[Histonet] Re: annoying crystals on sections

2012-08-21 Thread David A. Wright
Hi Wayne  Histonet

My guess is that Wayne's crystals are Calcium phosphate - the calcium from the 
hard tap water, as described, and phosphate from phosphate buffer (sodium or 
potassium) in the solution immediately preceding the tapwater rinse. The 
variation in crystal deposition would then be in the degree each tissue/ 
organelle tends to carry over the phosphate into the tapwater wash. Just mix 
drops of the solutions together on a slide and see if crystals form.

A brief deionized rinse followed by tapwater should first remove the phosphate 
( crystals) and then allow the desired blueing. Alternatively, substitute TRIS 
or similar as the buffer in the preceding step and go directly to tapwater.

If you have valuable sections with crystals on them, you should be able to 
chelate away the deposits in an EDTA solution, then restain as needed. 
 all the best!
-David
==
David A. Wright, Ph.D.
University of Chicago Section of Neurosurgery

 Original message 
Date: Tue, 21 Aug 2012 09:44:26 -0500 (CDT)
Subject: Histonet Digest, Vol 105, Issue 25 Message: 12
Date: Tue, 21 Aug 2012 07:20:06 +0800
From: E. Wayne Johnson e...@pigsqq.org
Subject: [Histonet] annoying crystals on sections

We are having problems with crystals precipitated on our slides which are HE 
stains on tissues from pigs. Tissues are fixed in buffered formalin.  We had 
trouble months ago with formalin pigment and we had resolved that by using 
ammonia in EtOH or picric acid in EtOH.  Sometimes we receive fixed samples 
from the field that are not buffered but presently all of our tissues are 
fixed in neutral phosphate buffered formalin.

We moved the Sakura autostainer to a different location under a fume hood on a 
different floor of the building to get the solvent odor out of our work area.
Immediately we began to see a tremendous degradation in slide quality due to 
what we initially thought was formalin pigment.
We have changed all of the solutions and all of the stains.  We find that if 
we use Milli-q water instead of tap water for
rinsing (done by hand in that case) we don't see the crystals, but the eosin 
staining quality is not acceptable after rinsing in the acidic (ph ~5) Milli-Q 
water.

Our tap water is neutral to slightly alkaline and is very hard with calcium.

We do all sorts of tissues for diagnosis of pig diseases.  Sometimes the 
slides are quite acceptable but sometimes particularly when looking at small 
intestine, the crystals are very annoying.  The crystals occur randomly on the 
slide except that there is a tendency for them to be centered on nuclei 
particularly in intestinal epithelium.  The crystals are birefringent in 
polarized light but seem to be generally clear not dark like the formalin 
pigment we had seen before.  Neither ammonia nor picric acid remove these, and 
now if we use alcoholic ammonia to treat the slides, the slides come out too 
blue.  Our slides are cut at 4 to 5 microns.

Brain has the least problem, small intestine seems worst.

We have gone back and cut some blocks that previously stained beautifully with 
no pigment or precipitate problems
and those slides also now have the same problem, either crystals if washed 
with tap water, or poor eosin staining if rinsed with MilliQ water.

Our next step is to examine the slides microscopically at every step and try 
to find at which step the problem is occurring.

Any thoughts or similar experiences?

E. Wayne Johnson, DVM
Enruikang AgTech
MOA Feed Industry Centre
Beijing
--

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[Histonet] Re: annoying crystals on sections

2012-08-21 Thread E. Wayne Johnson

Thanks all for many useful and helpful suggestions
and interesting anecdotes.


E. Wayne Johnson, DVM
Enruikang AgTech
MOA Feed Industry Centre
China Agricultural University
Beijing





On 8/22/2012 5:27 AM, David A. Wright wrote:

Hi Wayne  Histonet

My guess is that Wayne's crystals are Calcium phosphate - the calcium from the 
hard tap water, as described, and phosphate from phosphate buffer (sodium or 
potassium) in the solution immediately preceding the tapwater rinse. The 
variation in crystal deposition would then be in the degree each tissue/ 
organelle tends to carry over the phosphate into the tapwater wash. Just mix 
drops of the solutions together on a slide and see if crystals form.

A brief deionized rinse followed by tapwater should first remove the phosphate 
(  crystals) and then allow the desired blueing. Alternatively, substitute 
TRIS or similar as the buffer in the preceding step and go directly to tapwater.

If you have valuable sections with crystals on them, you should be able to 
chelate away the deposits in an EDTA solution, then restain as needed.
  all the best!
-David
==
David A. Wright, Ph.D.
University of Chicago Section of Neurosurgery

 Original message 
   

Date: Tue, 21 Aug 2012 09:44:26 -0500 (CDT)
Subject: Histonet Digest, Vol 105, Issue 25 Message: 12
Date: Tue, 21 Aug 2012 07:20:06 +0800
From: E. Wayne Johnsone...@pigsqq.org
Subject: [Histonet] annoying crystals on sections

We are having problems with crystals precipitated on our slides which are HE 
stains on tissues from pigs. Tissues are fixed in buffered formalin.  We had 
trouble months ago with formalin pigment and we had resolved that by using ammonia 
in EtOH or picric acid in EtOH.  Sometimes we receive fixed samples from the field 
that are not buffered but presently all of our tissues are fixed in neutral 
phosphate buffered formalin.

We moved the Sakura autostainer to a different location under a fume hood on a 
different floor of the building to get the solvent odor out of our work area.
Immediately we began to see a tremendous degradation in slide quality due to 
what we initially thought was formalin pigment.
We have changed all of the solutions and all of the stains.  We find that if we 
use Milli-q water instead of tap water for
rinsing (done by hand in that case) we don't see the crystals, but the eosin 
staining quality is not acceptable after rinsing in the acidic (ph ~5) Milli-Q 
water.

Our tap water is neutral to slightly alkaline and is very hard with calcium.

We do all sorts of tissues for diagnosis of pig diseases.  Sometimes the slides 
are quite acceptable but sometimes particularly when looking at small 
intestine, the crystals are very annoying.  The crystals occur randomly on the 
slide except that there is a tendency for them to be centered on nuclei 
particularly in intestinal epithelium.  The crystals are birefringent in 
polarized light but seem to be generally clear not dark like the formalin 
pigment we had seen before.  Neither ammonia nor picric acid remove these, and 
now if we use alcoholic ammonia to treat the slides, the slides come out too 
blue.  Our slides are cut at 4 to 5 microns.

Brain has the least problem, small intestine seems worst.

We have gone back and cut some blocks that previously stained beautifully with 
no pigment or precipitate problems
and those slides also now have the same problem, either crystals if washed with 
tap water, or poor eosin staining if rinsed with MilliQ water.

Our next step is to examine the slides microscopically at every step and try to 
find at which step the problem is occurring.

Any thoughts or similar experiences?

E. Wayne Johnson, DVM
Enruikang AgTech
MOA Feed Industry Centre
Beijing
--
 


   


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