild new file mode 100644 index ..e273fd49b506 --- /dev/null +++ b/dev-cpp/argparse/argparse-2.9.ebuild @@ -0,0 +1,29 @@ +# Copyright 1999-2022 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +inherit cmake + +DESCRIPTION="Argument Parser for Modern C++" +HOMEPAGE="https://github.com/p-ranav/argparse"; +SRC_URI="https://github.com/p-ranav/argparse/archive/v${PV}.tar.gz -> ${P}.tar.gz" + +LICENSE="MIT" +SLOT="0" +KEYWORDS="~amd64 ~arm ~arm64 ~x86" +IUSE="test" +RESTRICT="!test? ( test )" + +src_configure() { + local mycmakeargs=( + -DARGPARSE_BUILD_TESTS=$(usex test) + ) + + cmake_src_configure +} + +src_test() { + cd "${BUILD_DIR}"/test || die + ./tests || die +}
[gentoo-commits] repo/gentoo:master commit in: dev-cpp/argparse/
commit: d6cedadd8ac52efd740ace2bde458a497e47f725 Author: Alexey Shvetsov gentoo org> AuthorDate: Tue Oct 25 22:17:42 2022 + Commit: Alexey Shvetsov gentoo org> CommitDate: Tue Oct 25 22:17:42 2022 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=d6cedadd dev-cpp/argparse: drop 2.1-r1, 2.6 Signed-off-by: Alexey Shvetsov gentoo.org> dev-cpp/argparse/Manifest | 2 -- dev-cpp/argparse/argparse-2.1-r1.ebuild | 14 -- dev-cpp/argparse/argparse-2.6.ebuild| 29 - 3 files changed, 45 deletions(-) diff --git a/dev-cpp/argparse/Manifest b/dev-cpp/argparse/Manifest index c043894820ca..02766a54f2de 100644 --- a/dev-cpp/argparse/Manifest +++ b/dev-cpp/argparse/Manifest @@ -1,3 +1 @@ -DIST argparse-2.1.tar.gz 72452 BLAKE2B eece3f1cf6a2e58f5bec99f0223b31ba92147964053d98122099dd806a0ab62c6039ee8741281d1eca28b9d0e3aa02d7d076e8bcc64bbd5dd03c777f8e460531 SHA512 35746e0b526bd4406c954ab315f191abc57b08b48a047f108ddacc7baace406d3b1af23d41caff565afecfeb41dfedd27a08cdba8d11b59dbe7c78b7e9b0 -DIST argparse-2.6.tar.gz 93865 BLAKE2B 5ab49a1e9d85e1252b4066fb3278b6c34c0e813f6b49063196cb294544a3adaf45930295834786d41ebbe483b4704be45e90e3a1d53e5085529e78e0b07fad0d SHA512 778e405b7790906794506a2175279465c7d7efa905d0848807fcbddf5ff827e9556a3f2660ee0207a70195a8e9e652ba37ba4df2a038d8646339525cec0f1784 DIST argparse-2.9.tar.gz 103147 BLAKE2B 2862acd7dc43dea0f7a7a1e6c9541ec8e7b7ecc70ce72ad327b34f72a330799475490e7da4e3a07c9ab28ddec4f88911514690c8b438f36d7c02704fe26b0f08 SHA512 fa471e7d8c448510376e79927496f62775e6ed37e1dffefd607839e6005dfbc61125d0e18bfc1ff20f86cef7efd75339d7bb143dc6574d988f83c7c96896fa5f diff --git a/dev-cpp/argparse/argparse-2.1-r1.ebuild b/dev-cpp/argparse/argparse-2.1-r1.ebuild deleted file mode 100644 index 67e32ea4d3d2.. --- a/dev-cpp/argparse/argparse-2.1-r1.ebuild +++ /dev/null @@ -1,14 +0,0 @@ -# Copyright 1999-2022 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=8 - -inherit cmake - -DESCRIPTION="Argument Parser for Modern C++" -HOMEPAGE="https://github.com/p-ranav/argparse"; -SRC_URI="https://github.com/p-ranav/argparse/archive/v${PV}.tar.gz -> ${P}.tar.gz" - -LICENSE="MIT" -SLOT="0" -KEYWORDS="~amd64 ~arm ~arm64 ~x86" diff --git a/dev-cpp/argparse/argparse-2.6.ebuild b/dev-cpp/argparse/argparse-2.6.ebuild deleted file mode 100644 index e273fd49b506.. --- a/dev-cpp/argparse/argparse-2.6.ebuild +++ /dev/null @@ -1,29 +0,0 @@ -# Copyright 1999-2022 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=8 - -inherit cmake - -DESCRIPTION="Argument Parser for Modern C++" -HOMEPAGE="https://github.com/p-ranav/argparse"; -SRC_URI="https://github.com/p-ranav/argparse/archive/v${PV}.tar.gz -> ${P}.tar.gz" - -LICENSE="MIT" -SLOT="0" -KEYWORDS="~amd64 ~arm ~arm64 ~x86" -IUSE="test" -RESTRICT="!test? ( test )" - -src_configure() { - local mycmakeargs=( - -DARGPARSE_BUILD_TESTS=$(usex test) - ) - - cmake_src_configure -} - -src_test() { - cd "${BUILD_DIR}"/test || die - ./tests || die -}
[gentoo-commits] repo/gentoo:master commit in: dev-cpp/amqp-cpp/
commit: 2494b9647f5defd40d34722dbe316a00a394f73c Author: Alexey Shvetsov gentoo org> AuthorDate: Tue Oct 25 22:15:02 2022 + Commit: Alexey Shvetsov gentoo org> CommitDate: Tue Oct 25 22:15:02 2022 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=2494b964 dev-cpp/amqp-cpp: add 4.3.18 Signed-off-by: Alexey Shvetsov gentoo.org> dev-cpp/amqp-cpp/Manifest | 1 + dev-cpp/amqp-cpp/amqp-cpp-4.3.18.ebuild | 36 + 2 files changed, 37 insertions(+) diff --git a/dev-cpp/amqp-cpp/Manifest b/dev-cpp/amqp-cpp/Manifest index 33d46fd79d06..728c975bbb29 100644 --- a/dev-cpp/amqp-cpp/Manifest +++ b/dev-cpp/amqp-cpp/Manifest @@ -1,2 +1,3 @@ DIST AMQP-CPP-4.3.16.tar.gz 158954 BLAKE2B 175c5c22a88e20ca5d123fbf808a354a0b3048a0127ba75170b61e8c8822ba8d8b78cb4247cb26cfeebff92c0ca74213d6fb254afbc74e9f92a88751137e8c97 SHA512 