Re: [gmx-users] Karplus parameterization

2009-03-12 Thread David van der Spoel

XAvier Periole wrote:


Dears,

Anyone knows which parameterization of the Karplus equation
is implemented in g_chi ?


Hm, I'm surprised to see this isn't in the source code with a 
please_cite call. My bad, this is at least one of them.


@Article{ Vuister93,
  author =   "G. W. Vuister and A. Bax",
  title ="Quantitative {J} Correlation: A New Approach for
  Measuring Homonuclear Three-Bond
  {J(H$^N$-H$^{\alpha}$)} Coupling Constants in
  {$^{15}$N}-Enriched Proteins",
  journal =  BTjacs,
  year = 1993,
  volume =   115,
  pages ="7772-"
}
Smith, L.J., Sutcliffe, M.J., Redfield, C., and Dobson, C.M. 1991.
Analysis of φ and χ1 torsion angles for hen lysozyme in solution
from 1H NMR spin–spin coupling constants. Biochemistry, 30:
986–996.

@Article{ LSmith96,
  author =   "L. J. Smith and K. A. Bolin and H. Schwalbe and
  M. W. Mac{A}rthur and J. M. Thornton and
  C. M. Dobson",
  title ="Analysis of Main Chain Torsion Angles in Proteins:
  Prediction of {NMR} Coupling Constants for Native
  and Random Coil Conformations",
  journal =  BTjmb,
  year = 1996,
  volume =   255,
  pages ="494-506"
}




Best,
XAvier.


XAvier Periole
MD-group
University of Groningen
The Netherlands
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David van der Spoel, Ph.D., Professor of Biology
Molec. Biophys. group, Dept. of Cell & Molec. Biol., Uppsala University.
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[gmx-users] Karplus parameterization

2009-03-12 Thread XAvier Periole


Dears,

Anyone knows which parameterization of the Karplus equation
is implemented in g_chi ?

Best,
XAvier.


XAvier Periole
MD-group
University of Groningen
The Netherlands
___
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