Re: [gentoo-user] Clusters on Gentoo ?

2014-08-07 Thread J. Roeleveld
On Wednesday, August 06, 2014 04:50:22 PM James wrote:
snipped

 Hopefully, we can all share ideas and brainstorm about how Gentoo users
 can lead the pack of linux distros into this brave_new world. [Overlays?]

A good place to start would also be:
http://www.yolinux.com/TUTORIALS/LinuxClustersAndFileSystems.html

--
Joost




Re: [gentoo-user] Clusters on Gentoo ?

2014-08-07 Thread Alec Ten Harmsel
I'm a Hadoop and related software sysadmin at the University of 
Michigan. I'm a student still, so it's only a part-time position. I 
have some documentation at http://caen.github.io/hadoop - if something 
is not clear, I will gladly take feedback and make appropriate changes.

 In a recent thread (schedulers) it was noted that several folks had interest
 in clusters (privately operated clouds) as more than a passing interest.

 I'll try to chime in on any questions about scheduling/clusters in the 
future as we have a pretty large installation (~20,000 cores) running a 
traditional HPC stack, and a small Hadoop cluster.

 [2] http://hadoop.apache.org/docs/r1.2.1/cluster_setup.html

Hadoop is currently stable on 2.x (specifically 2.4), so relevant 
documentation is at http://hadoop.apache.org/docs/stable.

Alec



Re: [gentoo-user] Gnome, pam_mount, keyrings ...

2014-08-07 Thread Stefan G. Weichinger
Am 06.08.2014 um 15:18 schrieb Neil Bothwick:
 On Wed, 6 Aug 2014 13:30:44 +0100, Mick wrote:
 
 In any case 'cryptsetup -y luksAddKey /dev/sdaX' allows you to add a 
 passphrase in another slot - can't recall how many passphrase slots are
 there without looking into it.
 
 8. You can see which are in use with cryptsetup luksDump.

I was successful at adding and using a second or third passphrase.
But logging into gdm didn't use the new passphrase and I don't exactly
know where to put that information. Gnome keyring?

Stefan




[gentoo-user] Re: Clusters on Gentoo ?

2014-08-07 Thread James
Alec Ten Harmsel alec at alectenharmsel.com writes:


 I'm a Hadoop and related software sysadmin at the University of 
 Michigan. I'm a student still, so it's only a part-time position. I 
 have some documentation at http://caen.github.io/hadoop - if something 
 is not clear, I will gladly take feedback and make appropriate changes.

  I'll try to chime in on any questions about scheduling/clusters in the 
 future as we have a pretty large installation (~20,000 cores) running a 
 traditional HPC stack, and a small Hadoop cluster.

  [2] http://hadoop.apache.org/docs/r1.2.1/cluster_setup.html
 
 Hadoop is currently stable on 2.x (specifically 2.4), so relevant 
 documentation is at http://hadoop.apache.org/docs/stable.


Which operating systems does you Hadoop systems run on top of?


Whilst research, I ran across a FAT PAYCHECK at a startup for Hadoop
expertise (California)  :

Extremely competitive pay: 150-175K base salary, large bonus plan, and a
generous equity stake


http://www.cybercoders.com/principal-software-engineer-backend-technology-agnostic-job-157829?jobId=EON-1157039ad=recruiticsindeedrx_job=19411798rx_source=Indeedrx_campaign=Indeed15rx_medium=CPC


enjoy!
James




Re: [gentoo-user] Re: Clusters on Gentoo ?

2014-08-07 Thread Alec Ten Harmsel
 Which operating systems does you Hadoop systems run on top of?

We use RedHat, although we make a fair amount of custom RPMs. It's just
too much having to deal with Gentoo while maintaining high performance
filesystems and schedulers, which are apparently a real pain.

 Whilst research, I ran across a FAT PAYCHECK at a startup for Hadoop
expertise (California) : Extremely competitive pay: 150-175K base
salary, large bonus plan, and a generous equity stake

Lolz, a few of the full time staff regularly get headhunted for similar
positions. I'm still a student and would like to finish the degree,
though, so no high paying jobs for me yet.

Alec



[gentoo-user] unclear (to me) errors from portage

2014-08-07 Thread gottlieb
I was away for two weeks and now one of my systems cannot be updated due
to  conflicts.  The entire (long) emerge output is at the end of
this msg.