bdce6a93f3b88a0ab26dae66e289f98194d0f1a3e2eb03e0c858111275a02ebec042dfe9d757989a1c0cbe1b15652346f86008bf4248e366d1896c4750d9194f DIST AMQP-CPP-4.3.17.tar.gz 160729 BLAKE2B 963b32e4736627da3eece481168565136ad6fd387e71a04de9d08664b6877a38e084e27f482c2c24886bff5c78dcdf266fab88189dc2eef85f3b50d15d020565 SHA512 763e9a3d6565584753a5bcd8f4e8b174327f206e01f001ae8b4b7d1728ccebf195cd2d4463a8b65badc1a91010978360f6f5c25fd3acf70116b5ff7eba2db7f6 +DIST AMQP-CPP-4.3.18.tar.gz 160732 BLAKE2B 3c3d2c21dcd461cf92b67d7e8cfac5a2052a81aade2fd00eca75d4991f9cfc6cfa397924361a7a8a28accb98153c2a50bda259726e81513a1d910390f3d5 SHA512 950d84a769ccbbf146be617297e81d8f036096bcbe5ca520d4b909549bf8d74fc576eec90a1fafb164b86c9eb693c3ae29d884c3a30749f04440646549ffe5ce diff --git a/dev-cpp/amqp-cpp/amqp-cpp-4.3.18.ebuild b/dev-cpp/amqp-cpp/amqp-cpp-4.3.18.ebuild new file mode 100644 index ..33a052a82f5f --- /dev/null +++ b/dev-cpp/amqp-cpp/amqp-cpp-4.3.18.ebuild @@ -0,0 +1,36 @@ +# Copyright 1999-2022 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +inherit cmake + +MY_PN=${PN^^} +MY_P=${MY_PN}-${PV} + +DESCRIPTION="AMQP-CPP is a C++ library for communicating with a RabbitMQ message broker" +HOMEPAGE="https://github.com/CopernicaMarketingSoftware/AMQP-CPP"; +SRC_URI="https://github.com/CopernicaMarketingSoftware/${MY_PN}/archive/v${PV}.tar.gz -> ${MY_P}.tar.gz" +S="${WORKDIR}/${MY_P}" + +LICENSE="Apache-2.0" +SLOT="0" +KEYWORDS="~amd64 ~arm ~arm64 ~x86" + +src_prepare() { + sed \ + -e "s:DESTINATION lib:DESTINATION $(get_libdir):g" \ + -e "s:DESTINATION cmake:DESTINATION $(get_libdir)/cmake/${PN/-/}:g" \ + -i CMakeLists.txt || die + + cmake_src_prepare +} + +src_configure() { + local mycmakeargs=( + -DAMQP-CPP_BUILD_SHARED=ON + -DAMQP-CPP_LINUX_TCP=ON + ) + + cmake_src_configure +}
[gentoo-commits] repo/gentoo:master commit in: dev-cpp/amqp-cpp/
commit: c5297d4c579f20e2ba646edb80dde3574e65bc94 Author: Alexey Shvetsov gentoo org> AuthorDate: Tue Oct 25 22:15:25 2022 + Commit: Alexey Shvetsov gentoo org> CommitDate: Tue Oct 25 22:15:25 2022 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=c5297d4c dev-cpp/amqp-cpp: drop 4.3.16, 4.3.17 Signed-off-by: Alexey Shvetsov gentoo.org> dev-cpp/amqp-cpp/Manifest | 2 -- dev-cpp/amqp-cpp/amqp-cpp-4.3.16.ebuild | 36 - dev-cpp/amqp-cpp/amqp-cpp-4.3.17.ebuild | 36 - 3 files changed, 74 deletions(-) diff --git a/dev-cpp/amqp-cpp/Manifest b/dev-cpp/amqp-cpp/Manifest index 728c975bbb29..fe6a3666924e 100644 --- a/dev-cpp/amqp-cpp/Manifest +++ b/dev-cpp/amqp-cpp/Manifest @@ -1,3 +1 @@ -DIST AMQP-CPP-4.3.16.tar.gz 158954 BLAKE2B 175c5c22a88e20ca5d123fbf808a354a0b3048a0127ba75170b61e8c8822ba8d8b78cb4247cb26cfeebff92c0ca74213d6fb254afbc74e9f92a88751137e8c97 SHA512 bdce6a93f3b88a0ab26dae66e289f98194d0f1a3e2eb03e0c858111275a02ebec042dfe9d757989a1c0cbe1b15652346f86008bf4248e366d1896c4750d9194f -DIST AMQP-CPP-4.3.17.tar.gz 160729 BLAKE2B 963b32e4736627da3eece481168565136ad6fd387e71a04de9d08664b6877a38e084e27f482c2c24886bff5c78dcdf266fab88189dc2eef85f3b50d15d020565 SHA512 763e9a3d6565584753a5bcd8f4e8b174327f206e01f001ae8b4b7d1728ccebf195cd2d4463a8b65badc1a91010978360f6f5c25fd3acf70116b5ff7eba2db7f6 DIST AMQP-CPP-4.3.18.tar.gz 160732 BLAKE2B 3c3d2c21dcd461cf92b67d7e8cfac5a2052a81aade2fd00eca75d4991f9cfc6cfa397924361a7a8a28accb98153c2a50bda259726e81513a1d910390f3d5 SHA512 950d84a769ccbbf146be617297e81d8f036096bcbe5ca520d4b909549bf8d74fc576eec90a1fafb164b86c9eb693c3ae29d884c3a30749f04440646549ffe5ce diff --git a/dev-cpp/amqp-cpp/amqp-cpp-4.3.16.ebuild b/dev-cpp/amqp-cpp/amqp-cpp-4.3.16.ebuild deleted file mode 100644 index 33a052a82f5f.. --- a/dev-cpp/amqp-cpp/amqp-cpp-4.3.16.ebuild +++ /dev/null @@ -1,36 +0,0 @@ -# Copyright 1999-2022 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=8 - -inherit cmake - -MY_PN=${PN^^} -MY_P=${MY_PN}-${PV} - -DESCRIPTION="AMQP-CPP is a C++ library for communicating with a RabbitMQ message broker" -HOMEPAGE="https://github.com/CopernicaMarketingSoftware/AMQP-CPP"; -SRC_URI="https://github.com/CopernicaMarketingSoftware/${MY_PN}/archive/v${PV}.tar.gz -> ${MY_P}.tar.gz" -S="${WORKDIR}/${MY_P}" - -LICENSE="Apache-2.0" -SLOT="0" -KEYWORDS="~amd64 ~arm ~arm64 ~x86" - -src_prepare() { - sed \ - -e "s:DESTINATION lib:DESTINATION $(get_libdir):g" \ - -e "s:DESTINATION cmake:DESTINATION $(get_libdir)/cmake/${PN/-/}:g" \ - -i CMakeLists.txt || die - - cmake_src_prepare -} - -src_configure() { - local mycmakeargs=( - -DAMQP-CPP_BUILD_SHARED=ON - -DAMQP-CPP_LINUX_TCP=ON - ) - - cmake_src_configure -} diff --git a/dev-cpp/amqp-cpp/amqp-cpp-4.3.17.ebuild b/dev-cpp/amqp-cpp/amqp-cpp-4.3.17.ebuild deleted file mode 100644 index 