Re: [HCP-Users] 7 tesla MRI

2015-02-24 Thread Marta Moreno 
Hi Joseph,

Thanks for your recommendation! 

All the best,
___
Marta Moreno-Ortega, Ph.D.
Postdoctoral Research Fellow
Division of Experimental Therapeutics
New York State Psychiatric Institute
Department of Psychiatry
Columbia University College of Physicians and Surgeons




On Feb 24, 2015, at 1:41 PM, An Vu  wrote:

> Hi Marta,
> 
> Matt has the right idea here. To get the 1.6-2mm at 7T, I would recommend 
> using IPAT 2, partial fourier 6/8, TE ~20ms. Use the smallest MB factor that 
> will give you TR <= 1 second (should be MB <= 5).
> 
> Joseph
> 
>> On Feb 23, 2015, at 10:01 AM, hcp-users-requ...@humanconnectome.org wrote:
>> 
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>> 
>> Today's Topics:
>> 
>>  1. 7 tesla MRI (Marta Moreno)
>>  2. Re: 7 tesla MRI (Glasser, Matthew)
>>  3. Re: 7 tesla MRI (Marta Moreno)
>>  4. Re: Processing Diffusion MRI Data (Archer,Derek B)
>>  5. Re: Processing Diffusion MRI Data (Satrajit Ghosh)
>> 
>> 
>> --
>> 
>> Message: 1
>> Date: Sun, 22 Feb 2015 20:26:29 -0500
>> From: Marta Moreno 
>> Subject: [HCP-Users] 7 tesla MRI
>> To: "hcp-users@humanconnectome.org" 
>> Message-ID: <68a764ca-d62d-42cf-87ed-c9eb4be92...@icloud.com>
>> Content-Type: text/plain; charset="us-ascii"
>> 
>> Hi users,
>> 
>> I am going to start acquiring data from 7 Tesla MRI (Siemens) and would like 
>> to know best option for resting state (carrying out whole brain shimming up 
>> to 2nd order). Which would be best protocol in your expert opinion? 
>> 
>> Thanks!
>> ___
>> Marta Moreno-Ortega, Ph.D.
>> Postdoctoral Research Fellow 
>> Division of Experimental Therapeutics
>> New York State Psychiatric Institute
>> Department of Psychiatry
>> Columbia University College of Physicians and Surgeons
>> 
>> 
>> 
>> 
>> -- next part --
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>>  
>> 
>> --
>> 
>> Message: 2
>> Date: Mon, 23 Feb 2015 01:37:22 +
>> From: "Glasser, Matthew" 
>> Subject: Re: [HCP-Users] 7 tesla MRI
>> To: Marta Moreno ,
>>  "hcp-users@humanconnectome.org" 
>> Message-ID: 
>> Content-Type: text/plain; charset="us-ascii"
>> 
>> An HTML attachment was scrubbed...
>> URL: 
>> http://lists.humanconnectome.org/pipermail/hcp-users/attachments/20150223/7d35a7c7/attachment-0001.html
>>  
>> 
>> --
>> 
>> Message: 3
>> Date: Sun, 22 Feb 2015 21:35:37 -0500
>> From: Marta Moreno 
>> Subject: Re: [HCP-Users] 7 tesla MRI
>> To: "Glasser, Matthew" 
>> Cc: "hcp-users@humanconnectome.org" 
>> Message-ID: <0b4de77d-556c-4ca4-99c1-50f830a4a...@icloud.com>
>> Content-Type: text/plain; charset="windows-1252"
>> 
>> Thank you very much, Matt! I am going to test both this week and chose best. 
>> Is there any other information I should be aware of in order to acquire my 
>> data best way and establish a final protocol? Will have this week for 
>> testing.
>> ___
>> Marta Moreno-Ortega, Ph.D.
>> Postdoctoral Research Fellow
>> Division of Experimental Therapeutics
>> New York State Psychiatric Institute
>> Department of Psychiatry
>> Columbia University College of Physicians and Surgeons
>> 
>> 
>> 
>> 
>> On Feb 22, 2015, at 8:37 PM, "Glasser, Matthew"  
>> wrote:
>> 
>>> I?d get the best spatial resolution you can (e.g. 2mm-1.6mm) while keeping 
>>> the TR under 1 second (with multi-band EPI).  
>>> 
>>> Peace,
>>> 
>>> Matt.
>>> 
>>> From: Marta Moreno

Re: [HCP-Users] 7 tesla MRI

2015-02-24 Thread An Vu 
Hi Marta,

Matt has the right idea here. To get the 1.6-2mm at 7T, I would recommend using 
IPAT 2, partial fourier 6/8, TE ~20ms. Use the smallest MB factor that will 
give you TR <= 1 second (should be MB <= 5).

