[gmx-users] indexing largest cluster with g_clustsize

2009-07-16 Thread Dmitri Dubov
Dear gmx'ers!

One more question on g_clustsize routine:
It produces an index file with the atom numbers of largest cluster. But how it 
works in an evaporating system where the number of clustered molecules reduces 
greatly through the trajectory? What frame the maxclust.ndx file concerns to?
-- 
Regards
 Dmitri  mailto:ddu...@ngs.ru___
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Re: [gmx-users] indexing largest cluster with g_clustsize

2009-07-16 Thread Ran Friedman
Hi Dmitri,
It's the last frame - the file is written after all frames are read and
dealt with.
Best regards,
Ran

Dmitri Dubov wrote:

 Dear gmx'ers!


 One more question on g_clustsize routine:

 It produces an index file with the atom numbers of largest cluster.
 But how it works in an evaporating system where the number of
 clustered molecules reduces greatly through the trajectory? What frame
 the maxclust.ndx file concerns to?

 -- 

 Regards

  Dmitri  mailto:ddu...@ngs.ru

 

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--
Ran Friedman
Postdoctoral Fellow
Computational Structural Biology Group (A. Caflisch)
Department of Biochemistry
University of Zurich
Winterthurerstrasse 190
CH-8057 Zurich, Switzerland
Tel. +41-44-639
Email: r.fried...@bioc.unizh.ch
Skype: ran.friedman
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