Re: [gmx-users] reg mopac gromacs installation
dear Mark Abraham sir, pardon for the disturbence through mail thank you for your atonce reply herafter i will contact u throug the gmx mailing list. please sorry for the inconvience. i am in budding stage in gromacs MD research --- On Tue, 4/8/09, Mark Abraham mark.abra...@anu.edu.au wrote: From: Mark Abraham mark.abra...@anu.edu.au Subject: Re: [gmx-users] reg mopac gromacs installation To: Gromacs Users gmx-users@gromacs.org Date: Tuesday, 4 August, 2009, 5:10 AM vidhya sankar wrote: i think it either needs fortran or c compiler am i correct . please mail me Please leave GROMACS correspondence on the mailing list. Yes, you will need either a FORTRAN or C compiler. Please read the documentation to find out. I don't know which, and don't care to find out :-) Mark --- On Mon, 3/8/09, Mark Abraham mark.abra...@anu.edu.au wrote: From: Mark Abraham mark.abra...@anu.edu.au Subject: Re: [gmx-users] reg mopac gromacs installation To: Discussion list for GROMACS users gmx-users@gromacs.org Date: Monday, 3 August, 2009, 5:15 AM vidhya sankar wrote: dear gmx user , i am doing QM/MM using MOPAC/GROMACS when i configure mopac7-1.10 the software using for the interface with gromacs by ../configure command i got error as follows configure error: f2c or g2c library cannot be found . solution for the above error would be appericiated reply please thanks in advance Solution: install f2c or g2c. Google is your friend. Probably the installation documentation for this port of GROMACS should talk about this issue. Mark ___ gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php Love Cricket? Check out live scores, photos, video highlights and more. Click here http://cricket.yahoo.com ___ gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php Love Cricket? Check out live scores, photos, video highlights and more. Click here http://cricket.yahoo.com___ gmx-users mailing listgmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php
Re: [gmx-users] reg mopac gromacs installation
vidhya sankar wrote: i think it either needs fortran or c compiler am i correct . please mail me Please leave GROMACS correspondence on the mailing list. Yes, you will need either a FORTRAN or C compiler. Please read the documentation to find out. I don't know which, and don't care to find out :-) Mark --- On Mon, 3/8/09, Mark Abraham mark.abra...@anu.edu.au wrote: From: Mark Abraham mark.abra...@anu.edu.au Subject: Re: [gmx-users] reg mopac gromacs installation To: Discussion list for GROMACS users gmx-users@gromacs.org Date: Monday, 3 August, 2009, 5:15 AM vidhya sankar wrote: dear gmx user , i am doing QM/MM using MOPAC/GROMACS when i configure mopac7-1.10 the software using for the interface with gromacs by ../configure command i got error as follows configure error: f2c or g2c library cannot be found . solution for the above error would be appericiated reply please thanks in advance Solution: install f2c or g2c. Google is your friend. Probably the installation documentation for this port of GROMACS should talk about this issue. Mark ___ gmx-users mailing listgmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php Love Cricket? Check out live scores, photos, video highlights and more. Click here http://cricket.yahoo.com ___ gmx-users mailing listgmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php
Re: [gmx-users] reg mopac gromacs installation
vidhya sankar wrote: dear gmx user , i am doing QM/MM using MOPAC/GROMACS when i configure mopac7-1.10 the software using for the interface with gromacs by ../configure command i got error as follows configure error: f2c or g2c library cannot be found . solution for the above error would be appericiated reply please thanks in advance Solution: install f2c or g2c. Google is your friend. Probably the installation documentation for this port of GROMACS should talk about this issue. Mark ___ gmx-users mailing listgmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php
[gmx-users] reg mopac gromacs installation
dear gmx user , i am doing QM/MM using MOPAC/GROMACS when i configure mopac7-1.10 the software using for the interface with gromacs by ../configure command i got error as follows configure error: f2c or g2c library cannot be found . solution for the above error would be appericiated reply please thanks in advance c.text+0x160): undefined reference to `__ctype_b' /usr/lib/gcc/i386-redhat-linux/4.3.0/../../../libmopac.a(lread.o): In function `e_rsle': (.text+0x21f): undefined reference to `__ctype_b' /usr/lib/gcc/i386-redhat-linux/4.3.0/../../../libmopac.a(lread.o): In function `e_rsle': (.text+0x296): undefined reference to `__ctype_b' /usr/lib/gcc/i386-redhat-linux/4.3.0/../../../libmopac.a(lread.o): In function `e_rsle': (.text+0x2d0): undefined reference to `__ctype_b' /usr/lib/gcc/i386-redhat-linux/4.3.0/../../../libmopac.a(lread.o): In function `e_rsle': (.text+0x8b2): undefined reference to `__ctype_b' /usr/lib/gcc/i386-redhat-linux/4.3.0/../../../libmopac.a(lread.o):(.text+0xb05): more undefined references to `__ctype_b' follow collect2: ld returned 1 exit status make[3]: *** [grompp] Error 1 make[3]: Leaving directory `/root/gromacs-4.0.5/src/kernel' make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory `/root/gromacs-4.0.5/src' make[1]: *** [all] Error 2 make[1]: Leaving directory `/root/gromacs-4.0.5/src' make: *** [all-recursive] Error 1 Love Cricket? Check out live scores, photos, video highlights and more. Click here http://cricket.yahoo.com___ gmx-users mailing listgmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php
[gmx-users] reg Mopac/gromacs installation