Joseph

> On Feb 23, 2015, at 10:01 AM, hcp-users-requ...@humanconnectome.org wrote:
> 
> Send HCP-Users mailing list submissions to
>   hcp-users@humanconnectome.org
> 
> To subscribe or unsubscribe via the World Wide Web, visit
>   http://lists.humanconnectome.org/mailman/listinfo/hcp-users
> or, via email, send a message with subject or body 'help' to
>   hcp-users-requ...@humanconnectome.org
> 
> You can reach the person managing the list at
>   hcp-users-ow...@humanconnectome.org
> 
> When replying, please edit your Subject line so it is more specific
> than "Re: Contents of HCP-Users digest..."
> 
> 
> Today's Topics:
> 
>   1. 7 tesla MRI (Marta Moreno)
>   2. Re: 7 tesla MRI (Glasser, Matthew)
>   3. Re: 7 tesla MRI (Marta Moreno)
>   4. Re: Processing Diffusion MRI Data (Archer,Derek B)
>   5. Re: Processing Diffusion MRI Data (Satrajit Ghosh)
> 
> 
> --
> 
> Message: 1
> Date: Sun, 22 Feb 2015 20:26:29 -0500
> From: Marta Moreno 
> Subject: [HCP-Users] 7 tesla MRI
> To: "hcp-users@humanconnectome.org" 
> Message-ID: <68a764ca-d62d-42cf-87ed-c9eb4be92...@icloud.com>
> Content-Type: text/plain; charset="us-ascii"
> 
> Hi users,
> 
> I am going to start acquiring data from 7 Tesla MRI (Siemens) and would like 
> to know best option for resting state (carrying out whole brain shimming up 
> to 2nd order). Which would be best protocol in your expert opinion? 
> 
> Thanks!
> ___
> Marta Moreno-Ortega, Ph.D.
> Postdoctoral Research Fellow 
> Division of Experimental Therapeutics
> New York State Psychiatric Institute
> Department of Psychiatry
> Columbia University College of Physicians and Surgeons
> 
> 
> 
> 
> -- next part --
> An HTML attachment was scrubbed...
> URL: 
> http://lists.humanconnectome.org/pipermail/hcp-users/attachments/20150222/66144559/attachment-0001.html
>  
> 
> --
> 
> Message: 2
> Date: Mon, 23 Feb 2015 01:37:22 +
> From: "Glasser, Matthew" 
> Subject: Re: [HCP-Users] 7 tesla MRI
> To: Marta Moreno ,
>   "hcp-users@humanconnectome.org" 
> Message-ID: 
> Content-Type: text/plain; charset="us-ascii"
> 
> An HTML attachment was scrubbed...
> URL: 
> http://lists.humanconnectome.org/pipermail/hcp-users/attachments/20150223/7d35a7c7/attachment-0001.html
>  
> 
> --
> 
> Message: 3
> Date: Sun, 22 Feb 2015 21:35:37 -0500
> From: Marta Moreno 
> Subject: Re: [HCP-Users] 7 tesla MRI
> To: "Glasser, Matthew" 
> Cc: "hcp-users@humanconnectome.org" 
> Message-ID: <0b4de77d-556c-4ca4-99c1-50f830a4a...@icloud.com>
> Content-Type: text/plain; charset="windows-1252"
> 
> Thank you very much, Matt! I am going to test both this week and chose best. 
> Is there any other information I should be aware of in order to acquire my 
> data best way and establish a final protocol? Will have this week for testing.
> ___
> Marta Moreno-Ortega, Ph.D.
> Postdoctoral Research Fellow
> Division of Experimental Therapeutics
> New York State Psychiatric Institute
> Department of Psychiatry
> Columbia University College of Physicians and Surgeons
> 
> 
> 
> 
> On Feb 22, 2015, at 8:37 PM, "Glasser, Matthew"  
> wrote:
> 
>> I?d get the best spatial resolution you can (e.g. 2mm-1.6mm) while keeping 
>> the TR under 1 second (with multi-band EPI).  
>> 
>> Peace,
>> 
>> Matt.
>> 
>> From: Marta Moreno 
>> Date: Sunday, February 22, 2015 at 7:26 PM
>> To: "hcp-users@humanconnectome.org" 
>> Subject: [HCP-Users] 7 tesla MRI
>> 
>> Hi users,
>> 
>> I am going to start acquiring data from 7 Tesla MRI (Siemens) and would like 
>> to know best option for resting state (carrying out whole brain shimming up 
>> to 2nd order). Which would be best protocol in your expert opinion? 
>> 
>> Thanks!
>> ___
>> Marta Moreno-Ortega, Ph.D.
>> Postdoctoral Research Fellow 
>> Division of Experimental Therapeutics
>> New York State Psychiatric Institute
>> Department of Psychiatry
>> Columbia University College of Physicians and Surgeons
>> 
>> 
>> 
>> 
>> __

