[GOAL] Surveying the Sound of One Hand Clapping

2013-12-01 Thread Stevan Harnad
*Open Access ≠ Open Access Journals*

In AAAS's 
ScienceInsiderhttp://news.sciencemag.org/scientific-community/2013/11/scientists-ambivalent-about-open-access,
Jocelyn Kaiser reports the results of yet another
surveyhttp://www.sciencemag.org/site/special/scicomm/ showing
that researchers want Open Access but do not provide it.

But if you ask the wrong questions, you get the wrong answers.

Open Access (OA) means free online access to peer-reviewed journal articles.

OA provides for researchers the advantage of maximizing the access, uptake,
usage, applications, progress and impact of their research findings by
making them accessible to all potential users, not just subscribers. Most
researchers already know this.

There are two ways for researchers to provide OA:

--- (1) either researchers publish in an OA journal, which makes its
article free for all online (Gold OA);

--- (2) or researchers publish in their journal of choice but also
self-archive their final peer-reviewed draft in their institutional OA
repository, which makes it free for all online (Green OA).

Gold OA has all the disadvantages mentioned and not mentioned by Kaiser:
(i) not the author's established journal of choice; (iii) may have low or
no peer-review standards (iii) may cost the author money to publish, out of
scarce research funds.

That explains why most authors want OA but few provide Gold OA (as this
latest Science survey yet again found).

About twice as many authors provide Green OA as Gold OA, but that's still
very few: So what are the reasons authors don't provide Green OA?

Authors don't provide Green OA because they (i) fear it might be illegal;
(ii) fear it might jeopardize publishing in their journal of choice; (iii)
fear it might jeopardize peer-reviewed publishing itself.

The difference between the reasons why authors don't provide Gold OA and
the reasons they don't provide Green OA is that the former are valid
reasons and the latter are not.

But the solution is already being implemented worldwide, although Kaiser
does not mention it:

Research funders and research institutions worldwide are mandating
(requiring) Green OA.

Over 60% of journals already formally endorse immediate, unembargoed Green
OA.

For the remaining 40% of articles, published in journals that embargo Green
OA for 6, 12, 24 months or longer, they can be deposited as Closed Access
(CA) instead of OA duriing the embargo: institutional repositories have a
request-a-copy Button that allows users to request and authors to provide
an email copy of any CA deposit with one click each (Almost-OA).

So Green OA mandates can provide at least 60% immediate OA plus 40%
Almost-OA. (This unused potential for immediate Green-OA and Almost-OA has
long been known and noted -- most recently by Laakso
(2014)http://hanken.halvi.helsinki.fi/portal/files/2323707/Lakso_2014_Green_OA_Policies_Accepted_Version_.pdf
).

And if Green OA mandates eventually make subscriptions unsustainable --
because Green OA from OA institutional repositories makes it possible for
institutions to cancel their subscriptions -- then journals will cut costs
(leaving all access-provision and archiving to the Green OA repositories),
downsize and convert to Gold OA, providing peer review at a fair,
affordable, sustainable price, paid for out of the institutions'
subscription cancellation savings (not authors' research funds).

So mandatory Green OA is (i) legal, (ii) does not jeopardize authors'
publishing in their journal of choice and (iii) does not jeopardize
publishing or peer review:

Mandating Green OA merely provides Green OA (and Almost-OA) until journals
convert to affordable Gold OA so that (i) authors can continue to publish
in their established journal of choice; (iii) need not risk low or no
peer-review standards (iii) need not pay to publish out of scarce research
funds.

It would have been more complicated for the Science survey to explain the
Green/Gold contingencies before asking the questions, but it would have
been more informative than asking, as this survey did, What is the Sound
of One Hand Clapping?

The outcome would have been that the vast majority of researchers will
willingly comply with a Green OA mandate, exactly as had already been found
by Swan  
Brownhttp://sitecore.jisc.ac.uk/uploaded_documents/Open%20Access%20Self%20Archiving-an%20author%20study.pdf's
classic international JISC survey in 2005.
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[GOAL] Re: [Open-access] Re: Re: Fight Publishing Lobby's Latest FIRST Act to Delay OA - Nth Successor to PRISM, RWA etc.

2013-12-01 Thread Bjoern Brembs
On Saturday, November 30, 2013, 12:30:54 AM, you wrote:

 The technology to do all of this already exists. Most of
 the STEM metadata you describe is actually directly
 available in Medline, and the core parts can be used as
 per the open biblio principles. Crawling the websites is
 already possible using pubcrawler and other tools, and
 finding out what their stated licence status is can be
 done with howopenisit (although more often than not the
 answer is not properly defined).

Precisely!!