33a052a82f5f.. --- a/dev-cpp/amqp-cpp/amqp-cpp-4.3.17.ebuild +++ /dev/null @@ -1,36 +0,0 @@ -# Copyright 1999-2022 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=8 - -inherit cmake - -MY_PN=${PN^^} -MY_P=${MY_PN}-${PV} - -DESCRIPTION="AMQP-CPP is a C++ library for communicating with a RabbitMQ message broker" -HOMEPAGE="https://github.com/CopernicaMarketingSoftware/AMQP-CPP"; -SRC_URI="https://github.com/CopernicaMarketingSoftware/${MY_PN}/archive/v${PV}.tar.gz -> ${MY_P}.tar.gz" -S="${WORKDIR}/${MY_P}" - -LICENSE="Apache-2.0" -SLOT="0" -KEYWORDS="~amd64 ~arm ~arm64 ~x86" - -src_prepare() { - sed \ - -e "s:DESTINATION lib:DESTINATION $(get_libdir):g" \ - -e "s:DESTINATION cmake:DESTINATION $(get_libdir)/cmake/${PN/-/}:g" \ - -i CMakeLists.txt || die - - cmake_src_prepare -} - -src_configure() { - local mycmakeargs=( - -DAMQP-CPP_BUILD_SHARED=ON - -DAMQP-CPP_LINUX_TCP=ON - ) - - cmake_src_configure -}
[gentoo-commits] repo/gentoo:master commit in: profiles/arch/riscv/, profiles/arch/x86/, profiles/arch/arm64/
commit: 9c734b9dbcad3b07bd18968c8833419240d754a8 Author: Alexey Shvetsov gentoo org> AuthorDate: Thu Sep 15 10:45:33 2022 + Commit: Alexey Shvetsov gentoo org> CommitDate: Thu Sep 15 10:45:33 2022 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=9c734b9d profiles/arch: mask nvml use flag for slurm on arm64 riscv x86 Signed-off-by: Alexey Shvetsov gentoo.org> profiles/arch/arm64/package.use.mask | 4 profiles/arch/riscv/package.use.mask | 4 profiles/arch/x86/package.use.mask | 4 3 files changed, 12 insertions(+) diff --git a/profiles/arch/arm64/package.use.mask b/profiles/arch/arm64/package.use.mask index c4b8e0b8d348..003ac09dd1dd 100644 --- a/profiles/arch/arm64/package.use.mask +++ b/profiles/arch/arm64/package.use.mask @@ -1,6 +1,10 @@ # Copyright 1999-2022 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 +# Alexey Shvetsov (2022-09-15) +# Mask nvml use flag for slurm +sys-cluster/slurm nvml + # Sam James (2022-07-08) # Unmask galera for dev-db/mariadb >=dev-db/mariadb-10.1.0 -galera diff --git a/profiles/arch/riscv/package.use.mask b/profiles/arch/riscv/package.use.mask index ca7f11109878..14469c1b1754 100644 --- a/profiles/arch/riscv/package.use.mask +++ b/profiles/arch/riscv/package.use.mask @@ -1,6 +1,10 @@ # Copyright 2019-2022 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 +# Alexey Shvetsov (2022-09-15) +# Mask nvml use flag for slurm +sys-cluster/slurm nvml + # Jakov Smolić (2022-09-07) # Unkeyworded dependencies (xen-tools, aws stack), masking to reduce # the dependency graph diff --git a/profiles/arch/x86/package.use.mask b/profiles/arch/x86/package.use.mask index cf063345434c..9799b25a0add 100644 --- a/profiles/arch/x86/package.use.mask +++ b/profiles/arch/x86/package.use.mask @@ -1,6 +1,10 @@ # Copyright 1999-2022 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 +# Alexey Shvetsov (2022-09-15) +# Mask nvml use flag for slurm +sys-cluster/slurm nvml + # Alfredo Tupone (2022-08-30) # ada bootstrap currently only available on amd64/x86 sys-devel/gcc -ada
[gentoo-commits] repo/gentoo:master commit in: net-vpn/networkmanager-l2tp/
commit: b8ce8a793839b5a2c13c785da5c6d727625db3e0 Author: Dmitrii Tochanskii tochlab net> AuthorDate: Wed Jun 1 09:49:47 2022 + Commit: Alexey Shvetsov gentoo org> CommitDate: Thu Sep 15 10:30:48 2022 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=b8ce8a79 net-vpn/networkmanager-l2tp: Fix QA 0303 Closes: https://bugs.gentoo.org/846407 Closes: https://github.com/gentoo/gentoo/pull/25721 Signed-off-by: Dmitrii Tochanskii tochlab.net> Signed-off-by: Alexey Shvetsov gentoo.org> net-vpn/networkmanager-l2tp/networkmanager-l2tp-1.20.4-r1.ebuild | 5 + 1 file changed, 5 insertions(+) diff --git a/net-vpn/networkmanager-l2tp/networkmanager-l2tp-1.20.4-r1.ebuild b/net-vpn/networkmanager-l2tp/networkmanager-l2tp-1.20.4-r1.ebuild index 22a3e4e1db75..a401fcd1d01e 100644 --- a/net-vpn/networkmanager-l2tp/networkmanager-l2tp-1.20.4-r1.ebuild +++ b/net-vpn/networkmanager-l2tp/networkmanager-l2tp-1.20.4-r1.ebuild @@ -60,3 +60,8 @@ src_configure() { econf "${myeconfargs[@]}" } + +src_install() { + default + find "${ED}" -name '*.la' -delete || die +}
[gentoo-commits] repo/gentoo:master commit in: net-vpn/networkmanager-l2tp/