Re: [HCP-Users] 7 tesla MRI

2015-02-22 Thread Marta Moreno 
Thank you very much, Matt! I am going to test both this week and chose best. 
Is there any other information I should be aware of in order to acquire my data 
best way and establish a final protocol? Will have this week for testing.
___
Marta Moreno-Ortega, Ph.D.
Postdoctoral Research Fellow
Division of Experimental Therapeutics
New York State Psychiatric Institute
Department of Psychiatry
Columbia University College of Physicians and Surgeons




On Feb 22, 2015, at 8:37 PM, "Glasser, Matthew"  wrote:

> I’d get the best spatial resolution you can (e.g. 2mm-1.6mm) while keeping 
> the TR under 1 second (with multi-band EPI).  
> 
> Peace,
> 
> Matt.
> 
> From: Marta Moreno 
> Date: Sunday, February 22, 2015 at 7:26 PM
> To: "hcp-users@humanconnectome.org" 
> Subject: [HCP-Users] 7 tesla MRI
> 
> Hi users,
> 
> I am going to start acquiring data from 7 Tesla MRI (Siemens) and would like 
> to know best option for resting state (carrying out whole brain shimming up 
> to 2nd order). Which would be best protocol in your expert opinion? 
> 
> Thanks!
> ___
> Marta Moreno-Ortega, Ph.D.
> Postdoctoral Research Fellow 
> Division of Experimental Therapeutics
> New York State Psychiatric Institute
> Department of Psychiatry
> Columbia University College of Physicians and Surgeons
> 
> 
> 
> 
> ___
> HCP-Users mailing list
> HCP-Users@humanconnectome.org
> http://lists.humanconnectome.org/mailman/listinfo/hcp-users
> 
>  
> The materials in this message are private and may contain Protected 
> Healthcare Information or other information of a sensitive nature. If you are 
> not the intended recipient, be advised that any unauthorized use, disclosure, 
> copying or the taking of any action in reliance on the contents of this 
> information is strictly prohibited. If you have received this email in error, 
> please immediately notify the sender via telephone or return mail.


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Re: [HCP-Users] 7 tesla MRI

2015-02-22 Thread Glasser, Matthew 



I’d get the best spatial resolution you can (e.g. 2mm-1.6mm) while keeping the TR under 1 second (with multi-band EPI).  


Peace,


Matt.




From: Marta Moreno 
Date: Sunday, February 22, 2015 at 7:26 PM
To: "hcp-users@humanconnectome.org" 
Subject: [HCP-Users] 7 tesla MRI





Hi users,


I am going to start acquiring data from 7 Tesla MRI (Siemens) and would like to know best option for resting state (carrying out whole brain shimming up to 2nd order). Which would be best protocol in your expert opinion? 


Thanks!





___
Marta Moreno-Ortega, Ph.D.
Postdoctoral Research Fellow 
Division of Experimental Therapeutics
New York State Psychiatric Institute
Department of Psychiatry
Columbia University College of Physicians and Surgeons








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HCP-Users mailing list
HCP-Users@humanconnectome.org
http://lists.humanconnectome.org/mailman/listinfo/hcp-users





 



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