 However the hard part is not building or running these
 things or collecting all the data, but sustaining it in
 and imbuing it with credibility.

Totally agreed!

 For example I can run a server with all this on it at not
 too much personal expense, but who would treat it as a
 serious source? Scaling up to handle a large amount of
 users and providing a good service does cost money, which
 I (we) could probably find a way to fund - but even then,
 we still have to solve that credibility problem. It has to
 be known by those in or entering the field that this is
 where you go to find this stuff - as opposed to the
 current go to the library and follow all the rules approach.

What we should be able to do right now (and for some of that we're applying for 
grants as I type this), is to start building the infrastructure for software 
and data. This will provide the opportunity to develop standards for how to 
make the databases for text (repositories), data and software interoperable.

Simultaneously, these standards need t be communicated and adopted by a 
critical mass of institutions.

But perhaps most importantly, the institutions participating in crawling and 
harvesting all our literature need to develop a way of searching, filtering and 
sorting not only the existing literature, but especially the incoming, new 
literature in a way that is superior to what we have now. Given that there 
isn't really a single place where you can exhaustively search the literature, 
the first part should be easy (existing literature).

For the second part, (incoming, newly published literature), we're currently in 
the process of developing an RSS reader which is tailor-made for scientists.

Thus, if there is a superior way to handle the literature, that outcompetes 
everything we have right now (again, not too difficult), people will go there, 
simple because they save time and effort that way.

The next step will be an authoring tool that allows collaborative writing with 
scientific referencing and peer-review. there are currently several initiatives 
developing that environment. Once this is running, submission will be as simple 
as hitting 'submit'. Everybody who has ever submitted to a journal knows how 
people will flock to a service that allows submission with a single click.

Thus, I agree, this will be the important part, but offering a superior way 
should do most of the work - just look at how quickly GScholar was accepted.

Cheers,


Bjoern





-- 
Björn Brembs
-
http://brembs.net
Neurogenetics
Universität Regensburg
Germany


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[GOAL] Of Course Immediate OA Generates More Citations Than Delayed Access

2013-12-01 Thread Stevan Harnad
Laakso  Björk 
(2013)http://hanken.halvi.helsinki.fi/portal/files/1311951/laakso_bj_rk_delay_preprint.pdf
compare
the citation impact of immediate Gold OA with delayed Gold and toll-access.
They find that delayed-Gold journals average twice as many citations per
article as toll-access journals and three times as many as immediate-Gold
journals.

This is based on comparisons between different journals. But journals
differ in both subject matter and quality -- and one of the ways to try to
equate them to make them comparable for quality is to equate them for
impact.

So if journals are not equated for subject matter and quality, one is
comparing apples and oranges. But if immediate Gold OA, delayed-Gold and
toll-access journals are equated for impact, one can't compare impact for
delayed vs. immediate Gold -- in fact one can't compare the journals for
citation impact at al!!

A feasible way to compare immediate-OA with delayed-access and toll-access
is via Green OA based on within-journal instead of between-journal
comparisons, by comparing articles published within the same journal and
year. To do this one needs both the date of publication and the date the
article was made Green OA.

It is impossible to get the OA date for webwide deposits in general, but
for repository deposits it is possible.

We do have some very preliminary and partial
datahttp://eprints.soton.ac.uk/358882/ from
the University of Minho repository, but the sample is still too small to do
within-journal comparisons. Immediate Green OA articles do have more
citations on average than Delayed Access articles (see Figures 2c and 3c)
despite the availability of the automated Almost-OA Button during the
delay period, but these citation counts are just absolute ones, rather than
relative to within-journal matched toll-access controls. Hence these are
likewise still comparisons between apples and oranges. (Note also that the
large number of undeposited articles is likewise unmatched, and not based
on their respective within-journal matched toll-access controls.)

The sample will grow as the number of Green OA mandates and repository
deposits worldwide grows. The vast unused potential for immediate Green-OA
and Almost-OA has long been known and noted -- most recently by Laakso
(2014)http://hanken.halvi.helsinki.fi/portal/files/2323707/Lakso_2014_Green_OA_Policies_Accepted_Version_.pdf
.

Gargouri, Yassine, Larivière, Vincent  Harnad, Stevan (2013) Ten-year
Analysis of University of Minho Green OA Self-Archiving
Mandatehttp://eprints.soton.ac.uk/358882/ (in
E Rodrigues, Ed. *title to come)*

Laakso, M.,  Björk, B. C. (2013). Delayed open access: An overlooked
high-impact category of openly available scientific
literaturehttp://hanken.halvi.helsinki.fi/portal/files/1311951/laakso_bj_rk_delay_preprint.pdf
. *Journal of the American Society for Information Science and Technology*.