commit: 922945c527bf1974135f036f6ada5ef77da854ea Author: Dmitrii Tochanskii tochlab net> AuthorDate: Wed Jun 1 09:43:29 2022 + Commit: Alexey Shvetsov gentoo org> CommitDate: Thu Sep 15 10:30:48 2022 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=922945c5 net-vpn/networkmanager-l2tp: Rename use flag gnome to gtk Bug: https://bugs.gentoo.org/732704 Signed-off-by: Dmitrii Tochanskii tochlab.net> Signed-off-by: Alexey Shvetsov gentoo.org> net-vpn/networkmanager-l2tp/networkmanager-l2tp-1.20.4-r1.ebuild | 8 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/net-vpn/networkmanager-l2tp/networkmanager-l2tp-1.20.4-r1.ebuild b/net-vpn/networkmanager-l2tp/networkmanager-l2tp-1.20.4-r1.ebuild index 833b02cd5708..22a3e4e1db75 100644 --- a/net-vpn/networkmanager-l2tp/networkmanager-l2tp-1.20.4-r1.ebuild +++ b/net-vpn/networkmanager-l2tp/networkmanager-l2tp-1.20.4-r1.ebuild @@ -15,10 +15,10 @@ SRC_URI="https://github.com/nm-l2tp/${MY_PN}/releases/download/${PV}/${MY_P}.tar LICENSE="GPL-2" SLOT="0" KEYWORDS="~amd64 ~x86" -IUSE="gnome static-libs" +IUSE="gtk static-libs" RDEPEND=" - >=net-misc/networkmanager-1.20[ppp] + >=net-misc/networkmanager-1.2[ppp] dev-libs/dbus-glib net-dialup/ppp:=[eap-tls] net-dialup/xl2tpd @@ -27,7 +27,7 @@ RDEPEND=" net-vpn/strongswan net-vpn/libreswan ) - gnome? ( + gtk? ( x11-libs/gtk+:3 app-crypt/libsecret gnome-extra/nm-applet @@ -54,7 +54,7 @@ src_configure() { local myeconfargs=( --localstatedir=/var --with-pppd-plugin-dir=/usr/$(get_libdir)/pppd/${PPPD_VER} - $(use_with gnome) + $(use_with gtk gnome) $(use_enable static-libs static) )
[gentoo-commits] repo/gentoo:master commit in: dev-util/uncrustify/
commit: 90209b21cf291230123bdfcd6ee1559a03f6c975 Author: Alexey Shvetsov gentoo org> AuthorDate: Thu Sep 15 10:23:48 2022 + Commit: Alexey Shvetsov gentoo org> CommitDate: Thu Sep 15 10:23:48 2022 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=90209b21 dev-util/uncrustify: add new version Signed-off-by: Alexey Shvetsov gentoo.org> dev-util/uncrustify/Manifest | 3 +-- dev-util/uncrustify/uncrustify-0.74.0.ebuild | 31 -- ...tify-0.72.0.ebuild => uncrustify-0.75.1.ebuild} | 2 +- 3 files changed, 2 insertions(+), 34 deletions(-) diff --git a/dev-util/uncrustify/Manifest b/dev-util/uncrustify/Manifest index c4a0b51af119..98edbbf2fe54 100644 --- a/dev-util/uncrustify/Manifest +++ b/dev-util/uncrustify/Manifest @@ -1,3 +1,2 @@ DIST uncrustify-0.71.0.tar.gz 1704631 BLAKE2B 3dc9122647e2c173a776c4ad24c93d7b88fdd00c6c4f3070e68fd7a272218335063d8563446a3c8e72ff68e41d00a265aca76682a8cea201a33230377d7e425a SHA512 220ecbebb1c1d6abadb96c339e4ca9b264a04fa08bc83e9b0fabba5fae425efd1911d175d18b635521614ec9c33aa389fadaeec62ebf28a5d71e595900a92181 -DIST uncrustify-0.72.0.tar.gz 1530850 BLAKE2B 59b3ff4b47fee1f2a303e237d46b5fb656041e4d397aa97862cc7aebb6a5e705d036889a7b492bbe4393537ff52cf78af46bbe513e71aef19fca1388e3ffa79b SHA512 bfcbdf0d8198e1dd91f1c8283441a56669610a84d55a17cdd504571da09b26fef026fd3f753acd9950e498f574e6771a206c72b76ffdea97747b7a4fdb481862 -DIST uncrustify-0.74.0.tar.gz 1565507 BLAKE2B b3e8289b68d859e9e52c16c4fc2c2cb2708314af20b2e8396ae5311374aace98a1d3ebba3173a0b0260c24f5a847d3a91aec03c9f65a69b1c5584c86950663d6 SHA512 97348bf151464e12e292a38dfdbb98d62c15bdd7dd990da7c8854969ceb53d6f70a0873a6e09b9978291010615dda29c3486a4e8a77dc1bfb881c34df01143c5 +DIST uncrustify-0.75.1.tar.gz 1603502 BLAKE2B 096a933757b2894f61cf0630f1329f7c118e28469f8bf14b4bc696ffeed031792829a0bb6432c528610e0d58ea3a0a3c007b2d9821f855d646b330fad6e25f2a SHA512 105e723a3421153919f7280288559cdf6a0ff80bf37575348195f8f83f3f3863b0084911ec8b07b0a88147bd8321698e1108c91fa3892fdaed59048d4057e3de diff --git a/dev-util/uncrustify/uncrustify-0.74.0.ebuild b/dev-util/uncrustify/uncrustify-0.74.0.ebuild deleted file mode 100644 index e4c34c2bcb23.. --- a/dev-util/uncrustify/uncrustify-0.74.0.ebuild +++ /dev/null @@ -1,31 +0,0 @@ -# Copyright 1999-2021 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -if [[ ${PV} == ** ]]; then - EGIT_REPO_URI="https://github.com/${PN}/${PN}.git"; - scm_eclass=git-r3 -else - KEYWORDS="~amd64 ~x86 ~amd64-linux ~ppc-macos ~x64-macos ~x64-solaris ~x86-solaris" - SRC_URI="https://github.com/${PN}/${PN}/archive/${P}.tar.gz"; - S=${WORKDIR}/${PN}-${P} -fi - -PYTHON_COMPAT=( python3_{8..10} ) - -inherit cmake python-any-r1 ${scm_eclass} - -DESCRIPTION="C/C++/C#/D/Java/Pawn code indenter and beautifier" -HOMEPAGE="http://uncrustify.sourceforge.net/"; - -LICENSE="GPL-2" -SLOT="0" -IUSE="test" -RESTRICT="!test? ( test )" - -BDEPEND="test? ( ${PYTHON_DEPS} )" - -pkg_setup() { - use test && python-any-r1_pkg_setup -} diff --git a/dev-util/uncrustify/uncrustify-0.72.0.ebuild b/dev-util/uncrustify/uncrustify-0.75.1.ebuild similarity index 94% rename from dev-util/uncrustify/uncrustify-0.72.0.ebuild rename to dev-util/uncrustify/uncrustify-0.75.1.ebuild index e4c34c2bcb23..7d5daa8187dd 100644 --- a/dev-util/uncrustify/uncrustify-0.72.0.ebuild +++ b/dev-util/uncrustify/uncrustify-0.75.1.ebuild @@ -1,4 +1,4 @@ -# Copyright 1999-2021 Gentoo Authors +# Copyright 1999-2022 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 EAPI=7
