[gmx-users] g_energy has no bond entry when MD analysis

2007-10-24 Thread xi zhao
Dear friends:
  when my MD was finished and I want to analyse the bond energy of the protein 
,but g_energy did not show bond entry: the first entry is angle? When energy 
miniumzation  finished,g_energy did show G96 bond. why?
  Please help me! 
  Thank you! 

   
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Re: [gmx-users] g_energy has no bond entry when MD analysis

2007-10-24 Thread Mark Abraham
 Dear friends:
   when my MD was finished and I want to analyse the bond energy of the
 protein ,but g_energy did not show bond entry: the first entry is angle?
 When energy miniumzation  finished,g_energy did show G96 bond. why?

So, when did you use bond length constraints? What effect would they have?

Mark

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回复: Re: [gmx-users] g_energy has no bond entry when MD analysis

2007-10-24 Thread xi zhao

Yes, I use bond constraints! 
Mark Abraham [EMAIL PROTECTED] 写道:   Dear friends:
 when my MD was finished and I want to analyse the bond energy of the
 protein ,but g_energy did not show bond entry: the first entry is angle?
 When energy miniumzation finished,g_energy did show G96 bond. why?

So, when did you use bond length constraints? What effect would they have?

Mark

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