[gmx-users] VDW parameters: Martini Forcefield + Implicit Solvation
Greetings, I am trying to do Martini Forcefield + Implicit solvation model for a large system and I need to supply parameters for the [ implicit_genborn_params ] section. Which I have not found. The syntax is Atomtype sar st pi gbr hct Can anybody provide me a clue about where I can find these parameters? Regards Eduardo Mendez University of Calgary -- gmx-users mailing listgmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
Re: [gmx-users] VDW parameters: Martini Forcefield + Implicit Solvation
On 1/04/2011 9:29 AM, emen...@ucalgary.ca wrote: Greetings, I am trying to do Martini Forcefield + Implicit solvation model for a large system and I need to supply parameters for the [ implicit_genborn_params ] section. Which I have not found. The syntax is Atomtype sar st pi gbr hct Can anybody provide me a clue about where I can find these parameters? Manual section 5.3.5 describes the parameters. Mark -- gmx-users mailing listgmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
[gmx-users] VDW parameters: Martini Forcefield + Implicit Solvation
I meant to say, the MARTINI parameters, regards E -- gmx-users mailing listgmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