[gentoo-commits] repo/gentoo:master commit in: dev-cpp/amqp-cpp/
commit: c0cbeb2177e018f5cb26e45fd4cb1a624e0f7900 Author: Alexey Shvetsov gentoo org> AuthorDate: Thu Sep 15 10:16:31 2022 + Commit: Alexey Shvetsov gentoo org> CommitDate: Thu Sep 15 10:16:31 2022 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=c0cbeb21 dev-cpp/amqp-cpp: add 4.3.17, drop 4.3.10-r1 Signed-off-by: Alexey Shvetsov gentoo.org> dev-cpp/amqp-cpp/Manifest | 2 +- dev-cpp/amqp-cpp/{amqp-cpp-4.3.10-r1.ebuild => amqp-cpp-4.3.17.ebuild} | 0 2 files changed, 1 insertion(+), 1 deletion(-) diff --git a/dev-cpp/amqp-cpp/Manifest b/dev-cpp/amqp-cpp/Manifest index 3d50a2b70732..33d46fd79d06 100644 --- a/dev-cpp/amqp-cpp/Manifest +++ b/dev-cpp/amqp-cpp/Manifest @@ -1,2 +1,2 @@ -DIST AMQP-CPP-4.3.10.tar.gz 156600 BLAKE2B 0453259e8d84b223fc8d36d4747b267a84d7db9daef55d13ff31d4c8cf1e5dd8efb87d9f83f7ff7554aa70c5000d6da45187ce03db09ff4c542bd5409d81ada8 SHA512 ef9a20cd066bbefc243d8d58dbded728e0c88f5c47134f835c50dfa01178b53200970333f0d56330c206f74aa7d7691556c3e4693d5276adb7e3bf4e66bcd057 DIST AMQP-CPP-4.3.16.tar.gz 158954 BLAKE2B 175c5c22a88e20ca5d123fbf808a354a0b3048a0127ba75170b61e8c8822ba8d8b78cb4247cb26cfeebff92c0ca74213d6fb254afbc74e9f92a88751137e8c97 SHA512 bdce6a93f3b88a0ab26dae66e289f98194d0f1a3e2eb03e0c858111275a02ebec042dfe9d757989a1c0cbe1b15652346f86008bf4248e366d1896c4750d9194f +DIST AMQP-CPP-4.3.17.tar.gz 160729 BLAKE2B 963b32e4736627da3eece481168565136ad6fd387e71a04de9d08664b6877a38e084e27f482c2c24886bff5c78dcdf266fab88189dc2eef85f3b50d15d020565 SHA512 763e9a3d6565584753a5bcd8f4e8b174327f206e01f001ae8b4b7d1728ccebf195cd2d4463a8b65badc1a91010978360f6f5c25fd3acf70116b5ff7eba2db7f6 diff --git a/dev-cpp/amqp-cpp/amqp-cpp-4.3.10-r1.ebuild b/dev-cpp/amqp-cpp/amqp-cpp-4.3.17.ebuild similarity index 100% rename from dev-cpp/amqp-cpp/amqp-cpp-4.3.10-r1.ebuild rename to dev-cpp/amqp-cpp/amqp-cpp-4.3.17.ebuild
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gromacs/
commit: 5e77ea315f91898e406f29a453e5e6fee246a375 Author: Alexey Shvetsov gentoo org> AuthorDate: Thu Sep 15 10:05:08 2022 + Commit: Alexey Shvetsov gentoo org> CommitDate: Thu Sep 15 10:08:38 2022 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=5e77ea31 sci-chemistry/gromacs: add 2022.3, drop 2022.1 Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/gromacs/Manifest | 6 +++--- .../gromacs/{gromacs-2022.1.ebuild => gromacs-2022.3.ebuild}| 2 +- 2 files changed, 4 insertions(+), 4 deletions(-) diff --git a/sci-chemistry/gromacs/Manifest b/sci-chemistry/gromacs/Manifest index 9b35e520e111..6b31f7f7e8cb 100644 --- a/sci-chemistry/gromacs/Manifest +++ b/sci-chemistry/gromacs/Manifest @@ -4,21 +4,21 @@ DIST gromacs-2020.4.tar.gz 29149899 BLAKE2B a07c8efd96137d58c1edf4ac9b5aafeb16d9 DIST gromacs-2020.7.tar.gz 29175554 BLAKE2B 98f1aa415946f8eb113febc81105f0c1b0919b96fc3c55a0ab83bf3950ff509b81eade92e645adb0bc2b407df239e20cf3f19828b6e08616437c8693c1fddcc8 SHA512 1d375c44cec38445e56cea252623b5b6c565680268999d4b6c14d6dc38759a27227655b2d29efaab9f9115d3677b446cb555e11cddafa0dc10c4827caaa2477b DIST gromacs-2021.3.tar.gz 37987972 BLAKE2B d71995c7d5a34978246e33dc637ac3d273e547afcf72d1a107026650f03286ecdf27e4b9a70113b3c3a01af59ad49ac5c813aa6e5d2e8eb29fd05582a7a28d34 SHA512 da420917d06de2e192dfbb4e1b9f46989ed05b5c7e641c657104ed8f2bd8b22509bffd1ecfd7c965c80544eafa6af12d6d0aba7e1e7d9d14a4a88fb3fbf394a5 DIST gromacs-2021.5.tar.gz 38023772 BLAKE2B 45e1f080b86626423e471f06b48b615db1913048f9f6998da8ce45408339b32f829d33dd2af57297a7d307fcffd556c333a58c309ee0f2adb021ca3755619b05 SHA512 56c1b312fc8e52ec6f86e445d2fa2d07107c461b35d4dc8cdf95580f05fd8e6c5fd671d0e72b2b9e74e3232bc8c41db496fe4bcaf2b9a3ae3c2cfa93489a31c5 -DIST gromacs-2022.1.tar.gz 40375423 BLAKE2B fe28ec4c080500d0248bd3d37ec742e8cf51ba3520b5a7c3f640413b232fcf96354940c743e2a54a9fde04c98ecb2fd317863d8c06b008f516fefc0e9e1197dd SHA512 80c98badb7ebad171925486d1676b64e787cf8cbfb8f1b1cf1ccab8cbf8d8340f7fdd084dfb7388afc7a3aef23b95d603265305faf82125324307d86460c6f17 DIST gromacs-2022.2.tar.gz 40350604 BLAKE2B 789c8abc13b5c64af6b9d66efcf70449330b7e6a4bc127ba299e36eea925e9485809c11480ffd857805d9b453df363ce9bb05bc54b439801334767651defc0ef SHA512 9f33518d2035afb37fc40377e575d497ff32bef2adb702669b35b1b51b1694b1113c5634fa6febd41955b6dfbfd055e7d523e1919bda1bf169a6d0c25700cef7 +DIST gromacs-2022.3.tar.gz 40359623 BLAKE2B 23beacf7208df89aea6c3effe483361451a9ff20428fe79ec163a5eee4dc0db0bb00a2bee84bc9377ad272f216fd372eab1b77e8542ce231ac785b41b582fa15 