Dear users, I am currently having trouble with polymerization, joining the nearby atoms if they are within the polymerization distance. My system consists of 2 monomers. The procedure what I did was that first put monomers in the box and equilibrate it by extending box size. After I get the final box size and equilibrate the system, I have to connect monomers. This point is what I am stuck and here's my question.
Q. Is there any command or procedure that I can do with gromacs about the polymerization? If not, does anyone let me know how to do or the software doing this polymerization? Thanks in advance -- Yeongkyu Lee M.S student Department of Physics 501, Jinjudaero, Jinju, Gyeongnam <https://maps.google.com/?q=501,+Jinjudaero,+Jinju,+Gyeongnam&entry=gmail&source=g>, 52828, Korea Email: monsterpl...@gmail.com Phone: +82-10-8771-2190 -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.