dear sir, Thanks in advance i installed fedora core 9 linux OS but when i try to install the MOPAC7 package by typing command ./configure in command prompt .it checks every thing and finally end in error as follows cannot find f2c or g2c library files from where could i get this library files for fc-9 OS how to rectify the error? could you please send me hyperlink of the website where the compatible library files are available i am expecting your reply soon See the Web#39;s breaking stories, chosen by people like you. Check out Yahoo! Buzz. http://in.buzz.yahoo.com/___ gmx-users mailing listgmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php
Re: [gmx-users] reg Mopac/gromacs installation
vidhya sankar wrote: dear sir, Thanks in advance i installed fedora core 9 linux OS but when i try to install the MOPAC7 package by typing command ./configure in command If installing Mopac, probably it is better to post to their forum, not this one :) prompt .it checks every thing and finally end in error as follows *cannot find f2c or g2c library files* from where could i get this library files for fc-9 OS how to rectify the error? Have you tried a Google search, or the Mopac forums? There are answers in both of these locations. -Justin could you please send me hyperlink of the website where the compatible library files are available i am expecting your reply soon See the Web's breaking stories, chosen by people like you. Check out Yahoo! Buzz http://in.rd.yahoo.com/tagline_buzz_1/*http://in.buzz.yahoo.com/. ___ gmx-users mailing listgmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php -- Justin A. Lemkul Ph.D. Candidate ICTAS Doctoral Scholar Department of Biochemistry Virginia Tech Blacksburg, VA jalemkul[at]vt.edu | (540) 231-9080 http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin ___ gmx-users mailing listgmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php
[gmx-users] reg MOPAC/gromacs installation
Dear sir/Madam Thanks in Advance i am sorry for asking the same question again reg MOPAC/gromacs installation. i did dos2linux coversion in two different online sever but when i use output of one server i got the error as follows when i type ./configure command in command prompt : command not found1: ../configure: line 40: syntax error near unexpected token `LANG' ../configure: line 40: ` LANG LANGUAGE LC_ADDRESS LC_ALL LC_COLLATE LC_CTYPE LC_'DENTIFICATION \ but when i use output of another server i got the following error checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes : command not foundissing: line 3: : command not foundissing: line 5: : command not foundissing: line 9: : command not foundissing: line 14: : command not foundissing: line 19: : command not foundissing: line 24: : command not foundissing: line 29: 'root/mopac7-1.10/missing: line 47: syntax error near unexpected token `in 'root/mopac7-1.10/missing: line 47: `case $1 in configure: WARNING: `missing' script is too old or missing checking for gawk... gawk checking whether make sets $(MAKE)... yes configure: error: cannot run /bin/sh ./config.sub Own a website.Get an unlimited package.Pay next to nothing.*Go to http://in.business.yahoo.com/___ gmx-users mailing listgmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php
[gmx-users] reg MOPAC/gromacs installation
Dear sir/Madam Thanks in Advance i am sorry for asking the same question again reg MOPAC/gromacs installation. i did dos2linux coversion in two different online sever but when i use output of one server i got the error as follows when i type ./configure command in command prompt : command not found1: ../configure: line 40: syntax error near unexpected token `LANG' ../configure: line 40: ` LANG LANGUAGE LC_ADDRESS LC_ALL LC_COLLATE LC_CTYPE LC_'DENTIFICATION \ but when i use output of another server i got the following error checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes : command not foundissing: line 3: : command not foundissing: line 5: : command not foundissing: line 9: : command not foundissing: line 14: : command not foundissing: line 19: : command not foundissing: line 24: : command not foundissing: line 29: 'root/mopac7-1.10/missing: line 47: syntax error near unexpected token `in 'root/mopac7-1.10/missing: line 47: `case $1 in configure: WARNING: `missing' script is too old or missing checking for gawk... gawk checking whether make sets $(MAKE)... yes configure: error: cannot run /bin/sh ./config.sub s/Personal/justin ___ gmx-users mailing list gmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php Now surf faster and smarter ! Check out the new Firefox 3 - Yahoo! Edition http://downloads.yahoo.com/in/firefox/?fr=om_email_firefox___ gmx-users mailing listgmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php
Re: [gmx-users] reg MOPAC/gromacs installation
vidhya sankar wrote: Dear sir/Madam Thanks in Advance i am sorry for asking the same question again reg MOPAC/gromacs installation. i did dos2linux coversion in two different online sever but when i use output of one server i got the error as follows when i type ./configure command in command prompt *: command not found1: * *./configure: line 40: syntax error near unexpected token `LANG'* *./configure: line 40: ` LANG LANGUAGE LC_ADDRESS LC_ALL LC_COLLATE LC_CTYPE LC_'DENTIFICATION \* ** but when i use output of another server i got the following error checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes : command not foundissing: line 3: : command not foundissing: line 5: : command not foundissing: line 9: : command not foundissing: line 14: : command not foundissing: line 19: : command not foundissing: line 24: : command not foundissing: line 29: 'root/mopac7-1.10/missing: line 47: syntax error near unexpected token `in 'root/mopac7-1.10/missing: line 47: `case $1 in configure: WARNING: `missing' script is too old or missing checking for gawk... gawk checking whether make sets $(MAKE)... yes configure: error: cannot run /bin/sh ./config.sub Your shells and/or machines seem to be horribly old, broken or both. In extremis, re-install a new operating system and try again :-) Mark ___ gmx-users mailing listgmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php