SHA512 1a6a1674ed17dfd93dcd51537cd13c9df5bb9bd91c3a26601032f83b788a93689bac8070eb8e495a786d41cc9d474885538cbaffa4229da70dfa640ee42b7c60 DIST manual-2018.8.pdf 10025023 BLAKE2B afb0a6e6a72d78df743fcb57e7c1716848589e571dd35167b957a9b407ca27978ccfb6cb9e0df9c9439b888f352501a00ba32281ed1e0b4193bd606f1d77152e SHA512 b1972f7ce965bfc9377542993c5943ea4868a8ed23a969d4203264746d6bea3a7a65c6379196ece37fd6d68ec7ec80f827bde87d1049284af7082759a124f1d5 DIST manual-2019.6.pdf 12702376 BLAKE2B c350127bc06a9eb3dee73da39037c84daeb89500e23cb131bd19a150bf60602d4dde7611e0c6f0f344af4093e96a899303dac71b4df56fd0c44c3a48a56606b7 SHA512 dfdff67c2c1c9ce1f1c236b7686c5331b0fe86951da6c98eddd6a3e748815e0be0a9653ae4318469fcdd913c4e7c355d64a997cc80b9d9fbe6282ef6d98e61eb DIST manual-2020.4.pdf 11851608 BLAKE2B 7b7bdf08e8946fcc448543b08391b94a67fee60a8c810597c1f09f70443f9d7db817c99622dd0c21c6317f5fdcd6c4a88589ecac57055cb0cd8597d6021026e7 SHA512 928555663c77de36393e625c29d388d4e1c8c1298e7a993d871839e0d4d8d18d190221ad8f1d975bd072bdd6a061e9ea5b9295f2ecf45f24b6523ea5ea290fed DIST manual-2020.7.pdf 11850780 BLAKE2B 38594e87993badfbbcf47d6010a7f67d3c3426dab85e1462916b4d62be27b5764953f912cf2b71ee24877e0bfa27b3f74431da2da81b4977d58cb66b2cc795a3 SHA512 4f184f2c90e0bac01a48069cc546cd5b04fa5f543f90dd2d68c6d17be278152fd09456b6a6c5c8236f8fb85a174d6ec7a1c7b44d437b4e6fea5d0ada73cec0f6 DIST manual-2021.3.pdf 12255076 BLAKE2B 6ca516b6832507c9d4100679d1f9bc9e3ab17d226849b050764b0d0626247dc57ce49985f9a7fc0061f3df278923a83faa367ca8ab91c37e5624dc584a51a822 SHA512 5d53798f30ea00fcb4e1b35f7eaa4bebfc05dafa4f2d0c197dcf2b57a624ad3a98b74fd90722e40d0ac13a6fff4ca231f9d6340f52ba94659c827c53c2f1cb16 DIST manual-2021.5.pdf 12253641 BLAKE2B 8850715a2bb21345e1c9735aca1a5dd2ad916e5a18881e7c9f3dda6f055ca12d9d379b74218138999ce50769efd8b9dd6447afbf70bbbefa2564dfb9fb276b91 SHA512 7635108c935e4953d722df6a16ee43edf97eef7e49f047218728f68f61f8f185192ff1d8b13a573b643b040955af211355a7b560c8a894c858d7f71249d41296 -DIST manual-2022.1.pdf 13069337 BLAKE2B fed4d5b5ddc2b91dd2de2873c3efc01f6ce65b033840a79fda471b4481920fa6c5f5d9f23660d97ba4c84e0c7b75dc4c8723ed51413ad55c980818c394e9fde1 SHA512 73455190aec62aaffe760dddac4de26ea148d825f4c2d0e04d38c88b87fe15b7138b5a872bf9757452ac39e68942943c73e19025730ece8052d4a6a1873ca40e DIST manual-2022.2.pdf 1307
[gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gromacs/
commit: fbd0d4075b4cd2e6bced240cbcb944986f75b9e3 Author: Alexey Shvetsov gentoo org> AuthorDate: Thu Sep 15 10:06:29 2022 + Commit: Alexey Shvetsov gentoo org> CommitDate: Thu Sep 15 10:08:44 2022 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=fbd0d407 sci-chemistry/gromacs: add 2021.6 Signed-off-by: Alexey Shvetsov gentoo.org> sci-chemistry/gromacs/Manifest | 3 + sci-chemistry/gromacs/gromacs-2021.6.ebuild | 355 2 files changed, 358 insertions(+) diff --git a/sci-chemistry/gromacs/Manifest b/sci-chemistry/gromacs/Manifest index 6b31f7f7e8cb..f999c8f5def4 100644 --- a/sci-chemistry/gromacs/Manifest +++ b/sci-chemistry/gromacs/Manifest @@ -4,6 +4,7 @@ DIST gromacs-2020.4.tar.gz 29149899 BLAKE2B a07c8efd96137d58c1edf4ac9b5aafeb16d9 DIST gromacs-2020.7.tar.gz 29175554 BLAKE2B 98f1aa415946f8eb113febc81105f0c1b0919b96fc3c55a0ab83bf3950ff509b81eade92e645adb0bc2b407df239e20cf3f19828b6e08616437c8693c1fddcc8 SHA512 1d375c44cec38445e56cea252623b5b6c565680268999d4b6c14d6dc38759a27227655b2d29efaab9f9115d3677b446cb555e11cddafa0dc10c4827caaa2477b DIST gromacs-2021.3.tar.gz 37987972 BLAKE2B d71995c7d5a34978246e33dc637ac3d273e547afcf72d1a107026650f03286ecdf27e4b9a70113b3c3a01af59ad49ac5c813aa6e5d2e8eb29fd05582a7a28d34 SHA512 da420917d06de2e192dfbb4e1b9f46989ed05b5c7e641c657104ed8f2bd8b22509bffd1ecfd7c965c80544eafa6af12d6d0aba7e1e7d9d14a4a88fb3fbf394a5 DIST gromacs-2021.5.tar.gz 38023772 BLAKE2B 45e1f080b86626423e471f06b48b615db1913048f9f6998da8ce45408339b32f829d33dd2af57297a7d307fcffd556c333a58c309ee0f2adb021ca3755619b05 SHA512 56c1b312fc8e52ec6f86e445d2fa2d07107c461b35d4dc8cdf95580f05fd8e6c5fd671d0e72b2b9e74e3232bc8c41db496fe4bcaf2b9a3ae3c2cfa93489a31c5 +DIST gromacs-2021.6.tar.gz 38012702 BLAKE2B 023ae37dc53643758afa050fd179cd66f3c6d6266f6afceee5eb35c890a3ae284956f2bc2409156d6e1fa03a7f23f7b04c27e1820547fd5f147b344d94da7d40 SHA512 65d7874e5cd838ce4f29d033c66304738ccc30f1987f9f8541725058b2fc4551302a399f6ce773e81ac9485963187c48feaf92c71789f4c345c82bd335f806a7 DIST gromacs-2022.2.tar.gz 40350604 BLAKE2B 789c8abc13b5c64af6b9d66efcf70449330b7e6a4bc127ba299e36eea925e9485809c11480ffd857805d9b453df363ce9bb05bc54b439801334767651defc0ef SHA512 