[gmx-users] problem with compiling fftw

2011-10-27 Thread Sanku M
Hi,
  When trying to compile fftw3.3.3 in our cluster I got following error. 
Apparently, it try to guess the build-type by trying to create a directory in 
scratch. I am not sure why it will try to create a directory there and then it 
fails. I was wondering whether there is any way-out to avoid this issue. Is 
there any way in a machine to know its build type and if so, what is the option 
in fftw to mention the directory.
Below is the error message.
Sanku

./configure --prefix=/home/joe/UTIL/fftw/ CC=gcc  --enable-float
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether to enable maintainer-specific portions of Makefiles... no
checking build system type... mkdir: cannot create directory 
`/scratch/cg29917-21909': Permission denied
mkdir: cannot create directory `/scratch/cg-29917': Permission denied
config.guess: cannot create a temporary directory in /scratch
configure: error: cannot guess build type; you must specify one
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Re: [gmx-users] problem with compiling fftw

2011-10-27 Thread Mark Abraham

On 28/10/2011 12:25 PM, Sanku M wrote:

Hi,
  When trying to compile fftw3.3.3 in our cluster I got following 
error. Apparently, it try to guess the build-type by trying to create 
a directory in scratch. I am not sure why it will try to create a 
directory there and then it fails. I was wondering whether there is 
any way-out to avoid this issue. Is there any way in a machine to know 
its build type and if so, what is the option in fftw to mention the 
directory.


There are OS-based ways for a program to ask for the name of a safe 
unique temporary filename for it to use. It's possible this kind of 
mechanism is serving a location for a file at which users don't have 
write permissions. I'd take this up with your system admins.


Mark


Below is the error message.
Sanku

./configure --prefix=/home/joe/UTIL/fftw/ CC=gcc  --enable-float
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether to enable maintainer-specific portions of Makefiles... no
checking build system type... mkdir: cannot create directory 
`/scratch/cg29917-21909': Permission denied

mkdir: cannot create directory `/scratch/cg-29917': Permission denied
config.guess: cannot create a temporary directory in /scratch
configure: error: cannot guess build type; you must specify one





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