Re: [GRASS-dev] ] LiDAR LAS import - filter on import?

2011-06-03 Thread Doug_Newcomb
>>Markus, 
   >> Were you planning on adding filtering options by return number 
on v.in.lidar?  It occurs to me that you could speed things up by only 
processing the subset of the data that you want to >>use.   I could see it 
being a useful thing to create a vector layer composed only of 1st returns 
( top of canopy/buildings)  Selecting only last returns is useful, as well 
as selecting points that >>are neither first nor last returns .   
>Yes, I was thinking of such filter options, they would be very easy and 
straightforward to implement, something like v.in.lidar 
returns=[all,first,last,middle]. Currently there is only spatial 
>filtering available.
Excellent!

>I was also thinking about an option to select columns to be imported as 
attributes, equivalent to the las2txt --parse option, but could not yet 
come up with a user-friendly solution: flags >don't work because too many 
and conflicting with existing flags, a parse option very much like the one 
of las2txt is too cryptic. I think I will settle for something like 
v.in.lidar >attributes=coords,classes,color,egde,angle,return,nreturns,... 
where the attributes option takes none, one or multiple answers

Sounds good.  That would have the advantage of "standardizing" the lidar 
attibute names for future lidar point processing modules in GRASS 

>Markus M

Doug

Doug Newcomb 
USFWS
Raleigh, NC
919-856-4520 ext. 14 doug_newc...@fws.gov
-
The opinions I express are my own and are not representative of the 
official policy of the U.S.Fish and Wildlife Service or Dept. of the 
Interior.   Life is too short for undocumented, proprietary data formats.



Markus Metz  
06/03/2011 10:36 AM

To
doug_newc...@fws.gov
cc
GRASS developers list 
Subject
Re: [GRASS-dev] ] LiDAR LAS import - filter on import?








On Fri, Jun 3, 2011 at 3:30 PM,  wrote:

Markus, 
Were you planning on adding filtering options by return number on 
v.in.lidar?  It occurs to me that you could speed things up by only 
processing the subset of the data that you want to use.   I could see it 
being a useful thing to create a vector layer composed only of 1st returns 
( top of canopy/buildings)  Selecting only last returns is useful, as well 
as selecting points that are neither first nor last returns .   

Yes, I was thinking of such filter options, they would be very easy and 
straightforward to implement, something like v.in.lidar 
returns=[all,first,last,middle]. Currently there is only spatial filtering 
available.

I was also thinking about an option to select columns to be imported as 
attributes, equivalent to the las2txt --parse option, but could not yet 
come up with a user-friendly solution: flags don't work because too many 
and conflicting with existing flags, a parse option very much like the one 
of las2txt is too cryptic. I think I will settle for something like 
v.in.lidar attributes=coords,classes,color,egde,angle,return,nreturns,... 
where the attributes option takes none, one or multiple answers

Markus M

 
I've been primarily working with aggregate las files that I have 
dumped to text ( via liblas las2txt )  and then parse via python for 
first, middle, and last  returns. I have not taken the time to learn C 
yet, but perhaps the logic of these simple python programs would be useful 
. 

The following is the python script I use to separate the last returns. 
-
 

import struct,os,string,re,binascii,glob 
infile = raw_input("Enter the aggregate lidar filename:  ") 
outfil = raw_input("Enter the ASCII output filename for the Lidar Data: 
 ") 
intxt=open(infile,'r') 
outtxt=open(outfil,'w') 
while 1: 
lasline=intxt.readline() 
lasinfo=lasline.split(',') 
if (len(lasinfo))< 5:break 
numreturns=int(lasinfo[4]) 
returnnum=int(lasinfo[5]) 
# In the data input file for this instance, the number of returns 
# is the fifth column, and the return number is the sixth column ( 
x=1,y=2,z=3,intensity=4). 
# If the value of these colums is equal, it should be the last return. 

if ( numreturns==returnnum): 
outtxt.write(lasline) 


intxt.close() 
outtxt.close() 

 

For parsing the first returns,  substitute if (returnnum==1): 

Here is the python script I use to separate out the "middle" returns. 

---
 


import struct,os,string,re,binascii,glob 
infile = raw_input("Enter the aggregate lidar fil

Re: [GRASS-dev] ] LiDAR LAS import - filter on import?

