Re: [gpc-informatics] #266: CDM V3 Development for Phase 2

2015-04-27 Thread GPC Informatics
#266: CDM V3 Development for Phase 2
--+
 Reporter:  campbell  |   Owner:  preeder
 Type:  design-issue  |  Status:  assigned
 Priority:  major |   Milestone:  data-domains3
Component:  data-stds |  Resolution:
 Keywords:  CDM V3|  Blocked By:
 Blocking:|
--+
Changes (by dconnolly):

 * owner:  campbell@… = preeder
 * status:  new = assigned


Comment:

 Phillip, do I understand correctly that you plan to attend the one on
 Wednesday?


  - PCORnet CDM v3.0: Stakeholder Input Session (1 of 2)
\\Tuesday, April 28, 2015 10:00 AM-11:30 AM
  - PCORnet CDM v3.0: Stakeholder Input Session (2 of 2)
\\Wednesday, April 29, 2015 12:00 PM-1:30 PM

--
Ticket URL: 
http://informatics.gpcnetwork.org/trac/Project/ticket/266#comment:1
gpc-informatics http://informatics.gpcnetwork.org/
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Re: [gpc-informatics] #158: usable view of LOINC lab terms

2015-04-27 Thread GPC Informatics
#158: usable view of LOINC lab terms
-+
 Reporter:  rwaitman |   Owner:  dconnolly
 Type:  enhancement  |  Status:  accepted
 Priority:  major|   Milestone:  data-domains3
Component:  data-stds|  Resolution:
 Keywords:   |  Blocked By:
 Blocking:   |
-+

Comment (by dconnolly):

 In reviewing work on this at KUMC, I discovered there are no LOINC codes
 in the paths.

 Experience mapping diagnoses to CDM showed that makes life difficult. But
 perhaps relying on `c_basecode` is the cost-effective thing to do at this
 point. I'm still mulling it over.

--
Ticket URL: 
http://informatics.gpcnetwork.org/trac/Project/ticket/158#comment:31
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Re: [gpc-informatics] #270: Port Q1 QA query to Oracle

2015-04-27 Thread GPC Informatics
#270: Port Q1 QA query to Oracle
--+
 Reporter:  dconnolly |   Owner:  mikemunns
 Type:  enhancement   |  Status:  reopened
 Priority:  major |   Milestone:  data-quality3
Component:  data-sharing  |  Resolution:
 Keywords:|  Blocked By:
 Blocking:  232, 262  |
--+
Changes (by dconnolly):

 * status:  closed = reopened
 * resolution:  fixed =


Comment:

 The Apr 16 has hard-coded numerators. That makes it unsuitable for use at
 KUMC.

--
Ticket URL: 
http://informatics.gpcnetwork.org/trac/Project/ticket/270#comment:3
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REDCap version... (was Re: GPC-Dev Agenda 4-21)

2015-04-27 Thread Thomas F Mish


Looking on the REDCap website, the most recent LTS versions is 6.0.24. 
There have been no LTS releases that support this Survey Code extension 
to REDCap that I can see. If past history is any indicator, we might not 
see a Long-Term-Support release of REDCap that supports this 
functionality until Aug or Sept this year.


-TM

On 4/21/2015 10:42 AM, Thomas F Mish wrote:

Wisconsin is at 5.9.mumble...

I don't currently have an ETA for getting to 6.1.x.  We tend to stick 
with LTS releases by policy. Without digging up my REDCap wiki 
username and password, does anyone know what version that would be?


-TM

On 4/21/2015 9:09 AM, Munns, Michael B wrote:


UNMC 6.4.4

Michael Munns

Database Analyst

402-559-3821

*From:*gpc-dev-boun...@listserv.kumc.edu 
[mailto:gpc-dev-boun...@listserv.kumc.edu] *On Behalf Of *Bos, Angela

*Sent:* Monday, April 20, 2015 5:44 PM
*To:* Dan Connolly; Apathy, Nate; gpc-dev@listserv.kumc.edu
*Subject:* RE: GPC-Dev Agenda 4-21

Sorry for the late request, but could we add the following topic for 
the obesity survey:


What version of Redcap are you running? How soon could your site 
potentially achieve 6.1.x?


We would like to use Redcap “access code” functionality introduced in 
6.1.0. Used in conjunction with participant lists, it allows a user 
to enter a general survey URL, then requires them to enter a 
non-case-sensitive 9-character access code to go to their unique 
survey link.