9f33518d2035afb37fc40377e575d497ff32bef2adb702669b35b1b51b1694b1113c5634fa6febd41955b6dfbfd055e7d523e1919bda1bf169a6d0c25700cef7 DIST gromacs-2022.3.tar.gz 40359623 BLAKE2B 23beacf7208df89aea6c3effe483361451a9ff20428fe79ec163a5eee4dc0db0bb00a2bee84bc9377ad272f216fd372eab1b77e8542ce231ac785b41b582fa15 SHA512 1a6a1674ed17dfd93dcd51537cd13c9df5bb9bd91c3a26601032f83b788a93689bac8070eb8e495a786d41cc9d474885538cbaffa4229da70dfa640ee42b7c60 DIST manual-2018.8.pdf 10025023 BLAKE2B afb0a6e6a72d78df743fcb57e7c1716848589e571dd35167b957a9b407ca27978ccfb6cb9e0df9c9439b888f352501a00ba32281ed1e0b4193bd606f1d77152e SHA512 b1972f7ce965bfc9377542993c5943ea4868a8ed23a969d4203264746d6bea3a7a65c6379196ece37fd6d68ec7ec80f827bde87d1049284af7082759a124f1d5 @@ -12,6 +13,7 @@ DIST manual-2020.4.pdf 11851608 BLAKE2B 7b7bdf08e8946fcc448543b08391b94a67fee60a DIST manual-2020.7.pdf 11850780 BLAKE2B 38594e87993badfbbcf47d6010a7f67d3c3426dab85e1462916b4d62be27b5764953f912cf2b71ee24877e0bfa27b3f74431da2da81b4977d58cb66b2cc795a3 SHA512 4f184f2c90e0bac01a48069cc546cd5b04fa5f543f90dd2d68c6d17be278152fd09456b6a6c5c8236f8fb85a174d6ec7a1c7b44d437b4e6fea5d0ada73cec0f6 DIST manual-2021.3.pdf 12255076 BLAKE2B 6ca516b6832507c9d4100679d1f9bc9e3ab17d226849b050764b0d0626247dc57ce49985f9a7fc0061f3df278923a83faa367ca8ab91c37e5624dc584a51a822 SHA512 5d53798f30ea00fcb4e1b35f7eaa4bebfc05dafa4f2d0c197dcf2b57a624ad3a98b74fd90722e40d0ac13a6fff4ca231f9d6340f52ba94659c827c53c2f1cb16 DIST manual-2021.5.pdf 12253641 BLAKE2B 8850715a2bb21345e1c9735aca1a5dd2ad916e5a18881e7c9f3dda6f055ca12d9d379b74218138999ce50769efd8b9dd6447afbf70bbbefa2564dfb9fb276b91 SHA512 7635108c935e4953d722df6a16ee43edf97eef7e49f047218728f68f61f8f185192ff1d8b13a573b643b040955af211355a7b560c8a894c858d7f71249d41296 +DIST manual-2021.6.pdf 12256595 BLAKE2B 5d808e38571b38c1f6e0d115f6e604238206cc001f59d05ed855e80c324c0e6fd7767adb723b3d0edd1267ae5973a3b83b76bd04d2dc99769e6440600d8e2146 SHA512 64fe56422d7417f6f61b10346c99e24c3f423f0cedc3794e0809250282bc87ef692b47ae6c3f95ad7994aa3860ed82035cbacc76eb78a2f54a29052a05260af2 DIST manual-2022.2.pdf 13075063 BLAKE2B 1c9e525d45f1b9955f1aa2c4afa8c958b8ea62c51c28fafdebe302e3e5f6e04c97d1852e4ab2ba18149778d62959d9e7e42be9e4cd98f8187029cc590b1dfd9a SHA512 9b4d9b13547e0210b633394e0c9cba183a827409b08d3b2995a4b64df7b7e7aef0441af240bf4cfcb2e24594ade27c25fee454b9fcf4bb5df0ded464c4f6368d DIST manual-2022.3.pdf 13080874 BLAKE2B 3e70da8f70281c78084f5f9af86cdcda187c7b3085f08d95487992a65e31b7dae0b3e66d914dc0bccaf1bfe4c672d2018f38d0bde679759545aca55d1df1f554 SHA512 f634eac722d4a6f77820ef46024d9209de97fb6afb52333f200c2717049d8d09e31f0ef7bac8f154d79ae43fa31541ed6c3d839dd088433222ebdace298b5
[gentoo-commits] repo/gentoo:master commit in: profiles/
commit: a34a195a9b018eecac186686a2f88d21daff2f04 Author: Alexey Shvetsov gentoo org> AuthorDate: Thu Sep 15 08:07:56 2022 + Commit: Alexey Shvetsov gentoo org> CommitDate: Thu Sep 15 08:07:56 2022 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=a34a195a profiles: Remove slurm p.mask since valnurable version no longer in tree Bug: https://bugs.gentoo.org/631552 Bug: https://bugs.gentoo.org/790296 Bug: https://bugs.gentoo.org/842789 Signed-off-by: Alexey Shvetsov gentoo.org> profiles/package.mask | 6 -- 1 file changed, 6 deletions(-) diff --git a/profiles/package.mask b/profiles/package.mask index 88e14b650d4b..0bdb302f3993 100644 --- a/profiles/package.mask +++ b/profiles/package.mask @@ -315,12 +315,6 @@ x11-terms/mrxvt # days, bug #618000 media-libs/libaacplus -# John Helmert III (2022-08-14) -# Many vulnerabilities (including code execution and root privilege -# escalation), effectively unmaintained. Removal in 30 days, bugs -# #631552, #790296, #842789 -sys-cluster/slurm - # John Helmert III (2022-08-14) # Vulnerable and unmaintained for years, many open bugs, no revdeps, # EAPI 6. Removal in 30 days, bug 733354
[gentoo-commits] repo/gentoo:master commit in: sys-cluster/slurm/
commit: 0aea4dac7e2b6099fbe6d299ef0299e04c6832a6 Author: Alexey Shvetsov gentoo org> AuthorDate: Thu Sep 15 08:05:51 2022 + Commit: Alexey Shvetsov gentoo org> CommitDate: Thu Sep 15 08:05:51 2022 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=0aea4dac sys-cluster/slurm: Should fix possible privilege escalation Bug: https://bugs.gentoo.org/631552 Signed-off-by: Alexey Shvetsov gentoo.org> sys-cluster/slurm/slurm-22.05.3.ebuild | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/sys-cluster/slurm/slurm-22.05.3.ebuild b/sys-cluster/slurm/slurm-22.05.3.ebuild index 607d3dc407bb..0b5e602258f3 100644 --- a/sys-cluster/slurm/slurm-22.05.3.ebuild +++ b/sys-cluster/slurm/slurm-22.05.3.ebuild @@ -243,7 +243,7 @@ pkg_preinst() { create_folders_and_fix_permissions() { einfo "Fixing permissions in ${@}" mkdir -p ${@} || die - chown -R ${PN}:${PN} ${@} || die + chown ${PN}:${PN} ${@} || die } pkg_postinst() {