2011-06-03 Thread Markus Metz
On Fri, Jun 3, 2011 at 3:30 PM,  wrote:

>
> Markus,
> Were you planning on adding filtering options by return number on
> v.in.lidar?  It occurs to me that you could speed things up by only
> processing the subset of the data that you want to use.   I could see it
> being a useful thing to create a vector layer composed only of 1st returns (
> top of canopy/buildings)  Selecting only last returns is useful, as well as
> selecting points that are neither first nor last returns .
>
> Yes, I was thinking of such filter options, they would be very easy and
straightforward to implement, something like v.in.lidar
returns=[all,first,last,middle]. Currently there is only spatial filtering
available.

I was also thinking about an option to select columns to be imported as
attributes, equivalent to the las2txt --parse option, but could not yet come
up with a user-friendly solution: flags don't work because too many and
conflicting with existing flags, a parse option very much like the one of
las2txt is too cryptic. I think I will settle for something like v.in.lidar
attributes=coords,classes,color,egde,angle,return,nreturns,... where the
attributes option takes none, one or multiple answers

Markus M



> I've been primarily working with aggregate las files that I have
> dumped to text ( via liblas las2txt )  and then parse via python for first,
> middle, and last  returns. I have not taken the time to learn C yet, but
> perhaps the logic of these simple python programs would be useful .
>
> The following is the python script I use to separate the last returns.
>
> -
> import struct,os,string,re,binascii,glob
> infile = raw_input("Enter the aggregate lidar filename:  ")
> outfil = raw_input("Enter the ASCII output filename for the Lidar Data:  ")
> intxt=open(infile,'r')
> outtxt=open(outfil,'w')
> while 1:
> lasline=intxt.readline()
> lasinfo=lasline.split(',')
> if (len(lasinfo))< 5:break
> numreturns=int(lasinfo[4])
> returnnum=int(lasinfo[5])
> # In the data input file for this instance, the number of returns
> # is the fifth column, and the return number is the sixth column (
> x=1,y=2,z=3,intensity=4).
> # If the value of these colums is equal, it should be the last return.
> if ( numreturns==returnnum):
> outtxt.write(lasline)
>
>
> intxt.close()
> outtxt.close()
>
> 
> For parsing the first returns,  substitute if (returnnum==1):
>
> Here is the python script I use to separate out the "middle" returns.
>
>
> ---
>
> import struct,os,string,re,binascii,glob
> infile = raw_input("Enter the aggregate lidar filename:  ")
> outfil = raw_input("Enter the ASCII output filename for the Lidar Data:  ")
> intxt=open(infile,'r')
> outtxt=open(outfil,'w')
> while 1:
> lasline=intxt.readline()
> lasinfo=lasline.split(',')
> if (len(lasinfo))< 5:break
> numreturns=int(lasinfo[4])
> returnnum=int(lasinfo[5])
> # In the data input file for this instance, the number of returns
> # is the fifth column, and the return number is the sixth column (
> x=1,y=2,z=3,intensity=4).
> # If the value of these colums is equal, it should be the last return,
> so skip that entry
> # If the return number is 1 , skip that value.  All other values are
> middle canopy values,which is what we want.
> if ( numreturns==returnnum): continue
> if (returnnum==1):continue
> outtxt.write(lasline)
> intxt.close()
> outtxt.close()
>
> --
>
> I really appreciate your adding lidar data classifications from the
> standard into the program.  I haven't actually seen any lidar data with
> classifications yet, but I have hope for the future :-).
>
> As a bit of background , I'm taking the last returns and then running
> r.in.xyz to create a raster with the intensities as the z values to get
> relative soil moistures, and looking at points that are neither first nor
> last returns as a possible measure of vegetation density.  It works great
> for large datasets( > 4 billion points) , but I'm feeling the need for more
> point analysis.
>
> Doug
>
>
> Doug Newcomb
> USFWS
> Raleigh, NC
> 919-856-4520 ext. 14 doug_newc...@fws.gov
>
> -
> The opinions I express are my own and are not representative of the
> official policy of the U.S.Fish and Wildlife Service or Dept. of the
> Interior.   Life is too short for undocumented, proprietary data formats.
>
>
>  *Mark

Re: [GRASS-dev] ] LiDAR LAS import - filter on import?

