Re: [gmx-users] bug in g_msd

2012-03-15 Thread Justin A. Lemkul



Gavin Melaugh wrote:

Hi all

Is there a bug with g_msd when using the -mol flag. I have my own
program that calculates the MSD. If I compare it with the gromacs
utility for one system the curves are the exact same, however when I
compare with another system th curves are very different. Someone else
mentioned something similar a few days ago, so I was just wondering if
this was the case.



Sounds like this is a known issue:

http://redmine.gromacs.org/issues/774

-Justin

--


Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin


--
gmx-users mailing listgmx-users@gromacs.org
http://lists.gromacs.org/mailman/listinfo/gmx-users
Please search the archive at 
http://www.gromacs.org/Support/Mailing_Lists/Search before posting!
Please don't post (un)subscribe requests to the list. Use the 
www interface or send it to gmx-users-requ...@gromacs.org.

Can't post? Read http://www.gromacs.org/Support/Mailing_Lists


[gmx-users] bug in g_msd

2012-03-15 Thread Gavin Melaugh
Hi all

Is there a bug with g_msd when using the -mol flag. I have my own
program that calculates the MSD. If I compare it with the gromacs
utility for one system the curves are the exact same, however when I
compare with another system th curves are very different. Someone else
mentioned something similar a few days ago, so I was just wondering if
this was the case.

Cheers

Gavin
-- 
gmx-users mailing listgmx-users@gromacs.org
http://lists.gromacs.org/mailman/listinfo/gmx-users
Please search the archive at 
http://www.gromacs.org/Support/Mailing_Lists/Search before posting!
Please don't post (un)subscribe requests to the list. Use the 
www interface or send it to gmx-users-requ...@gromacs.org.
Can't post? Read http://www.gromacs.org/Support/Mailing_Lists