Re: [gmx-users] backup files

2007-03-19 Thread Ignacio Fernández Galván
 Pedro, looks like gmx-tools allways want an .extension for input
 files, so how about renaming all # files, or at least remove the last
 # ?
 
 try this: (quick and dirty)
 rename \#conf.gro.1#  #1.conf.gro   \#conf.gro.1#
 rename \#conf.tpr.1#   #1.conf.tpr   \#conf.tpr.1#
 rename \#conf.edr.1#  #1.conf.edr   \#conf.edr.1#
 rename \#conf.xtc.1#  #1.conf.xtc   \#conf.xtc.1#
 rename \#conf.trr.1#   #1.conf.trr   \#conf.trr.1#

For renaming a single file, use mv, rename can rename multiple
files (some additional escaping might be needed):

(remove all the .1#)
rename .1#  \#conf*

(change the initial # into #1.)
rename # #1. \#conf*



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Re: [gmx-users] backup files

2007-03-18 Thread Diego Enry

Pedro, looks like gmx-tools allways want an .extension for input
files, so how about renaming all # files, or at least remove the last
# ?

try this: (quick and dirty)
rename \#conf.gro.1#  #1.conf.gro   \#conf.gro.1#
rename \#conf.tpr.1#   #1.conf.tpr   \#conf.tpr.1#
rename \#conf.edr.1#  #1.conf.edr   \#conf.edr.1#
rename \#conf.xtc.1#  #1.conf.xtc   \#conf.xtc.1#
rename \#conf.trr.1#   #1.conf.trr   \#conf.trr.1#


On 3/17/07, Pedro Alexandre de Araújo Gomes Lapido Loureiro
[EMAIL PROTECTED] wrote:

Thank you,

but only for the record, in my system I have to type

cp \#conf.gro#  good.gro
(Note the  \ )

Regards.

Pedro.

2007/3/17, Mark Abraham [EMAIL PROTECTED]:
  Thanks for you reply but, I'm afraid it doesn't work with me!
 
  In fact, if I write more \#conf.gro# I can read from this file.
 
  However, when using it as input for gromacs utilities the programs
  complain
  of input error.

 cp #conf.gro# good.gro


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--
Diego Enry B. Gomes
Laboratório de Modelagem e Dinamica Molecular
Universidade Federal do Rio de Janeiro - Brasil.
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Re: [gmx-users] backup files

2007-03-17 Thread Mark Abraham
 Thanks for you reply but, I'm afraid it doesn't work with me!

 In fact, if I write more \#conf.gro# I can read from this file.

 However, when using it as input for gromacs utilities the programs
 complain
 of input error.

cp #conf.gro# good.gro


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[gmx-users] backup files

2007-03-16 Thread Pedro Alexandre de Araújo Gomes Lapido Loureiro

Hi,

maybe this is a linux-related question (sorry!) but how do I read from the
backup files, such as #ener.edr# or  #traj.xtc#?

Regards,

Pedro.
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Re: [gmx-users] backup files

2007-03-16 Thread Mark Abraham
 Hi,

 maybe this is a linux-related question (sorry!) but how do I read from the
 backup files, such as #ener.edr# or  #traj.xtc#?

The same way you do any other file. :-) You can even give them as input to
gromacs utilities.

Mark

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