--  The first conflict is ---


!!! Multiple package instances within a single package slot have been pulled
!!! into the dependency graph, resulting in a slot conflict:

dev-lang/perl:0

  (dev-lang/perl-5.16.3::gentoo, installed) pulled in by
dev-lang/perl:0/5.16=[-build(-)] required by 
(net-analyzer/net-snmp-5.7.3_pre3::gentoo, installed)

  (dev-lang/perl-5.18.2-r1::gentoo, ebuild scheduled for merge) pulled in by
=dev-lang/perl-5.18* required by 
(virtual/perl-File-Spec-3.400.0-r2::gentoo, installed)
(and 1 more with the same problem)



I can't follow this.  For one thing net-snmp-5.7.3_pre3.ebuild does not
contain the string lang and I looked at all occurrences of perl in
the ebuild and don't see how dev-lang/perl-5.16.3 is required.

--  The second conflict is 

 * Error: The above package list contains packages which cannot be
 * installed at the same time on the same system.

  (media-video/ffmpeg-1.2.6-r1::gentoo, ebuild scheduled for merge) pulled in by

=media-video/ffmpeg-1.2.6-r1:0[abi_x86_32(-)?,abi_x86_64(-)?,abi_x86_x32(-)?,abi_mips_n32(-)?,abi_mips_n64(-)?,abi_mips_o32(-)?,abi_ppc_32(-)?,abi_ppc_64(-)?,abi_s390_32(-)?,abi_s390_64(-)?]
 (=media-video/ffmpeg-1.2.6-r1:0[abi_x86_64(-)]) required by 
(media-plugins/gst-plugins-ffmpeg-0.10.13_p201211-r2::gentoo, ebuild scheduled 
for merge)

  (media-video/libav-9.14::gentoo, installed) pulled in by

=media-video/libav-9.12[abi_x86_32(-)?,abi_x86_64(-)?,abi_x86_x32(-)?,abi_mips_n32(-)?,abi_mips_n64(-)?,abi_mips_o32(-)?,abi_ppc_32(-)?,abi_ppc_64(-)?,abi_s390_32(-)?,abi_s390_64(-)?,X?,encode?,gsm?,jpeg2k?,mp3?,opus?,sdl?,speex?,theora?,threads?,truetype?,vaapi?,vdpau?,x264?]
 (=media-video/libav-9.12[abi_x86_64(-),X,encode,mp3,sdl,truetype,x264]) 
required by (virtual/ffmpeg-9-r1::gentoo, installed)

---

I don't understand this since it looks to me that virtual/ffmpeg-9-r1
wants EITHER media-video/ffmpeg OR media-video/libav.  So if
gst-plugins-ffmpeg requires ffmpeg, why isn't virtual/ffmpeg satisfied,
i.e., why does it require that media-video/libav remain installed?

-- The entire emerge command and output follows
Note that I have
EMERGE_DEFAULT_OPTS=--ask --deep --tree --verbose --jobs --load-average=5

e6510 ~ # emerge --update --changed-use --deep  @world

These are the packages that would be merged, in reverse order:

Calculating dependencies... done!
[nomerge   ] gnome-base/gnome-3.12.0:2.0  USE=bluetooth cdr classic cups 
extras -accessibility 
[nomerge   ]  gnome-base/gnome-extra-apps-3.12.0:3.0  USE=games shotwell 
tracker 
[ebuild U  ]   media-video/cheese-3.12.2-r1:0/7 [3.12.2:0/7] 
USE=introspection {-test} 0 kB
[nomerge   ] app-office/libreoffice-bin-4.2.5.2  USE=gnome (-aqua) -java 
-kde PYTHON_SINGLE_TARGET=python2_7 -python3_3 (-python3_4) 
PYTHON_TARGETS=python2_7 python3_3 (-python3_4) 
[ebuild   R]  dev-libs/redland-1.0.16  USE=berkdb xml -iodbc -mysql -odbc 
-postgres -sqlite -static-libs (-ssl%*) 1,587 kB
[ebuild U  ] app-admin/syslog-ng-3.4.8 [3.4.7] USE=ipv6 pcre ssl systemd 
tcpd -amqp% -caps -dbi -geoip -json -mongodb -pacct% -smtp -spoof-source 3,096 
kB
[ebuild UD ] www-client/firefox-24.7.0 [30.0] USE=alsa dbus gstreamer jit 
libnotify minimal pulseaudio startup-notification -bindist -custom-cflags 
-custom-optimization -debug (-pgo) (-selinux) -system-cairo -system-icu 
-system-jpeg -system-sqlite {-test} -wifi (-hardened%) LINGUAS=-af -ak% -ar 
-as -ast -be -bg -bn_BD -bn_IN -br -bs -ca -cs -csb -cy -da -de -el -en_GB 
-en_ZA -eo -es_AR -es_CL -es_ES -es_MX -et -eu -fa -fi -fr -fy_NL -ga_IE -gd 
-gl -gu_IN -he -hi_IN -hr -hu -hy_AM -id -is -it -ja -kk -km -kn -ko -ku -lg% 
-lt -lv -mai -mk -ml -mr -nb_NO -nl -nn_NO -nso% -or -pa_IN -pl -pt_BR -pt_PT 
-rm -ro -ru -si -sk -sl -son -sq -sr -sv_SE -ta -ta_LK% -te -th -tr -uk -vi 
-zh_CN -zh_TW -zu (-xh%) 117,162 kB
[ebuild U  ] www-servers/apache-2.2.27-r4:2 [2.2.27:2] USE=ldap ssl -debug 
-doc (-selinux) -static -suexec -threads APACHE2_MODULES=actions alias 
auth_basic auth_digest authn_alias authn_anon authn_dbm authn_default 
authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner 
authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache 
env expires ext_filter file_cache filter headers include info log_config logio 
mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id 
userdir usertrack vhost_alias -asis -authn_dbd -cern_meta -charset_lite -dbd 
-dumpio -ident -imagemap -log_forensic -proxy -proxy_ajp -proxy_balancer 
-proxy_connect -proxy_ftp -proxy_http -proxy_scgi -reqtimeout -substitute 
-version APACHE2_MPMS=-event -itk -peruser 

Re: [gentoo-user] unclear (to me) errors from portage

2014-08-07 Thread Gevisz
On Thu, 07 Aug 2014 23:33:34 -0400
gottl...@nyu.edu wrote:

 I was away for two weeks and now one of my systems cannot be updated
 due to  conflicts.  The entire (long) emerge output is at the end of
 this msg.
 
 
 --  The first conflict is ---
 
 
 !!! Multiple package instances within a single package slot have been
 pulled !!! into the dependency graph, resulting in a slot conflict:
 
 dev-lang/perl:0
 
   (dev-lang/perl-5.16.3::gentoo, installed) pulled in by
 dev-lang/perl:0/5.16=[-build(-)] required by
 (net-analyzer/net-snmp-5.7.3_pre3::gentoo, installed)
 
   (dev-lang/perl-5.18.2-r1::gentoo, ebuild scheduled for merge)
 pulled in by =dev-lang/perl-5.18* required by
 (virtual/perl-File-Spec-3.400.0-r2::gentoo, installed) (and 1 more
 with the same problem)
 
 
 
 I can't follow this.  For one thing net-snmp-5.7.3_pre3.ebuild does
 not contain the string lang and I looked at all occurrences of
 perl in the ebuild and don't see how dev-lang/perl-5.16.3 is
 required.
 
 --  The second conflict is 
 
  * Error: The above package list contains packages which cannot be
  * installed at the same time on the same system.
 
   (media-video/ffmpeg-1.2.6-r1::gentoo, ebuild scheduled for merge)
 pulled in by
 
 =media-video/ffmpeg-1.2.6-r1:0[abi_x86_32(-)?,abi_x86_64(-)?,abi_x86_x32(-)?,abi_mips_n32(-)?,abi_mips_n64(-)?,abi_mips_o32(-)?,abi_ppc_32(-)?,abi_ppc_64(-)?,abi_s390_32(-)?,abi_s390_64(-)?]
 (=media-video/ffmpeg-1.2.6-r1:0[abi_x86_64(-)]) required by
 (media-plugins/gst-plugins-ffmpeg-0.10.13_p201211-r2::gentoo,
 ebuild scheduled for merge)
 