-Angela | UTHSCSA

*From:*gpc-dev-boun...@listserv.kumc.edu 
mailto:gpc-dev-boun...@listserv.kumc.edu 
[mailto:gpc-dev-boun...@listserv.kumc.edu] *On Behalf Of *Dan Connolly

*Sent:* Monday, April 20, 2015 3:30 PM
*To:* Apathy,Nate; gpc-dev@listserv.kumc.edu 
mailto:gpc-dev@listserv.kumc.edu

*Subject:* RE: GPC-Dev Agenda 4-21

Thanks for getting the ball rolling, Nate. I went over our business 
and made some adjustments.


Note in particular that I dropped items where I couldn't find an 
update shared with the group.  Reminder: if anyone wants something on 
the agenda, please send mail or update a ticket before 10am Monday. 
You can, of course, ask to have something added when we review the 
agenda at the beginning of the call, but things work better if 
materials are available in advance.


1.Convene, take roll, review records and plan next meeting.

a.​Meeting ID and access code: 817-393-381 
https://global.gotomeeting.com/meeting/join/817393381; call +1 
(571) 317-3131


b.roll: all 10DevTeams 
https://informatics.gpcnetwork.org/trac/Project/wiki/DevTeamsrepresented? 



i.KUMC, CMH, UIOWA, WISC, MCW, MCRF, UMN, UNMC, UTHSCSA, UTSW, (MU), (IU)

ii.Reminder - put institution after your name on the GoToMeeting 
(preferences)


c.meeting notes (#12 
https://informatics.gpcnetwork.org/trac/Project/ticket/12): 
previous notes OK? today's scribe: Nate A (Cerner/CMH) comments on 
the agenda? /chair dropped items where no update was available as of 
~/T-24hrs


i.recent tickets opened/closed FYI:

1.#165: 
https://informatics.gpcnetwork.org/trac/Project/ticket/165PopMedNet 
@ UTSW - closed


2.#270 http://informatics.gpcnetwork.org/trac/Project/ticket/270- 
Port Q1 QA query to Oracle opened


3.note also recent ticket comments report 
https://informatics.gpcnetwork.org/trac/Project/report/13


d.Next Meeting April 28th: scribe?

2.#78 Shared GPC RxNORM/NDFRT medications ontology 
https://informatics.gpcnetwork.org/trac/Project/ticket/78re-opened; 
also #236 https://informatics.gpcnetwork.org/trac/Project/ticket/236


a.Nate sent list of non-SCDF codes 
http://listserv.kumc.edu/pipermail/gpc-dev/2015q2/001525.htmlto group


1.#158 Usable LOINC Labs - March 27 comment 
https://informatics.gpcnetwork.org/trac/Project/ticket/158#comment:28proposes 
that Jan 19 details 
https://informatics.gpcnetwork.org/trac/Project/ticket/158#comment:20suffice


a.KUMC’s experience is positive so far, though we haven’t released

b.is what’s on babel consistent with Jan 19 details?

1.milestone:data-quality3 
https://informatics.gpcnetwork.org/trac/Project/milestone/data-quality3


a./#270/(Port Q1 QA query to Oracle) closed 
https://informatics.gpcnetwork.org/trac/Project/ticket/270#comment:2


1.milestone:bc-survey-cohort-def (depgraph 
https://informatics.gpcnetwork.org/trac/Project/depgraph/ticket/227):


a.#271 
https://informatics.gpcnetwork.org/trac/Project/ticket/271IRB-wait


b.#264 
https://informatics.gpcnetwork.org/trac/Project/ticket/264confirm 
governance and workflow: ~7 sites responded


1.Milestone: obesity-survey-def 
https://informatics.gpcnetwork.org/trac/Project/milestone/obesity-survey-def


a.#252 test results from wisc 
https://informatics.gpcnetwork.org/trac/Project/ticket/252#comment:5


1.milestone:cohort-char1 
https://informatics.gpcnetwork.org/trac/Project/milestone/cohort-char1


a.#258 
https://informatics.gpcnetwork.org/trac/Project/ticket/258volunteer 
to take a whack at breast cancer treatment from NAACCR?


1.#242 https://informatics.gpcnetwork.org/trac/Project/ticket/242- 
Nate