[gentoo-commits] repo/gentoo:master commit in: sys-cluster/slurm/, sys-cluster/slurm/files/
commit: b1947dd126dfbf1a19f631b770d3e36fffdf334e Author: Alexey Shvetsov gentoo org> AuthorDate: Thu Sep 15 08:00:39 2022 + Commit: Alexey Shvetsov gentoo org> CommitDate: Thu Sep 15 08:00:39 2022 + URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=b1947dd1 sys-cluster/slurm: Update to new version Closes: https://bugs.gentoo.org/744148 Bug: https://bugs.gentoo.org/790296 Bug: https://bugs.gentoo.org/842789 Signed-off-by: Alexey Shvetsov gentoo.org> sys-cluster/slurm/Manifest | 2 +- ...-lua.patch => slurm-22.05.3_autoconf-lua.patch} | 19 +- sys-cluster/slurm/metadata.xml | 6 +- sys-cluster/slurm/slurm-20.11.0.1-r105.ebuild | 275 - ...-20.11.0.1-r104.ebuild => slurm-22.05.3.ebuild} | 34 ++- 5 files changed, 38 insertions(+), 298 deletions(-) diff --git a/sys-cluster/slurm/Manifest b/sys-cluster/slurm/Manifest index ba0ae40fe894..94e324733874 100644 --- a/sys-cluster/slurm/Manifest +++ b/sys-cluster/slurm/Manifest @@ -1 +1 @@ -DIST slurm-20-11-0-1.tar.gz 8762691 BLAKE2B 1e24a04b3faf97f4df98bd982d67d47f79670b863f466326e45e00fac0b99124122e94e30054a97471e4337234cbd213806791bdd5b3bddfeb05bef55f42931e SHA512 9a57f2610f7294ba6cd265746b874e32a7930100f30c0adf41d95b261787c441bdcacaa641f0b9785150b94fc7d6b5b7608ec618f668bffcae6f774752f17678 +DIST slurm-22.05.3.tar.bz2 7098045 BLAKE2B 597d297bf5f98a6aa98f1cc3047f9d0e88051f80e0d55e931d53a9b3e6bfa5911fe8aa486f56fef2d8f8d3a02fe41cf89625ae65e3737c87ceb9d123f03beb0d SHA512 a500fb657f7d4d3d063307e176e26e537962434ff73ad8d13e16c34c70e94916fdab4e08e23d40aedec7edd86be996d2366e82fcb952c83f5498e59ca47c3f21 diff --git a/sys-cluster/slurm/files/slurm-20.11.0.1_autoconf-lua.patch b/sys-cluster/slurm/files/slurm-22.05.3_autoconf-lua.patch similarity index 75% rename from sys-cluster/slurm/files/slurm-20.11.0.1_autoconf-lua.patch rename to sys-cluster/slurm/files/slurm-22.05.3_autoconf-lua.patch index f17039e0b59d..f5723f7b85bc 100644 --- a/sys-cluster/slurm/files/slurm-20.11.0.1_autoconf-lua.patch +++ b/sys-cluster/slurm/files/slurm-22.05.3_autoconf-lua.patch @@ -1,23 +1,22 @@ -Prevent automagical detection of Lua, abort if Lua support has been -requested but Lua cannot be found with pkg-config, and use the Lua -pkg-config module set up by the eclass-provided wrapper (or unslotted Lua) -instead of enumerating installed versions. - +diff --git a/auxdir/x_ac_lua.m4 b/auxdir/x_ac_lua.m4 +index 6941281bd5..206498191f 100644 --- a/auxdir/x_ac_lua.m4 +++ b/auxdir/x_ac_lua.m4 -@@ -12,18 +12,21 @@ +@@ -12,20 +12,21 @@ AC_DEFUN([X_AC_LUA], [ - x_ac_lua_pkg_name="lua" -- #check for 5.3 then 5.2 then 5.1 -- PKG_CHECK_EXISTS([lua5.3], [x_ac_lua_pkg_name=lua5.3], +- #check for 5.4, 5.3, 5.2 and then 5.1 +- PKG_CHECK_EXISTS([lua5.4], [x_ac_lua_pkg_name=lua5.4], +- [PKG_CHECK_EXISTS([lua-5.4], [x_ac_lua_pkg_name=lua-5.4], +- [PKG_CHECK_EXISTS([lua5.3], [x_ac_lua_pkg_name=lua5.3], - [PKG_CHECK_EXISTS([lua-5.3], [x_ac_lua_pkg_name=lua-5.3], - [PKG_CHECK_EXISTS([lua5.2], [x_ac_lua_pkg_name=lua5.2], - [PKG_CHECK_EXISTS([lua-5.2], [x_ac_lua_pkg_name=lua-5.2], - [PKG_CHECK_EXISTS([lua5.1], [x_ac_lua_pkg_name=lua5.1], - [PKG_CHECK_EXISTS([lua-5.1], [x_ac_lua_pkg_name=lua-5.1], -- [x_ac_lua_pkg_name="lua >= 5.1"])])])])])]) +- [x_ac_lua_pkg_name="lua >= 5.1"])])])])])])])]) - PKG_CHECK_MODULES([lua], ${x_ac_lua_pkg_name}, -[x_ac_have_lua="yes"], -[x_ac_have_lua="no"]) @@ -39,7 +38,7 @@ instead of enumerating installed versions. if test "x$x_ac_have_lua" = "xyes"; then saved_CFLAGS="$CFLAGS" -@@ -52,8 +55,6 @@ +@@ -60,8 +61,6 @@ AC_DEFUN([X_AC_LUA], fi CFLAGS="$saved_CFLAGS" LIBS="$saved_LIBS" diff --git a/sys-cluster/slurm/metadata.xml b/sys-cluster/slurm/metadata.xml index fbaaba0061db..5f5481fc23fa 100644 --- a/sys-cluster/slurm/metadata.xml +++ b/sys-cluster/slurm/metadata.xml @@ -10,16 +10,20 @@ Gentoo Cluster Project + Build html documentation Build support for collecting some ipmi stats Add support for json-persing via json-c Enable authentication via munge Allow multiple slurmd to run - Add support for netloc (amd64 only) Add NUMA awareness + Enable the NVML device discovery Add Infiniband support via ofed + Enable RRD export plugin Install SQL server for slurmdbd + Enable interface to Slurm via REST API Enable perl scripts that emulates pbs (qstat, qsub e