   (media-video/libav-9.14::gentoo, installed) pulled in by
 
 =media-video/libav-9.12[abi_x86_32(-)?,abi_x86_64(-)?,abi_x86_x32(-)?,abi_mips_n32(-)?,abi_mips_n64(-)?,abi_mips_o32(-)?,abi_ppc_32(-)?,abi_ppc_64(-)?,abi_s390_32(-)?,abi_s390_64(-)?,X?,encode?,gsm?,jpeg2k?,mp3?,opus?,sdl?,speex?,theora?,threads?,truetype?,vaapi?,vdpau?,x264?]
 (=media-video/libav-9.12[abi_x86_64(-),X,encode,mp3,sdl,truetype,x264])
 required by (virtual/ffmpeg-9-r1::gentoo, installed)
 
 ---
 
 I don't understand this since it looks to me that virtual/ffmpeg-9-r1
 wants EITHER media-video/ffmpeg OR media-video/libav.  So if
 gst-plugins-ffmpeg requires ffmpeg, why isn't virtual/ffmpeg
 satisfied, i.e., why does it require that media-video/libav remain
 installed?
 
 -- The entire emerge command and output follows
 Note that I have
 EMERGE_DEFAULT_OPTS=--ask --deep --tree --verbose --jobs
 --load-average=5
 
 e6510 ~ # emerge --update --changed-use --deep  @world
 
 These are the packages that would be merged, in reverse order:
 
 Calculating dependencies... done!
 [nomerge   ] gnome-base/gnome-3.12.0:2.0  USE=bluetooth cdr
 classic cups extras -accessibility [nomerge   ]
 gnome-base/gnome-extra-apps-3.12.0:3.0  USE=games shotwell
 tracker [ebuild U  ]   media-video/cheese-3.12.2-r1:0/7
 [3.12.2:0/7] USE=introspection {-test} 0 kB [nomerge   ]
 app-office/libreoffice-bin-4.2.5.2  USE=gnome (-aqua) -java -kde
 PYTHON_SINGLE_TARGET=python2_7 -python3_3 (-python3_4)
 PYTHON_TARGETS=python2_7 python3_3 (-python3_4) [ebuild   R]
 dev-libs/redland-1.0.16  USE=berkdb xml -iodbc -mysql -odbc
 -postgres -sqlite -static-libs (-ssl%*) 1,587 kB [ebuild U  ]
 app-admin/syslog-ng-3.4.8 [3.4.7] USE=ipv6 pcre ssl systemd tcpd
 -amqp% -caps -dbi -geoip -json -mongodb -pacct% -smtp -spoof-source
 3,096 kB [ebuild UD ] www-client/firefox-24.7.0 [30.0] USE=alsa
 dbus gstreamer jit libnotify minimal pulseaudio startup-notification
 -bindist -custom-cflags -custom-optimization -debug (-pgo) (-selinux)
 -system-cairo -system-icu -system-jpeg -system-sqlite {-test} -wifi
 (-hardened%) LINGUAS=-af -ak% -ar -as -ast -be -bg -bn_BD -bn_IN
 -br -bs -ca -cs -csb -cy -da -de -el -en_GB -en_ZA -eo -es_AR -es_CL
 -es_ES -es_MX -et -eu -fa -fi -fr -fy_NL -ga_IE -gd -gl -gu_IN -he
 -hi_IN -hr -hu -hy_AM -id -is -it -ja -kk -km -kn -ko -ku -lg% -lt
 -lv -mai -mk -ml -mr -nb_NO -nl -nn_NO -nso% -or -pa_IN -pl -pt_BR
 -pt_PT -rm -ro -ru -si -sk -sl -son -sq -sr -sv_SE -ta -ta_LK% -te
 -th -tr -uk -vi -zh_CN -zh_TW -zu (-xh%) 117,162 kB [ebuild U  ]
 www-servers/apache-2.2.27-r4:2 [2.2.27:2] USE=ldap ssl -debug -doc
 (-selinux) -static -suexec -threads APACHE2_MODULES=actions alias
 auth_basic auth_digest authn_alias authn_anon authn_dbm authn_default
 authn_file authz_dbm authz_default authz_groupfile authz_host
 authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock
 deflate dir disk_cache env expires ext_filter file_cache filter
 headers include info log_config logio mem_cache mime mime_magic
 negotiation rewrite setenvif speling status unique_id userdir
 usertrack vhost_alias -asis -authn_dbd -cern_meta -charset_lite -dbd
 -dumpio -ident -imagemap -log_forensic -proxy -proxy_ajp