2011-06-03 Thread Doug_Newcomb
Markus,
Were you planning on adding filtering options by return number on 
v.in.lidar?  It occurs to me that you could speed things up by only 
processing the subset of the data that you want to use.   I could see it 
being a useful thing to create a vector layer composed only of 1st returns 
( top of canopy/buildings)  Selecting only last returns is useful, as well 
as selecting points that are neither first nor last returns . 

I've been primarily working with aggregate las files that I have 
dumped to text ( via liblas las2txt )  and then parse via python for 
first, middle, and last  returns. I have not taken the time to learn C 
yet, but perhaps the logic of these simple python programs would be useful 
.

The following is the python script I use to separate the last returns.
-
import struct,os,string,re,binascii,glob
infile = raw_input("Enter the aggregate lidar filename:  ") 
outfil = raw_input("Enter the ASCII output filename for the Lidar Data: ")
intxt=open(infile,'r')
outtxt=open(outfil,'w')
while 1:
lasline=intxt.readline()
lasinfo=lasline.split(',')
if (len(lasinfo))< 5:break
numreturns=int(lasinfo[4])
returnnum=int(lasinfo[5])
# In the data input file for this instance, the number of returns
# is the fifth column, and the return number is the sixth column ( 
x=1,y=2,z=3,intensity=4).
# If the value of these colums is equal, it should be the last return.
if ( numreturns==returnnum):
outtxt.write(lasline)

 
intxt.close()
outtxt.close()

For parsing the first returns,  substitute if (returnnum==1):

Here is the python script I use to separate out the "middle" returns.

---

import struct,os,string,re,binascii,glob
infile = raw_input("Enter the aggregate lidar filename:  ") 
outfil = raw_input("Enter the ASCII output filename for the Lidar Data: ")
intxt=open(infile,'r')
outtxt=open(outfil,'w')
while 1:
lasline=intxt.readline()
lasinfo=lasline.split(',')
if (len(lasinfo))< 5:break
numreturns=int(lasinfo[4])
returnnum=int(lasinfo[5])
# In the data input file for this instance, the number of returns
# is the fifth column, and the return number is the sixth column ( 
x=1,y=2,z=3,intensity=4).
# If the value of these colums is equal, it should be the last return, 
so skip that entry
# If the return number is 1 , skip that value.  All other values are 
middle canopy values,which is what we want.
if ( numreturns==returnnum): continue
if (returnnum==1):continue
outtxt.write(lasline)
intxt.close()
outtxt.close()
--

I really appreciate your adding lidar data classifications from the 
standard into the program.  I haven't actually seen any lidar data with 
classifications yet, but I have hope for the future :-). 

As a bit of background , I'm taking the last returns and then running 
r.in.xyz to create a raster with the intensities as the z values to get 
relative soil moistures, and looking at points that are neither first nor 
last returns as a possible measure of vegetation density.  It works great 
for large datasets( > 4 billion points) , but I'm feeling the need for 
more point analysis.

Doug


Doug Newcomb 
USFWS
Raleigh, NC
919-856-4520 ext. 14 doug_newc...@fws.gov
-
The opinions I express are my own and are not representative of the 
official policy of the U.S.Fish and Wildlife Service or Dept. of the 
Interior.   Life is too short for undocumented, proprietary data formats.



Markus Metz  
Sent by: grass-dev-boun...@lists.osgeo.org
06/03/2011 02:20 AM

To
Hamish 
cc
GRASS developers list 
Subject
[GRASS-dev] Re: [GRASS-user] LiDAR LAS import






Hamish wrote:
> Markus Metz wrote:
[snip]
>
>> v.in.lidar is a notch faster than las2txt | v.in.ascii. And
>> easier to use...
>
> I'm not too surprised the speed difference is not so huge, as
> unix pipes are very efficient. but the easier to use thing is
> very important.. both las2txt and v.in.ascii are a bundle of
> command line switches to get right.
>
>
>> Speed comparisons:
>>
>> # sample las file with 1,287,775 points
>>
>> # with table and topology
> ...
>> real6m34.430s
> ...
>> real6m13.823s
> ...
>> # without table, with topology
> ...
>> real1m53.578s
> ...
>> real1m44.876s
>
>
> I take it that without topology it runs in just seconds?

Update: no attribute table, no topology

time las2txt -i points.las --stdout --pars