Laakso, M (2014) Green open access policies of scholarly journal
publishers: a study of what, when, and where self-archiving is
allowedhttp://hanken.halvi.helsinki.fi/portal/files/2323707/Lakso_2014_Green_OA_Policies_Accepted_Version_.pdf.
Scientometrics (in press)
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[GOAL] Re: [Open-access] Re: Re: Fight Publishing Lobby's Latest FIRST Act to Delay OA - Nth Successor to PRISM, RWA etc.

2013-12-01 Thread Peter Murray-Rust
I agree with what Bjoern and Mark have said. We have the imperative to
develop a new set of tools and most is in place.

For my part I am launching the Content Mine over these current days. The
goal is simple - to extract 100,000,000 million facts from the scholarly
scientific literature. See

https://vimeo.com/78353557 (5 minutes video).
http://www.slideshare.net/petermurrayrust/the-content-mine-presented-at-uksg

and innumerable current blogs on
http://blogs.ch.cam.ac.uk/pmr/

I would very much welcome help. I have been offered some from outside
academia - it would be nice to have some academics who also believed in
liberation.

This is not vapourware. I demo'ed this at OKFN/Open Science in Oxford last
Wednesday. I am starting with Open Access papers, such as PLoSONE and
when tested there will move to other outlets. These papers can be queried
for a wide range of scientific facts such as species (where we start),
chemicals, sequences, geolocations, identifiers, phylogenetic trees, etc.
We have means of publishing this and means of capturing it. Everything -
code, protocols, extractions, stores, etc. are fully Open (OKD compliant).

This has the potential to act as a semantic current-awareness system and
also as a scientific search engine. At present there is no Open search
engine for science, except Wikipedia. As Bjoern and Mark have made clear we
must create one - and rapidly. Else we shall remain completely reliant on
the charity of mega-corporations - do we trust them?

I have applied for a personal grant to work on this. I will be delighted to
work with any others outside or inside academia - all my software is Open
for anyone to re-use without my permission. Only by making science
immediately Open (OKD-compliant) at the time it is published do we have
Open Access in the true (BOAI) sense of the word.








On Sun, Dec 1, 2013 at 2:27 PM, Bjoern Brembs b.bre...@gmail.com wrote:

 On Saturday, November 30, 2013, 12:30:54 AM, you wrote:

  The technology to do all of this already exists. Most of
  the STEM metadata you describe is actually directly
  available in Medline, and the core parts can be used as
  per the open biblio principles. Crawling the websites is
  already possible using pubcrawler and other tools, and
  finding out what their stated licence status is can be
  done with howopenisit (although more often than not the
  answer is not properly defined).

 Precisely!!

  However the hard part is not building or running these
  things or collecting all the data, but sustaining it in
  and imbuing it with credibility.

 Totally agreed!

  For example I can run a server with all this on it at not
  too much personal expense, but who would treat it as a
  serious source? Scaling up to handle a large amount of
  users and providing a good service does cost money, which
  I (we) could probably find a way to fund - but even then,
  we still have to solve that credibility problem. It has to
  be known by those in or entering the field that this is
  where you go to find this stuff - as opposed to the
  current go to the library and follow all the rules approach.

 What we should be able to do right now (and for some of that we're
 applying for grants as I type this), is to start building the
 infrastructure for software and data. This will provide the opportunity to
 develop standards for how to make the databases for text (repositories),
 data and software interoperable.

 Simultaneously, these standards need t be communicated and adopted by a
 critical mass of institutions.

 But perhaps most importantly, the institutions participating in crawling
 and harvesting all our literature need to develop a way of searching,
 filtering and sorting not only the existing literature, but especially the
 incoming, new literature in a way that is superior to what we have now.
 Given that there isn't really a single place where you can exhaustively
 search the literature, the first part should be easy (existing literature).

 For the second part, (incoming, newly published literature), we're
 currently in the process of developing an RSS reader which is tailor-made
 for scientists.

 Thus, if there is a superior way to handle the literature, that
 outcompetes everything we have right now (again, not too difficult), people
 will go there, simple because they save time and effort that way.

 The next step will be an authoring tool that allows collaborative writing
 with scientific referencing and peer-review. there are currently several
 initiatives developing that environment. Once this is running, submission
 will be as simple as hitting 'submit'. Everybody who has ever submitted to
 a journal knows how people will flock to a service that allows submission
 with a single click.

 Thus, I agree, this will be the important part, but offering a superior
 way should do most of the work - just look at how quickly GScholar was
 accepted.

 Cheers,


 Bjoern





 --
 Björn Brembs