Re: [Ifeffit] MBACK and Athena

2013-03-08 Thread Christopher Patridge

Cyril,

Is the copper foil a separate file or is this file imported together 
with the other scans as a reference channel?


If separate files, then there is not a clear relationship between sample 
and the foil since these were collected at different times and hence 
corrections for drift or other gremlins will not be the same.


Chris


Christopher J. Patridge, PhD
NRC Post Doctoral Research Associate
Naval Research Laboratory
Washington, DC 20375
Cell: 315-529-0501

On 3/8/2013 2:49 AM, Bajamundi Cyril wrote:

Dear Bruce,

The motivation for the question is that I'm concerned whether the shift in E 
values after calibration is conserved when the calibrated data has been saved 
in the .xmu file.
But thanks to the link you have sent to me and your previous answer in the mailing list 
archive 
http://www.mail-archive.com/ifeffit@millenia.cars.aps.anl.gov/msg02755.html 
things are a bit clearer now.
So here's a follow up. I have taken the following scans successively
Cu foil
Sample1_scan1
Sample1_scan2
Sample1_scan3
I then process the data in Athena, to begin I calibrated the Cu foil spectrum, such that 
the nice orange circle falls at the tabulated value of 8979 eV. This in turn gives some 
eshift value of -0.360. What is the relationship of this eshift to the 
spectra of  sample 1, should I apply this eshift to the scans for sample 1 as? Definitely 
I can't apply the E0.

This is still a bit vague  in my mind, even after reading the basic data 
processing section in the documentation.
Thank you in advance.

Warm regards,
Cyril

-Original Message-
From: ifeffit-boun...@millenia.cars.aps.anl.gov 
[mailto:ifeffit-boun...@millenia.cars.aps.anl.gov] On Behalf Of Bruce Ravel
Sent: Thursday, March 07, 2013 3:55 PM
To: XAFS Analysis using Ifeffit
Subject: Re: [Ifeffit] MBACK and Athena

On Thursday, March 07, 2013 12:10:26 PM Bajamundi Cyril wrote:

1. Is this procedure valid? In the sense that no information or features
of the spectrum are lost from merge.xmu to merged.xmu.mnor file.

Do you have some reason to believe that might be happening?  If so, perhaps you 
could ask a more explicit question.


2. How will the procedure Calibrate data affect this procedure?

Calibration, as it is defined in Athena, is a procedure that changes *both* the 
E0 and the Eshift values so that a selected point in the spectrum has a 
selected energy value.

   http://bruceravel.github.com/demeter/aug/process/cal.html

I'm not certain I've answered your question, but I am unclear what is 
motivating your question.

B


--
  Bruce Ravel   bravel at bnl.gov

  National Institute of Standards and Technology  Synchrotron Methods Group at 
NSLS --- Beamlines U7A, X24A, X23A2  Building 535A  Upton NY, 11973

  My homepage:http://xafs.org/BruceRavel
  EXAFS software: http://cars9.uchicago.edu/ifeffit/Demeter

___
Ifeffit mailing list
Ifeffit@millenia.cars.aps.anl.gov
http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit

___
Ifeffit mailing list
Ifeffit@millenia.cars.aps.anl.gov
http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit


___
Ifeffit mailing list
Ifeffit@millenia.cars.aps.anl.gov
http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit


[Ifeffit] Shifted data in Athena

2013-03-08 Thread George Sterbinsky
Hello,

I have attached an (D)Athena project with containing two groups, imported
as a primary data set and a reference. The groups were therefore imported
on the same energy grid. However, when plotted, the energy values of the
data points for the two groups are clearly shifted with respect to each
other. Can someone please explain the origin of this shift?

Thank you,
George


ShiftedData.prj
Description: Binary data
___
Ifeffit mailing list
Ifeffit@millenia.cars.aps.anl.gov
http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit


Re: [Ifeffit] Shifted data in Athena

2013-03-08 Thread Anatoly I Frenkel
Maybe the shift is real due to chemical shift of the sample relative to 
reference material?

Sent from my mobile phone, please forgive typos


- Reply message -
From: George Sterbinsky georgesterbin...@u.northwestern.edu
To: XAFS Analysis using Ifeffit ifeffit@millenia.cars.aps.anl.gov
Subject: [Ifeffit] Shifted data in Athena
Date: Fri, Mar 8, 2013 9:15 PM



Hello,

I have attached an (D)Athena project with containing two groups, imported as a 
primary data set and a reference. The groups were therefore imported on the 
same energy grid. However, when plotted, the energy values of the data points 
for the two groups are clearly shifted with respect to each other. Can someone 
please explain the origin of this shift?

Thank you,
George
___
Ifeffit mailing list
Ifeffit@millenia.cars.aps.anl.gov
http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit